RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Phf3B2RQG2 2025 aaKnown RBP5.81□□□□□ -1.48
Clcn3-202ENSMUST00000056508 P01658 132 aa5.81□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Tsc2Q61037 1814 aa5.81□□□□□ -1.48
Clcn3-202ENSMUST00000056508 C130032M10RikQ8C888 123 aa5.81□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Zfp236S4R299 1847 aa5.8□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Dock8Q8C147 2100 aa5.8□□□□□ -1.48
Clcn3-202ENSMUST00000056508 AY074887Q8R5F9 132 aa5.8□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Prh1P05142 261 aa5.8□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Rai1Q61818 1889 aa5.8□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Col11a1Q61245 1804 aa5.8□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Parp4E9PYK3 1969 aa5.79□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Brca1P48754 1812 aa5.79□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Gm4707V9GXN5 68 aa5.79□□□□□ -1.48
Clcn3-202ENSMUST00000056508 MylkQ6PDN3 1941 aaKnown RBP5.79□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Ly75Q60767 1723 aa5.78□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Ralgapa1Q6GYP7 2035 aa5.78□□□□□ -1.48
Clcn3-202ENSMUST00000056508 CntrlA2AL36 2334 aa5.78□□□□□ -1.48
Clcn3-202ENSMUST00000056508 PtprdQ64487 1912 aa5.78□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Crip1P63254 77 aa5.77□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Zfhx3Q61329 3726 aa5.77□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Defb40Q70KL2 73 aa5.77□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Krtap27-1E9PX37 202 aa5.77□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Exph5Q0VAV2 1960 aa5.76□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Gm4491E0CX42 125 aa5.76□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Odf3bQ5M8M2 238 aa5.76□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Wfdc15bQ9JHY4 80 aa5.76□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Defb18Q30KP5 85 aa5.76□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Pappa2E9PZ87 1789 aa5.76□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Tanc2A2A690 1994 aa5.75□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Rtl10D3YWW5 146 aa5.75□□□□□ -1.49
Clcn3-202ENSMUST00000056508 CnfnQ6PCW6 111 aa5.75□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Gm5965D3Z724 196 aa5.74□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Ttc6G3UYY4 1857 aa5.74□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Gm17349F7BGH6 99 aa5.74□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Nckap5E9QAE1 1909 aa5.74□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Kiaa0100Q5SYL3 2234 aa5.73□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Plxnb1Q8CJH3 2119 aa5.73□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Shank3Q4ACU6 1730 aa5.73□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Lama2Q60675 3118 aaKnown RBP5.73□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Nup210lQ9D2F7 1881 aa5.73□□□□□ -1.49
Clcn3-202ENSMUST00000056508 LhbO09108 141 aa5.73□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Greb1Q3UHK3 1954 aa5.72□□□□□ -1.49
Clcn3-202ENSMUST00000056508 P01659 112 aa5.72□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Adm2Q7TNK8 150 aa5.72□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Plxna2P70207 1894 aa5.72□□□□□ -1.49
Clcn3-202ENSMUST00000056508 Krtap13O88375 197 aa5.71□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Wfdc3Q14AE4 130 aa5.71□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Myo7aP97479 2215 aa5.71□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Ubr3Q5U430 1889 aa5.71□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Znf239P24399 201 aa5.71□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Defb38Q7TNV7 63 aa5.7□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Cacna1eQ61290 2272 aa5.7□□□□□ -1.5
Clcn3-202ENSMUST00000056508 2010109I03RikQ9CQ11 111 aa5.7□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Sbf2E9PXF8 1872 aa5.7□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Col4a1P02463 1669 aa5.7□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Pcnx2Q5DU28 2122 aa5.7□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Tmem131O70472 1877 aa5.69□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Vwa8Q8CC88 1905 aa5.69□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Urb1Q571H0 2274 aaKnown RBP5.69□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Thsd7bQ6P4U0 1607 aa5.69□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Zswim8Q3UHH1 1832 aaKnown RBP5.69□□□□□ -1.5
Clcn3-202ENSMUST00000056508 RlfA2A7F4 1918 aa5.69□□□□□ -1.5
Clcn3-202ENSMUST00000056508 HelzQ6DFV5 1964 aaKnown RBP5.69□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Gm3880A0A1B0GSB3 72 aa5.69□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Mapk1ip1lQ8BH93 242 aa5.68□□□□□ -1.5
Clcn3-202ENSMUST00000056508 StrcQ8VIM6 1809 aa5.68□□□□□ -1.5
Clcn3-202ENSMUST00000056508 6030445D17RikE9Q8F9 148 aa5.68□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Polr2kQ63871 58 aa5.68□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Plxna4Q80UG2 1893 aa5.67□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Tns1E9Q0S6 1888 aaKnown RBP5.67□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Cabin1G3X8Q1 2187 aaKnown RBP5.67□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Plxna1P70206 1894 aa5.66□□□□□ -1.5
Clcn3-202ENSMUST00000056508 NynrinQ5DTZ0 1840 aa5.66□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Lama3Q61789 3330 aa5.66□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Defb9Q8R2I6 67 aa5.66□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Dmac1Q9CQ00 111 aa5.65□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Gm21798J3QNU5 87 aa5.65□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Arhgap21Q6DFV3 1944 aa5.65□□□□□ -1.5
Clcn3-202ENSMUST00000056508 Heatr5aQ5PRF0 2038 aa5.65□□□□□ -1.51
Clcn3-202ENSMUST00000056508 Med12lQ8BQM9 2157 aa5.64□□□□□ -1.51
Clcn3-202ENSMUST00000056508 Dock4P59764 1978 aa5.63□□□□□ -1.51
Clcn3-202ENSMUST00000056508 Defb45Q3V490 66 aa5.63□□□□□ -1.51
Clcn3-202ENSMUST00000056508 Gm9955Q8CEJ8 102 aa5.62□□□□□ -1.51
Clcn3-202ENSMUST00000056508 Nup210Q9QY81 1886 aaKnown RBP5.62□□□□□ -1.51
Clcn3-202ENSMUST00000056508 Col18a1P39061 1774 aa5.62□□□□□ -1.51
Clcn3-202ENSMUST00000056508 Trip12G5E870 2025 aaKnown RBP5.62□□□□□ -1.51
Clcn3-202ENSMUST00000056508 TroQ6DIC6 2087 aa5.62□□□□□ -1.51
Clcn3-202ENSMUST00000056508 Col11a2Q64739 1736 aa5.61□□□□□ -1.51
Clcn3-202ENSMUST00000056508 Col4a3Q9QZS0 1669 aa5.61□□□□□ -1.51
Clcn3-202ENSMUST00000056508 Gm37013Q8K491 104 aa5.61□□□□□ -1.51
Clcn3-202ENSMUST00000056508 ThadaA8C756 1938 aa5.6□□□□□ -1.51
Clcn3-202ENSMUST00000056508 1600014C23RikQ9DAX4 101 aa5.6□□□□□ -1.51
Clcn3-202ENSMUST00000056508 Gm9922Q8C3P1 144 aa5.6□□□□□ -1.51
Clcn3-202ENSMUST00000056508 Abca7Q91V24 2159 aa5.59□□□□□ -1.51
Clcn3-202ENSMUST00000056508 Plxna3P70208 1872 aa5.59□□□□□ -1.51
Clcn3-202ENSMUST00000056508 Notch4P31695 1964 aa5.59□□□□□ -1.51
Clcn3-202ENSMUST00000056508 Wfdc12Q9JHY3 85 aa5.59□□□□□ -1.51
Clcn3-202ENSMUST00000056508 Dscaml1Q4VA61 2053 aa5.59□□□□□ -1.52
Clcn3-202ENSMUST00000056508 Dock9Q8BIK4 2055 aa5.58□□□□□ -1.52
Clcn3-202ENSMUST00000056508 Nlrc5C3VPR6 1915 aa5.58□□□□□ -1.52
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms