RNA–Protein interactions for RNA: ENSMUST00000192221.5

Pcdh9-202, Transcript of Protocadherin 9, mousemouse

TSL 1 (best) BASIC

Gene Pcdh9, Length 5,161 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-202ENSMUST00000192221 Trav13n-1A0A0G2JEU8 110 aa4.34□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Sprr2jO70561 109 aa4.34□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 FshbQ60687 130 aa4.34□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Ufsp1Q9CZP0 217 aa4.34□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Cabin1G3X8Q1 2187 aaKnown RBP4.34□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Gm11011D3Z3L9 86 aa4.34□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Q08AU9 97 aa4.34□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Fam19a1Q7TPG8 133 aa4.34□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Notch3Q61982 2318 aa4.34□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Myo7bQ99MZ6 2113 aa4.33□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Ighv1-63A0A075B5X2 117 aa4.33□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Gp9O88186 177 aa4.33□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Ly6gP35461 111 aa4.33□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Q8C708 225 aa4.33□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Fgf23Q9EPC2 251 aa4.33□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Sh2d1aO88890 126 aa4.33□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Lynx1P0DP60 116 aa4.33□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 AplnQ9R0R4 77 aa4.33□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Nup214Q80U93 2085 aa4.33□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Trav13-1A0A075B644 110 aa4.33□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Wisp3D3Z5L9 354 aa4.33□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 P01643 108 aa4.33□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Col8a2P25318 699 aa4.33□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 PpdpfQ9CR37 115 aa4.33□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Lrp4Q8VI56 1905 aa4.33□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Ighv1-5A0A0A6YWG2 117 aa4.33□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 PrcdQ00LT2 53 aa4.33□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Reg3gO09049 174 aa4.32□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 SbsponQ3UPR9 264 aa4.32□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Nop10Q9CQS2 64 aa4.32□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Ighv1-74A0A0G2JGK2 117 aa4.32□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Gm17677B3GLJ5 116 aa4.32□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Med12lQ8BQM9 2157 aa4.32□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Cd27P41272 250 aa4.32□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Lmo4P61969 165 aa4.32□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Cd24P24807 76 aa4.32□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 NrgnP60761 78 aa4.32□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Fam110dQ80X91 271 aa4.32□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 SnurfQ9WU12 71 aa4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Parp4E9PYK3 1969 aa4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Fam208bQ5DTT3 2382 aa4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 MyofQ69ZN7 2048 aaKnown RBP4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Trav13d-4A0A0G2JFX3 110 aa4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Gm10638F6QEG2 257 aa4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 P01745 121 aa4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 MlanaQ2TA50 113 aa4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Defb37Q7TMD2 62 aa4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Shank1D3YZU1 2167 aa4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 LrbaQ9ESE1 2856 aa4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Gm10197F6QEY5 67 aa4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Gm9805F6YK59 57 aa4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Reg3bP35230 175 aa4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Rnase13Q5GAM7 153 aa4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Lhfpl1Q80SV1 220 aa4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Sostdc1Q9CQN4 206 aa4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Gm4707V9GXN5 68 aa4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 AcacaQ5SWU9 2345 aa4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Krtap28-13A0A087WQP5 138 aa4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 P18527 97 aa4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Pla2g2dQ9WVF6 144 aa4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Arhgap21Q6DFV3 1944 aa4.31□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Ighv1-56A0A0A6YXG2 117 aa4.3□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Igkv8-19A0A0G2JFN8 121 aa4.3□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Esm1Q9QYY7 184 aa4.3□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 PtprsB0V2N1 1907 aa4.3□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Tnrc18Q80WC3 2878 aa4.3□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Gm15557A6PWY0 234 aa4.3□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Gm1968Q3T9I3 115 aa4.3□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 C130032M10RikQ8C888 123 aa4.3□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Higd2aQ9CQJ1 106 aa4.3□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Gm10570F6VB42 170 aa4.3□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Col6a4A2AX52 2309 aa4.3□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Zfand3Q497H0 227 aa4.3□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Gm6040Q4QY32 63 aa4.3□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Defb45Q3V490 66 aa4.29□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Ros1Q78DX7 2340 aa4.29□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Col12a1Q60847 3120 aa4.29□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Gm5153P01627 120 aa4.29□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 P01753 117 aa4.29□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Gm10577Q3UDV9 132 aa4.29□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Prpf8Q99PV0 2335 aaKnown RBP4.29□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Phf3B2RQG2 2025 aaKnown RBP4.29□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Gm10267M0QWD8 85 aa4.29□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Defb3Q9WTL0 63 aa4.29□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 2310009B15RikA0A0A6YWI4 143 aa4.29□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 LhbO09108 141 aa4.29□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Ighv3-3A0A0A6YWL2 116 aa4.28□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Gm43218A0A0G2JGT0 114 aa4.28□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Odf3Q920N1 254 aa4.28□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 CadB2RQC6 2225 aa4.28□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 P01750 117 aa4.28□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Dmxl2Q8BPN8 3032 aa4.28□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Ighv12-3A0A075B5T1 117 aa4.28□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Znf672Q99LH4 468 aa4.28□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Med12A2AGH6 2190 aa4.28□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Abca4O35600 2310 aa4.28□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 BsnO88737 3942 aa4.28□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Gm44965A0A0N4SVR3 59 aa4.28□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Gm7257D3YX25 99 aa4.28□□□□□ -1.72
Pcdh9-202ENSMUST00000192221 Q9D131 166 aa4.28□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 77.1 ms