RNA–Protein interactions for RNA: ENSMUST00000175898.3

Six3-202, Transcript of Homeobox protein SIX3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Six3, Length 2,419 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Six3-202ENSMUST00000175898 1700011M02RikB1AX35 88 aa19.43■□□□□ 0.7
Six3-202ENSMUST00000175898 Gm10549Q3URY4 149 aa19.43■□□□□ 0.7
Six3-202ENSMUST00000175898 Igkv4-79A0A075B5L8 119 aa19.43■□□□□ 0.7
Six3-202ENSMUST00000175898 Lage3Q9CR70 148 aa19.43■□□□□ 0.7
Six3-202ENSMUST00000175898 LystP97412 3788 aa19.41■□□□□ 0.7
Six3-202ENSMUST00000175898 Prpf8Q99PV0 2335 aaKnown RBP19.41■□□□□ 0.7
Six3-202ENSMUST00000175898 Trav9n-2A0A0G2JDP3 113 aa19.4■□□□□ 0.7
Six3-202ENSMUST00000175898 Reg3gO09049 174 aa19.4■□□□□ 0.7
Six3-202ENSMUST00000175898 Hist1h4aP62806 103 aaKnown RBP19.4■□□□□ 0.7
Six3-202ENSMUST00000175898 Gm815Q3UWS2 115 aa19.4■□□□□ 0.7
Six3-202ENSMUST00000175898 Rpl28P41105 137 aaKnown RBP19.39■□□□□ 0.69
Six3-202ENSMUST00000175898 Gm9513B3GLJ6 99 aa19.38■□□□□ 0.69
Six3-202ENSMUST00000175898 Cox6b1P56391 86 aaKnown RBP19.37■□□□□ 0.69
Six3-202ENSMUST00000175898 Vmo1Q5SXG7 201 aa19.37■□□□□ 0.69
Six3-202ENSMUST00000175898 P01738 130 aa19.37■□□□□ 0.69
Six3-202ENSMUST00000175898 Acyp1P56376 99 aa19.37■□□□□ 0.69
Six3-202ENSMUST00000175898 4930524J08RikQ9CUJ5 163 aa19.37■□□□□ 0.69
Six3-202ENSMUST00000175898 Gm37988J3QM41 62 aa19.36■□□□□ 0.69
Six3-202ENSMUST00000175898 Fam110dQ80X91 271 aa19.36■□□□□ 0.69
Six3-202ENSMUST00000175898 4930470P17RikQ9D542 155 aa19.36■□□□□ 0.69
Six3-202ENSMUST00000175898 Ighv1-58A0A075B5W9 117 aa19.35■□□□□ 0.69
Six3-202ENSMUST00000175898 Gm3618D3Z4P5 127 aa19.35■□□□□ 0.69
Six3-202ENSMUST00000175898 P04219 140 aa19.35■□□□□ 0.69
Six3-202ENSMUST00000175898 A830031A19RikQ8BNT5 113 aa19.35■□□□□ 0.69
Six3-202ENSMUST00000175898 Gm2916Q9D9B9 127 aa19.35■□□□□ 0.69
Six3-202ENSMUST00000175898 Nbeal1E9PYP2 2688 aa19.35■□□□□ 0.69
Six3-202ENSMUST00000175898 Tfpi2O35536 230 aa19.35■□□□□ 0.69
Six3-202ENSMUST00000175898 D130052B06RikQ3UW13 202 aa19.35■□□□□ 0.69
Six3-202ENSMUST00000175898 P01786 117 aa19.34■□□□□ 0.69
Six3-202ENSMUST00000175898 4930519P11RikQ9CUJ8 166 aa19.34■□□□□ 0.69
Six3-202ENSMUST00000175898 Klk11Q9QYN3 276 aa19.34■□□□□ 0.69
Six3-202ENSMUST00000175898 Utp20Q5XG71 2788 aaKnown RBP19.34■□□□□ 0.69
Six3-202ENSMUST00000175898 Chd8Q09XV5 2582 aaKnown RBP19.34■□□□□ 0.69
Six3-202ENSMUST00000175898 Ube2e2Q91W82 201 aa19.33■□□□□ 0.69
Six3-202ENSMUST00000175898 Tm2d2Q8R0I4 213 aa19.32■□□□□ 0.68
Six3-202ENSMUST00000175898 Usp24B1AY13 2617 aaKnown RBP19.32■□□□□ 0.68
Six3-202ENSMUST00000175898 7530416G11RikJ3QJX6 159 aa19.32■□□□□ 0.68
Six3-202ENSMUST00000175898 9430069I07RikQ9CX21 111 aa19.32■□□□□ 0.68
Six3-202ENSMUST00000175898 Ptpn13Q64512 2453 aa19.31■□□□□ 0.68
Six3-202ENSMUST00000175898 Cdc42se2Q8BGH7 84 aa19.31■□□□□ 0.68
Six3-202ENSMUST00000175898 Akap6E9Q9K8 2307 aa19.31■□□□□ 0.68
Six3-202ENSMUST00000175898 Trbv30A0A0B4J1P1 111 aa19.3■□□□□ 0.68
Six3-202ENSMUST00000175898 Trav9d-4A0A0G2JG37 103 aa19.3■□□□□ 0.68
Six3-202ENSMUST00000175898 Klk1b4P00757 256 aa19.29■□□□□ 0.68
Six3-202ENSMUST00000175898 Gm21994F6T2D2 329 aa19.29■□□□□ 0.68
Six3-202ENSMUST00000175898 Defb18Q30KP5 85 aa19.29■□□□□ 0.68
Six3-202ENSMUST00000175898 Q99M08 65 aa19.29■□□□□ 0.68
Six3-202ENSMUST00000175898 OtogO55225 2910 aa19.28■□□□□ 0.68
Six3-202ENSMUST00000175898 P01729 129 aa19.28■□□□□ 0.68
Six3-202ENSMUST00000175898 Plac8l1Q08EJ0 177 aa19.28■□□□□ 0.68
Six3-202ENSMUST00000175898 Dnal4Q9DCM4 105 aa19.28■□□□□ 0.68
Six3-202ENSMUST00000175898 Abca12E9Q876 2595 aa19.27■□□□□ 0.68
Six3-202ENSMUST00000175898 Gm20726G3UX18 150 aa19.27■□□□□ 0.68
Six3-202ENSMUST00000175898 Sh2d1aO88890 126 aa19.26■□□□□ 0.67
Six3-202ENSMUST00000175898 Rpl36aP83882 106 aaKnown RBP19.26■□□□□ 0.67
Six3-202ENSMUST00000175898 Arid1bE9Q4N7 2244 aa19.26■□□□□ 0.67
Six3-202ENSMUST00000175898 Igkv1-35A0A0G2JDE5 120 aa19.25■□□□□ 0.67
Six3-202ENSMUST00000175898 P01745 121 aa19.25■□□□□ 0.67
Six3-202ENSMUST00000175898 Igkv1-117A0A140T8M0 119 aa19.25■□□□□ 0.67
Six3-202ENSMUST00000175898 Rpl18aP62717 176 aaKnown RBP19.25■□□□□ 0.67
Six3-202ENSMUST00000175898 Ndufa12Q7TMF3 145 aaKnown RBP19.25■□□□□ 0.67
Six3-202ENSMUST00000175898 Gm10300Q8C8P7 189 aa19.25■□□□□ 0.67
Six3-202ENSMUST00000175898 Gm10647E9Q8X0 124 aa19.24■□□□□ 0.67
Six3-202ENSMUST00000175898 4930544G11RikQ9CR99 193 aa19.24■□□□□ 0.67
Six3-202ENSMUST00000175898 Dand5Q76LW6 185 aa19.23■□□□□ 0.67
Six3-202ENSMUST00000175898 Hectd1Q69ZR2 2618 aaKnown RBP19.23■□□□□ 0.67
Six3-202ENSMUST00000175898 Gm16381A0A1Y7VKT9 73 aa19.23■□□□□ 0.67
Six3-202ENSMUST00000175898 GfyJ3KML8 504 aa19.23■□□□□ 0.67
Six3-202ENSMUST00000175898 Ntn5Q3UQ22 452 aa19.23■□□□□ 0.67
Six3-202ENSMUST00000175898 Ighv2-9-1A0A075B697 116 aa19.22■□□□□ 0.67
Six3-202ENSMUST00000175898 FlncQ8VHX6 2726 aaKnown RBP19.21■□□□□ 0.67
Six3-202ENSMUST00000175898 Abca2P41234 2434 aa19.21■□□□□ 0.67
Six3-202ENSMUST00000175898 4930518I15RikQ3V2W7 57 aa19.21■□□□□ 0.67
Six3-202ENSMUST00000175898 Rps28P62858 69 aaKnown RBP19.2■□□□□ 0.66
Six3-202ENSMUST00000175898 Spink1P09036 80 aa19.2■□□□□ 0.66
Six3-202ENSMUST00000175898 Defb29Q8BGW9 78 aa19.2■□□□□ 0.66
Six3-202ENSMUST00000175898 Defa4P28311 92 aa19.19■□□□□ 0.66
Six3-202ENSMUST00000175898 Hbb-b2P02089 147 aa19.19■□□□□ 0.66
Six3-202ENSMUST00000175898 CrygaP04345 174 aa19.19■□□□□ 0.66
Six3-202ENSMUST00000175898 Il19Q8CJ70 176 aa19.18■□□□□ 0.66
Six3-202ENSMUST00000175898 Ighv8-11A0A075B5X4 119 aa19.17■□□□□ 0.66
Six3-202ENSMUST00000175898 Ighv1-56A0A0A6YXG2 117 aa19.17■□□□□ 0.66
Six3-202ENSMUST00000175898 Igkv6-13A0A0G2JGY3 119 aa19.17■□□□□ 0.66
Six3-202ENSMUST00000175898 CrygdP04342 174 aa19.17■□□□□ 0.66
Six3-202ENSMUST00000175898 Pfn2Q9JJV2 140 aa19.17■□□□□ 0.66
Six3-202ENSMUST00000175898 Trav13-4-dv7A0A075B6C2 110 aa19.16■□□□□ 0.66
Six3-202ENSMUST00000175898 Defb50Q6TU36 73 aa19.15■□□□□ 0.66
Six3-202ENSMUST00000175898 Ucn2Q99ML8 113 aa19.15■□□□□ 0.66
Six3-202ENSMUST00000175898 Ppp1r32Q148A4 427 aa19.14■□□□□ 0.66
Six3-202ENSMUST00000175898 Serp2Q6TAW2 65 aa19.14■□□□□ 0.66
Six3-202ENSMUST00000175898 1810062G17RikG3X8Y2 129 aa19.13■□□□□ 0.65
Six3-202ENSMUST00000175898 Gm3443F7CCV5 94 aa19.12■□□□□ 0.65
Six3-202ENSMUST00000175898 Gm7849D3YX03 116 aa19.11■□□□□ 0.65
Six3-202ENSMUST00000175898 Cystm1Q8K353 104 aa19.11■□□□□ 0.65
Six3-202ENSMUST00000175898 Zfand2aQ9JII7 171 aa19.11■□□□□ 0.65
Six3-202ENSMUST00000175898 Chd9Q8BYH8 2885 aa19.1■□□□□ 0.65
Six3-202ENSMUST00000175898 Muc2Q80Z19 2680 aa19.1■□□□□ 0.65
Six3-202ENSMUST00000175898 Ankrd11E9Q4F7 2643 aa19.1■□□□□ 0.65
Six3-202ENSMUST00000175898 Tmem258P61166 79 aa19.1■□□□□ 0.65
Six3-202ENSMUST00000175898 Notch3Q61982 2318 aa19.09■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 43.4 ms