RNA–Protein interactions for RNA: ENSMUST00000028767.8

Rtf1-201, Transcript of RNA polymerase-associated protein RTF1 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtf1, Length 4,664 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtf1-201ENSMUST00000028767 Defb45Q3V490 66 aa10.52□□□□□ -0.73
Rtf1-201ENSMUST00000028767 P06329 120 aa10.51□□□□□ -0.73
Rtf1-201ENSMUST00000028767 Foxc1Q61572 553 aa10.51□□□□□ -0.73
Rtf1-201ENSMUST00000028767 Tmem223Q9CQE2 199 aaKnown RBP10.51□□□□□ -0.73
Rtf1-201ENSMUST00000028767 CrygfQ9CXV3 174 aa10.51□□□□□ -0.73
Rtf1-201ENSMUST00000028767 3110070M22RikQ9DAQ7 118 aa10.51□□□□□ -0.73
Rtf1-201ENSMUST00000028767 Zfhx4Q9JJN2 3550 aa10.51□□□□□ -0.73
Rtf1-201ENSMUST00000028767 Gm10647E9Q8X0 124 aa10.51□□□□□ -0.73
Rtf1-201ENSMUST00000028767 Ighv1-61P01749 117 aa10.51□□□□□ -0.73
Rtf1-201ENSMUST00000028767 Gm9747Q810H1 104 aa10.51□□□□□ -0.73
Rtf1-201ENSMUST00000028767 4930432M17RikQ3V0W9 174 aa10.5□□□□□ -0.73
Rtf1-201ENSMUST00000028767 Gm10135F6TEE5 83 aa10.5□□□□□ -0.73
Rtf1-201ENSMUST00000028767 AtrQ9JKK8 2635 aa10.5□□□□□ -0.73
Rtf1-201ENSMUST00000028767 MifP34884 115 aaKnown RBP10.5□□□□□ -0.73
Rtf1-201ENSMUST00000028767 Reg3bP35230 175 aa10.5□□□□□ -0.73
Rtf1-201ENSMUST00000028767 Cd99Q8VCN6 175 aa10.49□□□□□ -0.73
Rtf1-201ENSMUST00000028767 Ighv1-59A0A0A6YXE0 117 aa10.49□□□□□ -0.73
Rtf1-201ENSMUST00000028767 Pglyrp4Q0VB07 374 aa10.49□□□□□ -0.73
Rtf1-201ENSMUST00000028767 NipblQ6KCD5 2798 aaKnown RBP10.49□□□□□ -0.73
Rtf1-201ENSMUST00000028767 Igkv1-88A0A140T8N1 120 aa10.48□□□□□ -0.73
Rtf1-201ENSMUST00000028767 Klk11Q9QYN3 276 aa10.48□□□□□ -0.73
Rtf1-201ENSMUST00000028767 Gm10251J3QPM5 127 aa10.48□□□□□ -0.73
Rtf1-201ENSMUST00000028767 PkigO70139 76 aa10.48□□□□□ -0.73
Rtf1-201ENSMUST00000028767 Utp20Q5XG71 2788 aaKnown RBP10.47□□□□□ -0.73
Rtf1-201ENSMUST00000028767 Wdr38Q9D994 303 aa10.47□□□□□ -0.73
Rtf1-201ENSMUST00000028767 Spry2Q9QXV8 315 aa10.47□□□□□ -0.73
Rtf1-201ENSMUST00000028767 Igkv4-72A0A0B4J1I4 117 aa10.47□□□□□ -0.73
Rtf1-201ENSMUST00000028767 NpwA0A1L1STR8 176 aa10.46□□□□□ -0.74
Rtf1-201ENSMUST00000028767 Plac8l1Q08EJ0 177 aa10.46□□□□□ -0.74
Rtf1-201ENSMUST00000028767 Wfdc12Q9JHY3 85 aa10.46□□□□□ -0.74
Rtf1-201ENSMUST00000028767 Igkv4-54A0A0G2JES9 117 aa10.45□□□□□ -0.74
Rtf1-201ENSMUST00000028767 FlncQ8VHX6 2726 aaKnown RBP10.45□□□□□ -0.74
Rtf1-201ENSMUST00000028767 CdsnQ7TPC1 561 aa10.45□□□□□ -0.74
Rtf1-201ENSMUST00000028767 A0A286YCN5 57 aa10.44□□□□□ -0.74
Rtf1-201ENSMUST00000028767 Rpl18aP62717 176 aaKnown RBP10.44□□□□□ -0.74
Rtf1-201ENSMUST00000028767 Chd6A3KFM7 2711 aa10.44□□□□□ -0.74
Rtf1-201ENSMUST00000028767 BB014433Q8C5R5 389 aa10.44□□□□□ -0.74
Rtf1-201ENSMUST00000028767 Gm884A2A9H6 3643 aa10.44□□□□□ -0.74
Rtf1-201ENSMUST00000028767 Igkv1-122A0A140T8M9 119 aa10.44□□□□□ -0.74
Rtf1-201ENSMUST00000028767 Defa28D3Z1V9 94 aa10.44□□□□□ -0.74
Rtf1-201ENSMUST00000028767 Rpl39lQ9CQD0 51 aa10.44□□□□□ -0.74
Rtf1-201ENSMUST00000028767 D730001G18RikA0A087WQU7 115 aa10.43□□□□□ -0.74
Rtf1-201ENSMUST00000028767 Csmd1Q923L3 3564 aa10.43□□□□□ -0.74
Rtf1-201ENSMUST00000028767 Trbv13-2A0A140T8N6 113 aa10.43□□□□□ -0.74
Rtf1-201ENSMUST00000028767 4930546C10RikE9Q4Y3 121 aa10.43□□□□□ -0.74
Rtf1-201ENSMUST00000028767 Trav14d-3-dv8A0A075B619 120 aa10.42□□□□□ -0.74
Rtf1-201ENSMUST00000028767 AI854703Q8BIN3 203 aa10.42□□□□□ -0.74
Rtf1-201ENSMUST00000028767 Defa23Q5G866 93 aa10.42□□□□□ -0.74
Rtf1-201ENSMUST00000028767 Sfta2E9PXB6 77 aa10.42□□□□□ -0.74
Rtf1-201ENSMUST00000028767 Camk2n2Q78WH7 79 aa10.42□□□□□ -0.74
Rtf1-201ENSMUST00000028767 BC048502Q80Y74 154 aa10.42□□□□□ -0.74
Rtf1-201ENSMUST00000028767 CicQ924A2 2510 aa10.42□□□□□ -0.74
Rtf1-201ENSMUST00000028767 Rnf152Q8BG47 203 aa10.41□□□□□ -0.74
Rtf1-201ENSMUST00000028767 CrygdP04342 174 aa10.41□□□□□ -0.74
Rtf1-201ENSMUST00000028767 CrygeQ03740 174 aa10.41□□□□□ -0.74
Rtf1-201ENSMUST00000028767 Ufsp1Q9CZP0 217 aa10.4□□□□□ -0.74
Rtf1-201ENSMUST00000028767 Ubl5Q9EPV8 73 aa10.4□□□□□ -0.74
Rtf1-201ENSMUST00000028767 Gm9887F6RFI0 207 aa10.39□□□□□ -0.75
Rtf1-201ENSMUST00000028767 Gm10577Q3UDV9 132 aa10.39□□□□□ -0.75
Rtf1-201ENSMUST00000028767 CenpwQ3URR0 86 aa10.39□□□□□ -0.75
Rtf1-201ENSMUST00000028767 Cox7b2Q9D2H1 82 aa10.39□□□□□ -0.75
Rtf1-201ENSMUST00000028767 Tfpi2O35536 230 aa10.39□□□□□ -0.75
Rtf1-201ENSMUST00000028767 Dmbt1Q60997 2085 aa10.39□□□□□ -0.75
Rtf1-201ENSMUST00000028767 Defa21Q8C1P2 93 aa10.39□□□□□ -0.75
Rtf1-201ENSMUST00000028767 Smg1Q8BKX6 3658 aaKnown RBP10.38□□□□□ -0.75
Rtf1-201ENSMUST00000028767 Notch1Q01705 2531 aa10.38□□□□□ -0.75
Rtf1-201ENSMUST00000028767 Tep1P97499 2629 aa10.38□□□□□ -0.75
Rtf1-201ENSMUST00000028767 Acyp1P56376 99 aa10.38□□□□□ -0.75
Rtf1-201ENSMUST00000028767 Gm20726G3UX18 150 aa10.37□□□□□ -0.75
Rtf1-201ENSMUST00000028767 Spink4O35679 86 aa10.37□□□□□ -0.75
Rtf1-201ENSMUST00000028767 Gm3233E9Q2H5 230 aa10.37□□□□□ -0.75
Rtf1-201ENSMUST00000028767 5730596B20RikQ8BQ08 205 aa10.37□□□□□ -0.75
Rtf1-201ENSMUST00000028767 E130114P18RikF6S0S7 154 aa10.36□□□□□ -0.75
Rtf1-201ENSMUST00000028767 Krtap24-1G3X9A2 248 aa10.36□□□□□ -0.75
Rtf1-201ENSMUST00000028767 Smr3aQ61900 147 aa10.36□□□□□ -0.75
Rtf1-201ENSMUST00000028767 Cox8cA6H666 72 aa10.36□□□□□ -0.75
Rtf1-201ENSMUST00000028767 Gm17577J3QNF7 156 aa10.36□□□□□ -0.75
Rtf1-201ENSMUST00000028767 Igkv8-18A0A0B4J1J3 123 aa10.36□□□□□ -0.75
Rtf1-201ENSMUST00000028767 Gpha2Q925Q5 128 aa10.35□□□□□ -0.75
Rtf1-201ENSMUST00000028767 4930535I16RikQ9CUI2 172 aa10.35□□□□□ -0.75
Rtf1-201ENSMUST00000028767 Ubr5Q80TP3 2792 aa10.34□□□□□ -0.75
Rtf1-201ENSMUST00000028767 CrygaP04345 174 aa10.34□□□□□ -0.75
Rtf1-201ENSMUST00000028767 Ly6gP35461 111 aa10.34□□□□□ -0.75
Rtf1-201ENSMUST00000028767 Sostdc1Q9CQN4 206 aa10.33□□□□□ -0.76
Rtf1-201ENSMUST00000028767 A0A286YE02 88 aa10.33□□□□□ -0.76
Rtf1-201ENSMUST00000028767 Igf1P05017 153 aa10.32□□□□□ -0.76
Rtf1-201ENSMUST00000028767 Cdip1Q9DB75 208 aa10.32□□□□□ -0.76
Rtf1-201ENSMUST00000028767 Lypd5Q9D7Z7 256 aa10.32□□□□□ -0.76
Rtf1-201ENSMUST00000028767 B230307C23RikQ8BLB2 64 aa10.32□□□□□ -0.76
Rtf1-201ENSMUST00000028767 Zfand2aQ9JII7 171 aa10.31□□□□□ -0.76
Rtf1-201ENSMUST00000028767 TeppQ6IMH0 216 aa10.31□□□□□ -0.76
Rtf1-201ENSMUST00000028767 Gm26661M0QWV4 156 aa10.3□□□□□ -0.76
Rtf1-201ENSMUST00000028767 Ighv8-11A0A075B5X4 119 aa10.3□□□□□ -0.76
Rtf1-201ENSMUST00000028767 Inafm2A0A1L1STD6 152 aa10.3□□□□□ -0.76
Rtf1-201ENSMUST00000028767 4930524J08RikQ9CUJ5 163 aa10.3□□□□□ -0.76
Rtf1-201ENSMUST00000028767 Fgf23Q9EPC2 251 aa10.3□□□□□ -0.76
Rtf1-201ENSMUST00000028767 Gm9805F6YK59 57 aa10.3□□□□□ -0.76
Rtf1-201ENSMUST00000028767 Odf3l2Q3TZ65 277 aa10.3□□□□□ -0.76
Rtf1-201ENSMUST00000028767 Igkv4-58A0A0G2JGI6 119 aa10.29□□□□□ -0.76
Rtf1-201ENSMUST00000028767 Igkv1-117A0A140T8M0 119 aa10.29□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms