RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Ighv2-3A0A075B696 115 aa5.2□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Reg3gO09049 174 aa5.2□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Bri3P28662 125 aa5.2□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Gm10767Q3TQP0 103 aa5.2□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Gatd1Q8BFQ8 220 aa5.2□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Gm9922Q8C3P1 144 aa5.2□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Gm9936Q8C864 160 aa5.2□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Notch2O35516 2470 aa5.2□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Stab1Q8R4Y4 2571 aa5.2□□□□□ -1.58
Clrn1-202ENSMUST00000055636 9430015G10RikA2ASP7 199 aa5.2□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Gm6793B2RXM2 351 aa5.2□□□□□ -1.58
Clrn1-202ENSMUST00000055636 4930415O20RikQ8CDT5 131 aa5.2□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Fgf23Q9EPC2 251 aa5.2□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Tenm1Q9WTS4 2731 aa5.2□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Trav13d-1A0A075B606 110 aa5.2□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Gm8439G3UWA7 96 aa5.2□□□□□ -1.58
Clrn1-202ENSMUST00000055636 PkigO70139 76 aa5.2□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Fhl2O70433 279 aa5.2□□□□□ -1.58
Clrn1-202ENSMUST00000055636 P06329 120 aa5.2□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Krtap26-1Q9D7N2 215 aa5.2□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Znf580Q9DB38 172 aa5.2□□□□□ -1.58
Clrn1-202ENSMUST00000055636 TtrP07309 147 aa5.19□□□□□ -1.58
Clrn1-202ENSMUST00000055636 AngP21570 145 aa5.19□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Snrpd3P62320 126 aaKnown RBP5.19□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Foxc1Q61572 553 aa5.19□□□□□ -1.58
Clrn1-202ENSMUST00000055636 3110070M22RikQ9DAQ7 118 aa5.19□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Eif4ebp1Q60876 117 aa5.18□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Ighv1-63A0A075B5X2 117 aa5.18□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Glrp1E9Q9S8 174 aa5.18□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Gm11020F6ZGD5 61 aa5.18□□□□□ -1.58
Clrn1-202ENSMUST00000055636 P01753 117 aa5.18□□□□□ -1.58
Clrn1-202ENSMUST00000055636 SbsponQ3UPR9 264 aa5.18□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Spry2Q9QXV8 315 aa5.18□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Ighv2-6-8A0A0A6YWY9 116 aa5.17□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Gm9767G3X930 207 aa5.17□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Erdr1J3QMM0 206 aa5.17□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Fam110dQ80X91 271 aa5.17□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Gm10300Q8C8P7 189 aa5.17□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Ndufa3Q9CQ91 84 aa5.17□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Esm1Q9QYY7 184 aa5.17□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Smim10l1A0A087WNQ7 89 aa5.17□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Gm10490F6VBM2 120 aa5.17□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Klk1b4P00757 256 aa5.17□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Gm9747Q810H1 104 aa5.17□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Cd99Q8VCN6 175 aa5.17□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Gm10337F7DEP7 55 aa5.17□□□□□ -1.58
Clrn1-202ENSMUST00000055636 CrygeQ03740 174 aa5.17□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Rnf183Q8QZS5 190 aa5.17□□□□□ -1.58
Clrn1-202ENSMUST00000055636 BaalcQ8VHV1 145 aa5.17□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Trav4d-3A0A075B625 110 aa5.16□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Krtap27-1E9PX37 202 aa5.16□□□□□ -1.58
Clrn1-202ENSMUST00000055636 B230217C12RikE9Q3Z1 139 aa5.16□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Apoc4Q61268 124 aa5.16□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Tmem101Q91VP7 257 aa5.16□□□□□ -1.58
Clrn1-202ENSMUST00000055636 RetnQ99P87 114 aa5.16□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Ifitm1Q9D103 106 aa5.16□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Gm3443F7CCV5 94 aa5.16□□□□□ -1.58
Clrn1-202ENSMUST00000055636 SpinklQ8CEK3 90 aa5.16□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Atp5g1Q9CR84 136 aa5.16□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Synj2bpQ9D6K5 145 aa5.16□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Fam216aQ9DB54 251 aa5.16□□□□□ -1.58
Clrn1-202ENSMUST00000055636 4930470P17RikQ9D542 155 aa5.15□□□□□ -1.58
Clrn1-202ENSMUST00000055636 4930442H23RikQ9D5G7 103 aa5.15□□□□□ -1.58
Clrn1-202ENSMUST00000055636 Col6a5A6H584 2640 aa5.15□□□□□ -1.58
Clrn1-202ENSMUST00000055636 PolqQ8CGS6 2544 aa5.15□□□□□ -1.58
Clrn1-202ENSMUST00000055636 TeppQ6IMH0 216 aa5.15□□□□□ -1.59
Clrn1-202ENSMUST00000055636 H2al1bA0A087WP11 105 aa5.15□□□□□ -1.59
Clrn1-202ENSMUST00000055636 H2al1kJ3QP08 105 aa5.15□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Defa1P11477 93 aa5.15□□□□□ -1.59
Clrn1-202ENSMUST00000055636 4930432M17RikQ3V0W9 174 aa5.15□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Znf740Q6NZQ6 180 aa5.15□□□□□ -1.59
Clrn1-202ENSMUST00000055636 H1fxQ80ZM5 188 aa5.15□□□□□ -1.59
Clrn1-202ENSMUST00000055636 H2al1eQ810S6 105 aa5.15□□□□□ -1.59
Clrn1-202ENSMUST00000055636 H2al1mQ9DAD9 105 aa5.15□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Ly6hQ9WUC3 139 aa5.15□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Cox6cQ9CPQ1 76 aa5.14□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Cd164l2Q9D6W7 172 aa5.14□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Timm17bQ9Z0V7 172 aa5.14□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Igkv4-91A0A075B5L2 119 aa5.14□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Igkv4-78A0A0A6YYE5 119 aa5.14□□□□□ -1.59
Clrn1-202ENSMUST00000055636 PrlhG3UWC3 86 aa5.14□□□□□ -1.59
Clrn1-202ENSMUST00000055636 CdsnQ7TPC1 561 aa5.14□□□□□ -1.59
Clrn1-202ENSMUST00000055636 A830031A19RikQ8BNT5 113 aa5.14□□□□□ -1.59
Clrn1-202ENSMUST00000055636 4930564D02RikQ9D4S4 103 aa5.14□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Trdv5A0A075B661 115 aa5.13□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Trbv30A0A0B4J1P1 111 aa5.13□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Gm9513B3GLJ6 99 aa5.13□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Ighv1-72P01751 139 aa5.13□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Pglyrp4Q0VB07 374 aa5.13□□□□□ -1.59
Clrn1-202ENSMUST00000055636 ScxQ64124 207 aa5.13□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Prelid3aQ8VE85 172 aa5.13□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Sostdc1Q9CQN4 206 aa5.13□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Gm10509O88255 85 aa5.13□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Ighv5-9-1A0A0A6YVS4 126 aa5.12□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Gm7075D3Z497 112 aa5.12□□□□□ -1.59
Clrn1-202ENSMUST00000055636 P01823 113 aa5.12□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Trav14d-3-dv8A0A075B619 120 aa5.12□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Ighv1-11A0A0A6YWI9 117 aa5.12□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Trav4-3A0A0B4J1K1 110 aa5.12□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Trav13n-1A0A0G2JEU8 110 aa5.12□□□□□ -1.59
Retrieved 100 of 22,080 RNA–protein pairs in 58.7 ms