RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Ighv1-85A0A075B5Y6 117 aa9.7□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Gm7102J3QQ10 178 aa9.7□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Defa16P50714 93 aa9.7□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 4930442H23RikQ9D5G7 103 aa9.7□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 B230217C12RikE9Q3Z1 139 aa9.7□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Glrp1E9Q9S8 174 aa9.7□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 SbsponQ3UPR9 264 aa9.7□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Spink13Q3UTS8 97 aa9.7□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Q9DAB9 146 aa9.7□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Morn5Q9DAI9 170 aa9.7□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Gm867A0A1W2P7T4 151 aa9.69□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 GfyJ3KML8 504 aa9.69□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 PrcdQ00LT2 53 aa9.69□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Mzt1Q8BUR9 78 aa9.69□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Gm3443F7CCV5 94 aa9.69□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Gm9767G3X930 207 aa9.69□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 PkigO70139 76 aa9.69□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Ube2d1P61080 147 aaKnown RBP9.69□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Ndufa12Q7TMF3 145 aaKnown RBP9.69□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Atp5g1Q9CR84 136 aa9.69□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Ighv13-2A0A0A6YWN3 119 aa9.68□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 SrarpQ3ULG3 163 aa9.68□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Gatd1Q8BFQ8 220 aa9.68□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Trav3-4A0A075B654 114 aa9.68□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 B230359F08RikA0A0B4J1K3 109 aa9.68□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Gm21748Q3UE70 102 aa9.68□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Igkv8-16A0A0G2JDG9 121 aa9.68□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 P01729 129 aa9.68□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Ndufa3Q9CQ91 84 aa9.68□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 E130218I03RikA0A0U1RNU5 63 aa9.67□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Igkv4-69A0A0B4J1I6 116 aa9.67□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Ighv1-11A0A0A6YWI9 117 aa9.67□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Rbmy1bQ60990 380 aa9.67□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Dmbt1Q60997 2085 aa9.67□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Tmem213Q08EA8 116 aa9.66□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Higd2aQ9CQJ1 106 aa9.66□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Cmc4Q61908 68 aa9.66□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Nhlrc1Q8BR37 401 aa9.66□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Q9DAQ5 155 aa9.66□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Col6a5A6H584 2640 aa9.66□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 LrbaQ9ESE1 2856 aa9.65□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Gm4861Q8C5A4 106 aa9.65□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Trav7-6A0A075B640 112 aa9.65□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Trav13-2A0A075B649 110 aa9.65□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Muc5acE9QAQ8 3455 aa9.65□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Trav13-1A0A075B644 110 aa9.64□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Hbb-b2P02089 147 aa9.64□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Ube2d3P61079 147 aa9.64□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Ube2d2P62838 147 aa9.64□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 SelenowP63300 88 aa9.64□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Gm5464Q3UY29 175 aa9.64□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 4930564D02RikQ9D4S4 103 aa9.64□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Rpl32P62911 135 aaKnown RBP9.64□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Igkv3-9A0A140T8P4 119 aa9.64□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Igkv4-68A0A0B4J1I7 117 aa9.63□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Igkv8-34A0A0G2JDU0 121 aa9.63□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Gm884A2A9H6 3643 aa9.63□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Lst1O08843 95 aa9.63□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Mfap4Q9D1H9 257 aa9.62□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Lama5Q61001 3718 aa9.62□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Reg3dQ9QUS9 175 aa9.62□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Atp5eP56382 52 aa9.61□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Foxc1Q61572 553 aa9.61□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Esm1Q9QYY7 184 aa9.61□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Trav4d-3A0A075B625 110 aa9.61□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Gata1P17679 413 aa9.61□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Igkv4-78A0A0A6YYE5 119 aa9.6□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 AngP21570 145 aa9.6□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Defa25Q5G864 92 aa9.6□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Hivep1Q03172 2688 aa9.6□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Gm28539A0A087WSL9 92 aa9.6□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Cdip1Q9DB75 208 aa9.6□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Nbeal2Q6ZQA0 2742 aa9.59□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Defb42Q8BVB5 75 aa9.59□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Cdk2ap2Q9CPY4 127 aa9.59□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Ss18l2Q9D174 77 aa9.59□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Ighv1-63A0A075B5X2 117 aa9.59□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Trav13n-2A0A0G2JF93 110 aa9.59□□□□□ -0.87
Pdgfra-205ENSMUST00000201711 Smim20D3Z7Q2 69 aa9.58□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 MalO09198 153 aa9.58□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 P01823 113 aa9.58□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Igkv4-79A0A075B5L8 119 aa9.58□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Gm10509O88255 85 aa9.58□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Zfp951A0A087WRH0 451 aa9.57□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Gm16381A0A1Y7VKT9 73 aa9.57□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Atp5g3P56384 141 aa9.57□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Psmb11Q8BG41 302 aa9.57□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Tm2d2Q8R0I4 213 aa9.57□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Defb45Q3V490 66 aa9.57□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 2010109I03RikQ9CQ11 111 aa9.57□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Igkv3-2A0A075B5P0 119 aa9.56□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Igkv1-35A0A0G2JDE5 120 aa9.56□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Smrp1Q2MH31 260 aa9.56□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Cd164l2Q9D6W7 172 aa9.56□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Trav4-3A0A0B4J1K1 110 aa9.56□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Igkv6-13A0A0G2JGY3 119 aa9.56□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Srsf12Q8C8K3 266 aa9.56□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Wdr38Q9D994 303 aa9.56□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Pla2g1bQ9Z0Y2 146 aa9.56□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Gm9922Q8C3P1 144 aa9.56□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 82.8 ms