RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 Znf414Q9DCK4 299 aa13.75□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 Igkv4-61A0A0G2JH00 117 aa13.75□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 Vmo1Q5SXG7 201 aa13.75□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 Sprr1bQ62267 153 aa13.75□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 Atp5eP56382 52 aa13.73□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 Cox6b1P56391 86 aaKnown RBP13.73□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 TeppQ6IMH0 216 aa13.73□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 Igkv4-53A0A0G2JFC6 119 aa13.73□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 4930544G11RikQ9CR99 193 aa13.73□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 Zfp462B1AWL2 2495 aaKnown RBP13.72□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 Gm10647E9Q8X0 124 aa13.72□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 Tmem223Q9CQE2 199 aaKnown RBP13.72□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 Tomm7Q9D173 55 aa13.72□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 Trav13d-4A0A0G2JFX3 110 aa13.71□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 Klk9Q32M27 251 aa13.71□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 Igfn1Q3KNY0 2849 aa13.71□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 P01755 137 aa13.71□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 Znf740Q6NZQ6 180 aa13.71□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 NipblQ6KCD5 2798 aaKnown RBP13.7□□□□□ -0.22
Ccdc34-201ENSMUST00000028580 Igkv4-54A0A0G2JES9 117 aa13.7□□□□□ -0.22
Ccdc34-201ENSMUST00000028580 Ndufa12Q7TMF3 145 aaKnown RBP13.7□□□□□ -0.22
Ccdc34-201ENSMUST00000028580 Igkv1-117A0A140T8M0 119 aa13.68□□□□□ -0.22
Ccdc34-201ENSMUST00000028580 Wnk1P83741 2377 aa13.68□□□□□ -0.22
Ccdc34-201ENSMUST00000028580 Ighv1-59A0A0A6YXE0 117 aa13.68□□□□□ -0.22
Ccdc34-201ENSMUST00000028580 Pfn2Q9JJV2 140 aa13.68□□□□□ -0.22
Ccdc34-201ENSMUST00000028580 Acyp1P56376 99 aa13.67□□□□□ -0.22
Ccdc34-201ENSMUST00000028580 Pglyrp4Q0VB07 374 aa13.66□□□□□ -0.22
Ccdc34-201ENSMUST00000028580 Cmc4Q61908 68 aa13.66□□□□□ -0.22
Ccdc34-201ENSMUST00000028580 Q8R092 253 aa13.65□□□□□ -0.22
Ccdc34-201ENSMUST00000028580 4930524J08RikQ9CUJ5 163 aa13.65□□□□□ -0.22
Ccdc34-201ENSMUST00000028580 Gm10251J3QPM5 127 aa13.63□□□□□ -0.23
Ccdc34-201ENSMUST00000028580 5730596B20RikQ8BQ08 205 aa13.63□□□□□ -0.23
Ccdc34-201ENSMUST00000028580 B230359F08RikA0A0B4J1K3 109 aa13.63□□□□□ -0.23
Ccdc34-201ENSMUST00000028580 Gm16381A0A1Y7VKT9 73 aa13.62□□□□□ -0.23
Ccdc34-201ENSMUST00000028580 Mzt1Q8BUR9 78 aa13.62□□□□□ -0.23
Ccdc34-201ENSMUST00000028580 Spry2Q9QXV8 315 aa13.62□□□□□ -0.23
Ccdc34-201ENSMUST00000028580 Igkv6-13A0A0G2JGY3 119 aa13.62□□□□□ -0.23
Ccdc34-201ENSMUST00000028580 PrcdQ00LT2 53 aa13.62□□□□□ -0.23
Ccdc34-201ENSMUST00000028580 Gm904Q3V2L5 102 aa13.62□□□□□ -0.23
Ccdc34-201ENSMUST00000028580 CdsnQ7TPC1 561 aa13.62□□□□□ -0.23
Ccdc34-201ENSMUST00000028580 CrygfQ9CXV3 174 aa13.62□□□□□ -0.23
Ccdc34-201ENSMUST00000028580 CrygdP04342 174 aa13.61□□□□□ -0.23
Ccdc34-201ENSMUST00000028580 CrygeQ03740 174 aa13.61□□□□□ -0.23
Ccdc34-201ENSMUST00000028580 Ighv1-56A0A0A6YXG2 117 aa13.6□□□□□ -0.23
Ccdc34-201ENSMUST00000028580 Tcl1b3P56842 122 aa13.6□□□□□ -0.23
Ccdc34-201ENSMUST00000028580 Foxc1Q61572 553 aa13.6□□□□□ -0.23
Ccdc34-201ENSMUST00000028580 Gm3250E9Q1M3 230 aa13.6□□□□□ -0.23
Ccdc34-201ENSMUST00000028580 Igkv1-99F6XWB2 120 aa13.6□□□□□ -0.23
Ccdc34-201ENSMUST00000028580 Prr13Q9CQJ5 137 aa13.6□□□□□ -0.23
Ccdc34-201ENSMUST00000028580 Akap13E9Q394 2776 aa13.59□□□□□ -0.23
Ccdc34-201ENSMUST00000028580 Trav14d-3-dv8A0A075B619 120 aa13.59□□□□□ -0.23
Ccdc34-201ENSMUST00000028580 Trbv13-2A0A140T8N6 113 aa13.57□□□□□ -0.24
Ccdc34-201ENSMUST00000028580 Xcl1P47993 114 aa13.57□□□□□ -0.24
Ccdc34-201ENSMUST00000028580 Smim26Q3V460 107 aa13.57□□□□□ -0.24
Ccdc34-201ENSMUST00000028580 Defb29Q8BGW9 78 aa13.56□□□□□ -0.24
Ccdc34-201ENSMUST00000028580 Bles03Q8VD62 251 aa13.56□□□□□ -0.24
Ccdc34-201ENSMUST00000028580 Setd2E9Q5F9 2537 aa13.56□□□□□ -0.24
Ccdc34-201ENSMUST00000028580 Igkv1-35A0A0G2JDE5 120 aa13.55□□□□□ -0.24
Ccdc34-201ENSMUST00000028580 CicQ924A2 2510 aa13.55□□□□□ -0.24
Ccdc34-201ENSMUST00000028580 D730001G18RikA0A087WQU7 115 aa13.54□□□□□ -0.24
Ccdc34-201ENSMUST00000028580 Leap2Q91V13 76 aa13.54□□□□□ -0.24
Ccdc34-201ENSMUST00000028580 Dand5Q76LW6 185 aa13.53□□□□□ -0.24
Ccdc34-201ENSMUST00000028580 Dnal4Q9DCM4 105 aa13.52□□□□□ -0.24
Ccdc34-201ENSMUST00000028580 Igkv3-9A0A140T8P4 119 aa13.52□□□□□ -0.25
Ccdc34-201ENSMUST00000028580 Trav9n-4A0A075B631 113 aa13.51□□□□□ -0.25
Ccdc34-201ENSMUST00000028580 Trav13-1A0A075B644 110 aa13.51□□□□□ -0.25
Ccdc34-201ENSMUST00000028580 Trav3-4A0A075B654 114 aa13.51□□□□□ -0.25
Ccdc34-201ENSMUST00000028580 Gm867A0A1W2P7T4 151 aa13.51□□□□□ -0.25
Ccdc34-201ENSMUST00000028580 Dad1P61804 113 aa13.51□□□□□ -0.25
Ccdc34-201ENSMUST00000028580 Prss58Q8BW11 241 aa13.51□□□□□ -0.25
Ccdc34-201ENSMUST00000028580 Gm5142Q8C5X9 133 aa13.51□□□□□ -0.25
Ccdc34-201ENSMUST00000028580 Tmem86bQ497J1 226 aa13.5□□□□□ -0.25
Ccdc34-201ENSMUST00000028580 A830031A19RikQ8BNT5 113 aa13.5□□□□□ -0.25
Ccdc34-201ENSMUST00000028580 Csdc2Q91YQ3 154 aa13.5□□□□□ -0.25
Ccdc34-201ENSMUST00000028580 Esm1Q9QYY7 184 aa13.5□□□□□ -0.25
Ccdc34-201ENSMUST00000028580 Igkv8-18A0A0B4J1J3 123 aa13.49□□□□□ -0.25
Ccdc34-201ENSMUST00000028580 C530025M09RikF6RGA8 229 aa13.49□□□□□ -0.25
Ccdc34-201ENSMUST00000028580 Gm5153P01627 120 aa13.49□□□□□ -0.25
Ccdc34-201ENSMUST00000028580 Tcl1b5P56845 121 aa13.49□□□□□ -0.25
Ccdc34-201ENSMUST00000028580 P01819 144 aa13.48□□□□□ -0.25
Ccdc34-201ENSMUST00000028580 1810062G17RikG3X8Y2 129 aa13.48□□□□□ -0.25
Ccdc34-201ENSMUST00000028580 Hspg2Q05793 3707 aaKnown RBP13.46□□□□□ -0.25
Ccdc34-201ENSMUST00000028580 Gm3233E9Q2H5 230 aa13.46□□□□□ -0.25
Ccdc34-201ENSMUST00000028580 Ighv8-11A0A075B5X4 119 aa13.46□□□□□ -0.26
Ccdc34-201ENSMUST00000028580 Ighv2-9A0A075B5Q5 116 aa13.44□□□□□ -0.26
Ccdc34-201ENSMUST00000028580 Trav13n-2A0A0G2JF93 110 aa13.44□□□□□ -0.26
Ccdc34-201ENSMUST00000028580 Gm9903Q8C9Y8 129 aa13.44□□□□□ -0.26
Ccdc34-201ENSMUST00000028580 4930556J24RikQ9D4U7 146 aa13.44□□□□□ -0.26
Ccdc34-201ENSMUST00000028580 Higd2aQ9CQJ1 106 aa13.43□□□□□ -0.26
Ccdc34-201ENSMUST00000028580 Ifitm6A0A1B0GS75 124 aa13.43□□□□□ -0.26
Ccdc34-201ENSMUST00000028580 Prh1P05142 261 aa13.43□□□□□ -0.26
Ccdc34-201ENSMUST00000028580 CnbpP53996 178 aaKnown RBP13.43□□□□□ -0.26
Ccdc34-201ENSMUST00000028580 Ighv8-13A0A075B5Y0 101 aa13.41□□□□□ -0.26
Ccdc34-201ENSMUST00000028580 Gm10845Q3UNY9 185 aa13.41□□□□□ -0.26
Ccdc34-201ENSMUST00000028580 BB014433Q8C5R5 389 aa13.41□□□□□ -0.26
Ccdc34-201ENSMUST00000028580 Cox7bP56393 80 aa13.4□□□□□ -0.26
Ccdc34-201ENSMUST00000028580 Gm10735Q3US96 136 aa13.4□□□□□ -0.26
Ccdc34-201ENSMUST00000028580 Rpl39lQ9CQD0 51 aa13.4□□□□□ -0.26
Ccdc34-201ENSMUST00000028580 Klk11Q9QYN3 276 aa13.4□□□□□ -0.26
Ccdc34-201ENSMUST00000028580 Trav13-2A0A075B649 110 aa13.4□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 74.8 ms