RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Gm3250E9Q1M3 230 aa6.97□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Fxyd5P97808 178 aa6.97□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Smr3aQ61900 147 aa6.97□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Igkv2-109A0A075B5K6 120 aa6.97□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Klk12B2RVZ0 247 aa6.97□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Bri3P28662 125 aa6.97□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Timm17bQ9Z0V7 172 aa6.97□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Dmbt1Q60997 2085 aa6.97□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 P06329 120 aa6.96□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 PrcdQ00LT2 53 aa6.96□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Cdc42se2Q8BGH7 84 aa6.96□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Defb42Q8BVB5 75 aa6.96□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 4930535I16RikQ9CUI2 172 aa6.96□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Reg3dQ9QUS9 175 aa6.96□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Erdr1J3QMM0 206 aa6.96□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Smrp1Q2MH31 260 aa6.96□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Eif4ebp3Q80VV3 101 aa6.96□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 AI854703Q8BIN3 203 aa6.96□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Znf580Q9DB38 172 aa6.96□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Defa23Q5G866 93 aa6.95□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 MifP34884 115 aaKnown RBP6.95□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Ly6gP35461 111 aa6.95□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Lyrm9Q3UN90 78 aa6.95□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Smim26Q3V460 107 aa6.95□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Srsf12Q8C8K3 266 aa6.95□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Q8R092 253 aa6.95□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Igf1P05017 153 aa6.95□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 TeppQ6IMH0 216 aa6.95□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 5730596B20RikQ8BQ08 205 aa6.95□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Zfp951A0A087WRH0 451 aa6.95□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Fgf23Q9EPC2 251 aa6.95□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Tm2d2Q8R0I4 213 aa6.94□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Ighv8-11A0A075B5X4 119 aa6.94□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Gm17472A0A075B683 117 aa6.94□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Sostdc1Q9CQN4 206 aa6.94□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Igkv3-1A0A075B5P1 119 aa6.93□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 GfyJ3KML8 504 aa6.93□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Dad1P61804 113 aa6.93□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Gm28539A0A087WSL9 92 aa6.93□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Igkv4-53A0A0G2JFC6 119 aa6.93□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Gm10518F6UQQ9 182 aa6.93□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Ighv1-61P01749 117 aa6.93□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Krtap26-1Q9D7N2 215 aa6.93□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Ighv13-2A0A0A6YWN3 119 aa6.93□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Ly6c2P0CW03 131 aa6.93□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 9430069I07RikQ9CX21 111 aa6.93□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Pla2g1bQ9Z0Y2 146 aa6.93□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Igkv3-9A0A140T8P4 119 aa6.92□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Lamtor3O88653 124 aa6.92□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Ppp1r32Q148A4 427 aa6.92□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Gm9922Q8C3P1 144 aa6.92□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Cd164l2Q9D6W7 172 aa6.92□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Plac8l1Q08EJ0 177 aa6.92□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Eif4ebp1Q60876 117 aa6.92□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Naa38Q9D2U5 125 aa6.92□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 PolqQ8CGS6 2544 aa6.92□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Atp5eP56382 52 aa6.91□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Wfdc12Q9JHY3 85 aa6.91□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Nsd1O88491 2588 aaKnown RBP6.91□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Rpl39lQ9CQD0 51 aa6.91□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Prr13Q9CQJ5 137 aa6.9□□□□□ -1.3
Pcdh1-201ENSMUST00000057185 Tfpi2O35536 230 aa6.89□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 Tmem213Q08EA8 116 aa6.89□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 Higd2aQ9CQJ1 106 aa6.89□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 Notch1Q01705 2531 aa6.89□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 9530053A07RikE9PVG8 2581 aa6.89□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 Trav9n-4A0A075B631 113 aa6.89□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 Igkv4-61A0A0G2JH00 117 aa6.89□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 B230307C23RikQ8BLB2 64 aa6.89□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 OtogO55225 2910 aa6.89□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 Igkv1-117A0A140T8M0 119 aa6.88□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 A0A286YCN5 57 aa6.88□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 Gm9767G3X930 207 aa6.88□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 4930524J08RikQ9CUJ5 163 aa6.88□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 Tmem243B2RVB9 118 aa6.88□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 4930546C10RikE9Q4Y3 121 aa6.87□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 Gm10577Q3UDV9 132 aa6.87□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 Cdk2ap2Q9CPY4 127 aa6.87□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 Igkv1-88A0A140T8N1 120 aa6.87□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 Scgb1b2O35176 93 aa6.87□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 Rpl18aP62717 176 aaKnown RBP6.86□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 Helz2E9QAM5 2947 aaKnown RBP6.86□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 SbsponQ3UPR9 264 aa6.85□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 Ubl5Q9EPV8 73 aa6.85□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 Tenm3Q9WTS6 2715 aa6.85□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 Acyp1P56376 99 aa6.85□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 Gm3618D3Z4P5 127 aa6.84□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 Gm2916Q9D9B9 127 aa6.84□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 Smlr1J3QMJ4 66 aa6.84□□□□□ -1.31
Pcdh1-201ENSMUST00000057185 Igkv4-72A0A0B4J1I4 117 aa6.83□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Igkv4-58A0A0G2JGI6 119 aa6.83□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Igkv1-122A0A140T8M9 119 aa6.83□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Chchd7Q8K2Q5 85 aa6.83□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Igkv4-54A0A0G2JES9 117 aa6.83□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Gm3233E9Q2H5 230 aa6.83□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Stab1Q8R4Y4 2571 aa6.83□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Rpl28P41105 137 aaKnown RBP6.82□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 CrygaP04345 174 aa6.82□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Gm5142Q8C5X9 133 aa6.82□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Igkv8-18A0A0B4J1J3 123 aa6.82□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 102.1 ms