RNA–Protein interactions for RNA: ENSMUST00000021956.8

Ddx41-201, Transcript of Probable ATP-dependent RNA helicase DDX41, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx41, Length 2,205 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41-201ENSMUST00000021956 Ighv8-11A0A075B5X4 119 aa12.71□□□□□ -0.37
Ddx41-201ENSMUST00000021956 Gm7849D3YX03 116 aa12.7□□□□□ -0.38
Ddx41-201ENSMUST00000021956 Defb42Q8BVB5 75 aa12.7□□□□□ -0.38
Ddx41-201ENSMUST00000021956 Gm10300Q8C8P7 189 aa12.7□□□□□ -0.38
Ddx41-201ENSMUST00000021956 Abca2P41234 2434 aa12.7□□□□□ -0.38
Ddx41-201ENSMUST00000021956 Dand5Q76LW6 185 aa12.69□□□□□ -0.38
Ddx41-201ENSMUST00000021956 Helz2E9QAM5 2947 aaKnown RBP12.69□□□□□ -0.38
Ddx41-201ENSMUST00000021956 Rif1Q6PR54 2419 aaKnown RBP12.69□□□□□ -0.38
Ddx41-201ENSMUST00000021956 Smim26Q3V460 107 aa12.69□□□□□ -0.38
Ddx41-201ENSMUST00000021956 Igkv6-13A0A0G2JGY3 119 aa12.68□□□□□ -0.38
Ddx41-201ENSMUST00000021956 Gm20726G3UX18 150 aa12.68□□□□□ -0.38
Ddx41-201ENSMUST00000021956 MobpQ9D2P8 170 aa12.68□□□□□ -0.38
Ddx41-201ENSMUST00000021956 Arid1bE9Q4N7 2244 aa12.68□□□□□ -0.38
Ddx41-201ENSMUST00000021956 Gm8439G3UWA7 96 aa12.68□□□□□ -0.38
Ddx41-201ENSMUST00000021956 Serp2Q6TAW2 65 aa12.68□□□□□ -0.38
Ddx41-201ENSMUST00000021956 Chchd7Q8K2Q5 85 aa12.68□□□□□ -0.38
Ddx41-201ENSMUST00000021956 1810062G17RikG3X8Y2 129 aa12.67□□□□□ -0.38
Ddx41-201ENSMUST00000021956 Myo18bE9PV66 2605 aa12.67□□□□□ -0.38
Ddx41-201ENSMUST00000021956 Ankrd17Q99NH0 2603 aaKnown RBP12.67□□□□□ -0.38
Ddx41-201ENSMUST00000021956 P01755 137 aa12.65□□□□□ -0.38
Ddx41-201ENSMUST00000021956 4930518I15RikQ3V2W7 57 aa12.65□□□□□ -0.38
Ddx41-201ENSMUST00000021956 Nop10Q9CQS2 64 aa12.65□□□□□ -0.38
Ddx41-201ENSMUST00000021956 Crlf1Q9JM58 425 aa12.65□□□□□ -0.38
Ddx41-201ENSMUST00000021956 Gm10772F7AIG4 85 aa12.65□□□□□ -0.38
Ddx41-201ENSMUST00000021956 Defb2P82020 71 aa12.65□□□□□ -0.38
Ddx41-201ENSMUST00000021956 Ifitm6A0A1B0GS75 124 aa12.64□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Tmem254aP0DN89 123 aa12.64□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Tmem254bP0DN90 123 aa12.64□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Tmem254cP0DN91 123 aa12.64□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Trav9d-3A0A075B695 113 aa12.64□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Gm7075D3Z497 112 aa12.64□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Igkv1-99F6XWB2 120 aa12.64□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Tmem258P61166 79 aa12.64□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Ighv1-49A0A0A6YWX2 117 aa12.63□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Defa4P28311 92 aa12.63□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Epg5Q80TA9 2572 aa12.63□□□□□ -0.39
Ddx41-201ENSMUST00000021956 CrygdP04342 174 aa12.62□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Prp2P05143 317 aa12.62□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Lypd5Q9D7Z7 256 aa12.62□□□□□ -0.39
Ddx41-201ENSMUST00000021956 B230359F08RikA0A0B4J1K3 109 aa12.61□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Gm19935A0A1B0GSF9 52 aa12.61□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Defa7P50705 93 aa12.61□□□□□ -0.39
Ddx41-201ENSMUST00000021956 PrlhG3UWC3 86 aa12.6□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Gm5142Q8C5X9 133 aa12.6□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Trav13d-4A0A0G2JFX3 110 aa12.59□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Gm7102J3QQ10 178 aa12.59□□□□□ -0.39
Ddx41-201ENSMUST00000021956 MifP34884 115 aaKnown RBP12.59□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Tcl1b3P56842 122 aa12.59□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Il19Q8CJ70 176 aa12.59□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Zfp951A0A087WRH0 451 aa12.58□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Igkv4-72A0A0B4J1I4 117 aa12.58□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Rnase1P00683 149 aa12.58□□□□□ -0.39
Ddx41-201ENSMUST00000021956 Gm43218A0A0G2JGT0 114 aa12.58□□□□□ -0.4
Ddx41-201ENSMUST00000021956 Gm10845Q3UNY9 185 aa12.58□□□□□ -0.4
Ddx41-201ENSMUST00000021956 Cystm1Q8K353 104 aa12.58□□□□□ -0.4
Ddx41-201ENSMUST00000021956 Gpha2Q925Q5 128 aa12.58□□□□□ -0.4
Ddx41-201ENSMUST00000021956 FlnbQ80X90 2602 aaKnown RBP12.57□□□□□ -0.4
Ddx41-201ENSMUST00000021956 Trav13n-2A0A0G2JF93 110 aa12.57□□□□□ -0.4
Ddx41-201ENSMUST00000021956 Defa21Q8C1P2 93 aa12.57□□□□□ -0.4
Ddx41-201ENSMUST00000021956 Tmem243B2RVB9 118 aa12.56□□□□□ -0.4
Ddx41-201ENSMUST00000021956 Samd13D3YUG0 102 aa12.56□□□□□ -0.4
Ddx41-201ENSMUST00000021956 Cox7a1P56392 80 aa12.56□□□□□ -0.4
Ddx41-201ENSMUST00000021956 Mrpl52Q9D0Y8 121 aa12.56□□□□□ -0.4
Ddx41-201ENSMUST00000021956 FlnaQ8BTM8 2647 aaKnown RBP12.55□□□□□ -0.4
Ddx41-201ENSMUST00000021956 Rpl39lQ9CQD0 51 aa12.54□□□□□ -0.4
Ddx41-201ENSMUST00000021956 Tmem223Q9CQE2 199 aaKnown RBP12.54□□□□□ -0.4
Ddx41-201ENSMUST00000021956 Gm10308Q9CVR5 141 aa12.54□□□□□ -0.4
Ddx41-201ENSMUST00000021956 Trav13-1A0A075B644 110 aa12.53□□□□□ -0.4
Ddx41-201ENSMUST00000021956 Ube2d4D3YUH6 135 aa12.53□□□□□ -0.4
Ddx41-201ENSMUST00000021956 Q9DAA7 145 aa12.53□□□□□ -0.4
Ddx41-201ENSMUST00000021956 Inafm2A0A1L1STD6 152 aa12.52□□□□□ -0.41
Ddx41-201ENSMUST00000021956 Sprr1bQ62267 153 aa12.52□□□□□ -0.41
Ddx41-201ENSMUST00000021956 Ighv10-3A0A075B5T6 119 aa12.52□□□□□ -0.41
Ddx41-201ENSMUST00000021956 GhrhP16043 103 aa12.52□□□□□ -0.41
Ddx41-201ENSMUST00000021956 Lyrm9Q3UN90 78 aa12.52□□□□□ -0.41
Ddx41-201ENSMUST00000021956 Notch3Q61982 2318 aa12.51□□□□□ -0.41
Ddx41-201ENSMUST00000021956 Ighv1-59A0A0A6YXE0 117 aa12.5□□□□□ -0.41
Ddx41-201ENSMUST00000021956 Krtap16-1A2A5X5 502 aa12.5□□□□□ -0.41
Ddx41-201ENSMUST00000021956 Gm9913Q8BQQ2 135 aa12.5□□□□□ -0.41
Ddx41-201ENSMUST00000021956 Ormdl1Q921I0 153 aa12.5□□□□□ -0.41
Ddx41-201ENSMUST00000021956 Igkv8-18A0A0B4J1J3 123 aa12.49□□□□□ -0.41
Ddx41-201ENSMUST00000021956 Tomm7Q9D173 55 aa12.49□□□□□ -0.41
Ddx41-201ENSMUST00000021956 Naa38Q9D2U5 125 aa12.49□□□□□ -0.41
Ddx41-201ENSMUST00000021956 Ank2Q8C8R3 3898 aa12.49□□□□□ -0.41
Ddx41-201ENSMUST00000021956 Ighv2-9A0A075B5Q5 116 aa12.49□□□□□ -0.41
Ddx41-201ENSMUST00000021956 Gm5153P01627 120 aa12.49□□□□□ -0.41
Ddx41-201ENSMUST00000021956 P01819 144 aa12.49□□□□□ -0.41
Ddx41-201ENSMUST00000021956 Bles03Q8VD62 251 aa12.49□□□□□ -0.41
Ddx41-201ENSMUST00000021956 Spink4O35679 86 aa12.48□□□□□ -0.41
Ddx41-201ENSMUST00000021956 Chd9Q8BYH8 2885 aa12.48□□□□□ -0.41
Ddx41-201ENSMUST00000021956 Pdzd2E9Q1M1 2796 aa12.47□□□□□ -0.41
Ddx41-201ENSMUST00000021956 Odf3l2Q3TZ65 277 aa12.47□□□□□ -0.41
Ddx41-201ENSMUST00000021956 E130208F15RikQ3UPV3 143 aa12.47□□□□□ -0.41
Ddx41-201ENSMUST00000021956 Psors1c2Q80ZC9 134 aa12.46□□□□□ -0.41
Ddx41-201ENSMUST00000021956 Ubl5Q9EPV8 73 aa12.46□□□□□ -0.42
Ddx41-201ENSMUST00000021956 Chd6A3KFM7 2711 aa12.45□□□□□ -0.42
Ddx41-201ENSMUST00000021956 Igkv8-21A0A140T8P7 120 aa12.45□□□□□ -0.42
Ddx41-201ENSMUST00000021956 Gm9903Q8C9Y8 129 aa12.45□□□□□ -0.42
Ddx41-201ENSMUST00000021956 Smlr1J3QMJ4 66 aa12.44□□□□□ -0.42
Ddx41-201ENSMUST00000021956 Rpl35aO55142 110 aa12.44□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms