RNA–Protein interactions for RNA: ENSMUST00000055353.8

Msx3-201, Transcript of Homeobox protein MSX-3, mousemouse

TSL 1 (best) BASIC

Gene Msx3, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-201ENSMUST00000055353 CdsnQ7TPC1 561 aa10.3□□□□□ -0.76
Msx3-201ENSMUST00000055353 Cd164l2Q9D6W7 172 aa10.3□□□□□ -0.76
Msx3-201ENSMUST00000055353 Ank2Q8C8R3 3898 aa10.3□□□□□ -0.76
Msx3-201ENSMUST00000055353 Ankrd11E9Q4F7 2643 aa10.3□□□□□ -0.76
Msx3-201ENSMUST00000055353 Rpl36aP83882 106 aaKnown RBP10.29□□□□□ -0.76
Msx3-201ENSMUST00000055353 Cdc42se2Q8BGH7 84 aa10.29□□□□□ -0.76
Msx3-201ENSMUST00000055353 Defb26Q30KN7 186 aa10.29□□□□□ -0.76
Msx3-201ENSMUST00000055353 1700010B08RikQ9DAI7 102 aa10.29□□□□□ -0.76
Msx3-201ENSMUST00000055353 Phpt1Q9DAK9 124 aa10.29□□□□□ -0.76
Msx3-201ENSMUST00000055353 Trav9d-4A0A0G2JG37 103 aa10.28□□□□□ -0.76
Msx3-201ENSMUST00000055353 1700011M02RikB1AX35 88 aa10.28□□□□□ -0.76
Msx3-201ENSMUST00000055353 Vpreb1P13372 142 aa10.28□□□□□ -0.76
Msx3-201ENSMUST00000055353 CirbpP60824 172 aaKnown RBP10.28□□□□□ -0.76
Msx3-201ENSMUST00000055353 Gm9922Q8C3P1 144 aa10.28□□□□□ -0.76
Msx3-201ENSMUST00000055353 Cox6cQ9CPQ1 76 aa10.27□□□□□ -0.77
Msx3-201ENSMUST00000055353 TeppQ6IMH0 216 aa10.26□□□□□ -0.77
Msx3-201ENSMUST00000055353 Krtap16-1A2A5X5 502 aa10.26□□□□□ -0.77
Msx3-201ENSMUST00000055353 Cox7a1P56392 80 aa10.26□□□□□ -0.77
Msx3-201ENSMUST00000055353 Akap13E9Q394 2776 aa10.26□□□□□ -0.77
Msx3-201ENSMUST00000055353 Fam19a1Q7TPG8 133 aa10.25□□□□□ -0.77
Msx3-201ENSMUST00000055353 Usp9yF8VPU6 2556 aa10.25□□□□□ -0.77
Msx3-201ENSMUST00000055353 Defa23Q5G866 93 aa10.25□□□□□ -0.77
Msx3-201ENSMUST00000055353 Trav11A0A0B4J1J9 114 aa10.24□□□□□ -0.77
Msx3-201ENSMUST00000055353 Lst1O08843 95 aa10.24□□□□□ -0.77
Msx3-201ENSMUST00000055353 CrygaP04345 174 aa10.24□□□□□ -0.77
Msx3-201ENSMUST00000055353 SelenowP63300 88 aa10.24□□□□□ -0.77
Msx3-201ENSMUST00000055353 Ighv1-61P01749 117 aa10.24□□□□□ -0.77
Msx3-201ENSMUST00000055353 Ndufa3Q9CQ91 84 aa10.24□□□□□ -0.77
Msx3-201ENSMUST00000055353 Gm10647E9Q8X0 124 aa10.23□□□□□ -0.77
Msx3-201ENSMUST00000055353 Defb2P82020 71 aa10.23□□□□□ -0.77
Msx3-201ENSMUST00000055353 Fxyd5P97808 178 aa10.23□□□□□ -0.77
Msx3-201ENSMUST00000055353 4930518I15RikQ3V2W7 57 aa10.23□□□□□ -0.77
Msx3-201ENSMUST00000055353 Pfn2Q9JJV2 140 aa10.23□□□□□ -0.77
Msx3-201ENSMUST00000055353 Klk11Q9QYN3 276 aa10.23□□□□□ -0.77
Msx3-201ENSMUST00000055353 Esm1Q9QYY7 184 aa10.23□□□□□ -0.77
Msx3-201ENSMUST00000055353 Ighv1-49A0A0A6YWX2 117 aa10.23□□□□□ -0.77
Msx3-201ENSMUST00000055353 Gm10772F7AIG4 85 aa10.22□□□□□ -0.77
Msx3-201ENSMUST00000055353 Unc79Q0KK59 2596 aa10.22□□□□□ -0.77
Msx3-201ENSMUST00000055353 B230359F08RikA0A0B4J1K3 109 aa10.22□□□□□ -0.77
Msx3-201ENSMUST00000055353 Spata25Q9DA57 226 aa10.22□□□□□ -0.77
Msx3-201ENSMUST00000055353 NipblQ6KCD5 2798 aaKnown RBP10.21□□□□□ -0.77
Msx3-201ENSMUST00000055353 4930546C10RikE9Q4Y3 121 aa10.21□□□□□ -0.77
Msx3-201ENSMUST00000055353 Gm20726G3UX18 150 aa10.21□□□□□ -0.78
Msx3-201ENSMUST00000055353 Brwd1Q921C3 2304 aa10.2□□□□□ -0.78
Msx3-201ENSMUST00000055353 Trav13d-4A0A0G2JFX3 110 aa10.2□□□□□ -0.78
Msx3-201ENSMUST00000055353 Gm11213A0A1B0GR83 88 aa10.2□□□□□ -0.78
Msx3-201ENSMUST00000055353 P01755 137 aa10.2□□□□□ -0.78
Msx3-201ENSMUST00000055353 Ppp1r32Q148A4 427 aa10.2□□□□□ -0.78
Msx3-201ENSMUST00000055353 Gpha2Q925Q5 128 aa10.2□□□□□ -0.78
Msx3-201ENSMUST00000055353 Bles03Q8VD62 251 aa10.19□□□□□ -0.78
Msx3-201ENSMUST00000055353 Epg5Q80TA9 2572 aa10.19□□□□□ -0.78
Msx3-201ENSMUST00000055353 E130218I03RikA0A0U1RNU5 63 aa10.19□□□□□ -0.78
Msx3-201ENSMUST00000055353 PemtQ61907 199 aa10.19□□□□□ -0.78
Msx3-201ENSMUST00000055353 Zfp462B1AWL2 2495 aaKnown RBP10.19□□□□□ -0.78
Msx3-201ENSMUST00000055353 Igkv1-35A0A0G2JDE5 120 aa10.18□□□□□ -0.78
Msx3-201ENSMUST00000055353 Igkv1-117A0A140T8M0 119 aa10.18□□□□□ -0.78
Msx3-201ENSMUST00000055353 Gm3250E9Q1M3 230 aa10.18□□□□□ -0.78
Msx3-201ENSMUST00000055353 GfyJ3KML8 504 aa10.18□□□□□ -0.78
Msx3-201ENSMUST00000055353 D130052B06RikQ3UW13 202 aa10.17□□□□□ -0.78
Msx3-201ENSMUST00000055353 Vmo1Q5SXG7 201 aa10.17□□□□□ -0.78
Msx3-201ENSMUST00000055353 Defb29Q8BGW9 78 aa10.17□□□□□ -0.78
Msx3-201ENSMUST00000055353 CrygfQ9CXV3 174 aa10.17□□□□□ -0.78
Msx3-201ENSMUST00000055353 Tomm7Q9D173 55 aa10.17□□□□□ -0.78
Msx3-201ENSMUST00000055353 Defb50Q6TU36 73 aa10.17□□□□□ -0.78
Msx3-201ENSMUST00000055353 Trav14d-3-dv8A0A075B619 120 aa10.16□□□□□ -0.78
Msx3-201ENSMUST00000055353 Prh1P05142 261 aa10.16□□□□□ -0.78
Msx3-201ENSMUST00000055353 Gm10577Q3UDV9 132 aa10.16□□□□□ -0.78
Msx3-201ENSMUST00000055353 C2cd3Q52KB6 2323 aa10.15□□□□□ -0.78
Msx3-201ENSMUST00000055353 Cd99Q8VCN6 175 aa10.15□□□□□ -0.78
Msx3-201ENSMUST00000055353 MobpQ9D2P8 170 aa10.15□□□□□ -0.78
Msx3-201ENSMUST00000055353 TrrapQ80YV3 2565 aaKnown RBP10.15□□□□□ -0.78
Msx3-201ENSMUST00000055353 Ndufa12Q7TMF3 145 aaKnown RBP10.15□□□□□ -0.79
Msx3-201ENSMUST00000055353 5730596B20RikQ8BQ08 205 aa10.15□□□□□ -0.79
Msx3-201ENSMUST00000055353 Pla2g1bQ9Z0Y2 146 aa10.15□□□□□ -0.79
Msx3-201ENSMUST00000055353 9430069I07RikQ9CX21 111 aa10.14□□□□□ -0.79
Msx3-201ENSMUST00000055353 Tm2d2Q8R0I4 213 aa10.14□□□□□ -0.79
Msx3-201ENSMUST00000055353 Lamtor3O88653 124 aa10.13□□□□□ -0.79
Msx3-201ENSMUST00000055353 Cox6b1P56391 86 aaKnown RBP10.13□□□□□ -0.79
Msx3-201ENSMUST00000055353 Chchd7Q8K2Q5 85 aa10.12□□□□□ -0.79
Msx3-201ENSMUST00000055353 Trav13-1A0A075B644 110 aa10.12□□□□□ -0.79
Msx3-201ENSMUST00000055353 Zfp951A0A087WRH0 451 aa10.12□□□□□ -0.79
Msx3-201ENSMUST00000055353 Ighv13-2A0A0A6YWN3 119 aa10.12□□□□□ -0.79
Msx3-201ENSMUST00000055353 Ly6c2P0CW03 131 aa10.12□□□□□ -0.79
Msx3-201ENSMUST00000055353 Zfand2aQ9JII7 171 aa10.12□□□□□ -0.79
Msx3-201ENSMUST00000055353 Mast4Q811L6 2618 aa10.12□□□□□ -0.79
Msx3-201ENSMUST00000055353 Igkv4-72A0A0B4J1I4 117 aa10.11□□□□□ -0.79
Msx3-201ENSMUST00000055353 Gm10549Q3URY4 149 aa10.11□□□□□ -0.79
Msx3-201ENSMUST00000055353 Myo18bE9PV66 2605 aa10.11□□□□□ -0.79
Msx3-201ENSMUST00000055353 Lage3Q9CR70 148 aa10.11□□□□□ -0.79
Msx3-201ENSMUST00000055353 4930524J08RikQ9CUJ5 163 aa10.11□□□□□ -0.79
Msx3-201ENSMUST00000055353 Dph3Q8K0W9 82 aa10.1□□□□□ -0.79
Msx3-201ENSMUST00000055353 Trav13n-2A0A0G2JF93 110 aa10.1□□□□□ -0.79
Msx3-201ENSMUST00000055353 Gm3233E9Q2H5 230 aa10.09□□□□□ -0.79
Msx3-201ENSMUST00000055353 Rpl28P41105 137 aaKnown RBP10.09□□□□□ -0.79
Msx3-201ENSMUST00000055353 Cops9Q3U898 57 aa10.09□□□□□ -0.79
Msx3-201ENSMUST00000055353 Lyrm9Q3UN90 78 aa10.09□□□□□ -0.79
Msx3-201ENSMUST00000055353 Gm11011D3Z3L9 86 aa10.09□□□□□ -0.79
Msx3-201ENSMUST00000055353 Igkv4-53A0A0G2JFC6 119 aa10.08□□□□□ -0.8
Msx3-201ENSMUST00000055353 Igkv1-99F6XWB2 120 aa10.08□□□□□ -0.8
Msx3-201ENSMUST00000055353 Defa20Q45VN2 95 aa10.08□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 56.4 ms