RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 Ighv1-4A0A075B5T4 117 aa8.34□□□□□ -1.07
Ssh1-201ENSMUST00000077689 Igkv4-57A0A0A6YYE7 117 aa8.34□□□□□ -1.07
Ssh1-201ENSMUST00000077689 Gphb5Q812B2 130 aa8.34□□□□□ -1.07
Ssh1-201ENSMUST00000077689 Ptpn13Q64512 2453 aa8.34□□□□□ -1.07
Ssh1-201ENSMUST00000077689 Ighv3-4A0A0A6YXF1 117 aa8.34□□□□□ -1.07
Ssh1-201ENSMUST00000077689 Trav13n-1A0A0G2JEU8 110 aa8.34□□□□□ -1.07
Ssh1-201ENSMUST00000077689 Lst1O08843 95 aa8.34□□□□□ -1.07
Ssh1-201ENSMUST00000077689 A130051J06RikQ8CAU1 227 aa8.34□□□□□ -1.07
Ssh1-201ENSMUST00000077689 Ubr5Q80TP3 2792 aa8.34□□□□□ -1.07
Ssh1-201ENSMUST00000077689 Igkv20-101-2A0A0G2JDU3 113 aa8.34□□□□□ -1.07
Ssh1-201ENSMUST00000077689 Ly6lH3BJG9 140 aa8.34□□□□□ -1.07
Ssh1-201ENSMUST00000077689 Ppp1r32Q148A4 427 aa8.34□□□□□ -1.07
Ssh1-201ENSMUST00000077689 Ang2Q64438 145 aa8.34□□□□□ -1.07
Ssh1-201ENSMUST00000077689 Snrpd3P62320 126 aaKnown RBP8.33□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Psmb11Q8BG41 302 aa8.33□□□□□ -1.08
Ssh1-201ENSMUST00000077689 MplkipQ9D011 178 aa8.33□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Synj2bpQ9D6K5 145 aa8.33□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Wfdc15bQ9JHY4 80 aa8.33□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Cd164Q9R0L9 197 aa8.33□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Sostdc1Q9CQN4 206 aa8.33□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Fgf23Q9EPC2 251 aa8.33□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Cmya5Q70KF4 3739 aa8.33□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Gm17732E9Q5I2 61 aa8.32□□□□□ -1.08
Ssh1-201ENSMUST00000077689 P06328 117 aa8.32□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Lmo4P61969 165 aa8.32□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Minos1Q7TNS2 76 aa8.32□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Pla2g2dQ9WVF6 144 aa8.32□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Ighv1-12A0A0A6YXJ9 117 aa8.32□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Ighv1-53A0A075B5W3 117 aa8.32□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Gm5878E9PUB3 99 aa8.32□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Trbv16A0A0B4J1H3 115 aa8.31□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Ighv1-72P01751 139 aa8.31□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Lamtor3O88653 124 aa8.31□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Vpreb2P13373 142 aa8.31□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Spink8Q09TK9 105 aa8.3□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Gm9747Q810H1 104 aa8.3□□□□□ -1.08
Ssh1-201ENSMUST00000077689 CrygfQ9CXV3 174 aa8.3□□□□□ -1.08
Ssh1-201ENSMUST00000077689 1700010B08RikQ9DAI7 102 aa8.3□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Igkv4-59A0A0B4J1I8 117 aa8.3□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Gm15557A6PWY0 234 aa8.3□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Mob4Q6PEB6 225 aa8.3□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Abca12E9Q876 2595 aa8.3□□□□□ -1.08
Ssh1-201ENSMUST00000077689 B230217C12RikE9Q3Z1 139 aa8.3□□□□□ -1.08
Ssh1-201ENSMUST00000077689 FshbQ60687 130 aa8.3□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Gm9195A0A140LHT4 2805 aa8.3□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Svep1A2AVA0 3567 aa8.3□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Q4KKZ1 196 aa8.29□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Nbl1Q61477 178 aa8.29□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Spint4Q9D263 159 aa8.29□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Igkv4-91A0A075B5L2 119 aa8.29□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Ighv3-1A0A075B5S6 116 aa8.29□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Acyp1P56376 99 aa8.29□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Cela2aP05208 271 aa8.28□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Rnf152Q8BG47 203 aa8.28□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Rif1Q6PR54 2419 aaKnown RBP8.28□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Nbeal1E9PYP2 2688 aa8.28□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Itpr3P70227 2670 aa8.28□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Spag11Q8K4N2 71 aa8.28□□□□□ -1.08
Ssh1-201ENSMUST00000077689 3110070M22RikQ9DAQ7 118 aa8.28□□□□□ -1.08
Ssh1-201ENSMUST00000077689 Edn3P48299 214 aa8.27□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Ighv1-75A0A075B5Y2 117 aa8.27□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Ighv2-3A0A075B696 115 aa8.27□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Abca2P41234 2434 aa8.27□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Ighv1-50A0A075B5W1 117 aa8.26□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Ighv1-85A0A075B5Y6 117 aa8.26□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Ighv1-74A0A0G2JGK2 117 aa8.26□□□□□ -1.09
Ssh1-201ENSMUST00000077689 P01750 117 aa8.26□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Odf1Q61999 247 aa8.26□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Ankhd1E9PUR0 2548 aaKnown RBP8.26□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Ighv1-64A0A075B5X3 117 aa8.26□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Ighv1-66A0A075B5X5 117 aa8.26□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Ighv2-6-8A0A0A6YWY9 116 aa8.26□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Igkv4-70A0A0B4J1I5 116 aa8.26□□□□□ -1.09
Ssh1-201ENSMUST00000077689 P01823 113 aa8.26□□□□□ -1.09
Ssh1-201ENSMUST00000077689 BlcapP62951 87 aa8.26□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Vmo1Q5SXG7 201 aa8.26□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Fam19a3Q7TPG6 132 aa8.26□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Dmbt1Q60997 2085 aa8.25□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Trbv13-2A0A140T8N6 113 aa8.25□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Gm16381A0A1Y7VKT9 73 aa8.25□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Krtap27-1E9PX37 202 aa8.25□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Ighv3-3A0A0A6YWL2 116 aa8.24□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Gm9513B3GLJ6 99 aa8.24□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Cox7a1P56392 80 aa8.24□□□□□ -1.09
Ssh1-201ENSMUST00000077689 A930002H24RikQ8C8Y3 163 aa8.24□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Bahcc1Q3UHR0 2643 aa8.24□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Ighv1-82A0A0G2JEU7 117 aa8.24□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Rpl36aP83882 106 aaKnown RBP8.24□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Akap6E9Q9K8 2307 aa8.24□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Igkv4-53A0A0G2JFC6 119 aa8.24□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Trav9d-4A0A0G2JG37 103 aa8.24□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Ndufa12Q7TMF3 145 aaKnown RBP8.24□□□□□ -1.09
Ssh1-201ENSMUST00000077689 1700011M02RikB1AX35 88 aa8.23□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Gm9925F6T2U3 160 aa8.23□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Gm20604F8WIA3 75 aa8.23□□□□□ -1.09
Ssh1-201ENSMUST00000077689 E130208F15RikQ3UPV3 143 aa8.23□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Ifitm1Q9D103 106 aa8.23□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Ifitm6A0A1B0GS75 124 aa8.22□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Gm21994F6T2D2 329 aa8.22□□□□□ -1.09
Ssh1-201ENSMUST00000077689 Pglyrp1O88593 182 aa8.22□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 55.6 ms