RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 4930546C10RikE9Q4Y3 121 aa13.66□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 9430069I07RikQ9CX21 111 aa13.66□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 Ly6hQ9WUC3 139 aa13.66□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 Sorl1O88307 2215 aaKnown RBP13.66□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 Ighv1-62-1A0A075B5U3 116 aa13.65□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 Helz2E9QAM5 2947 aaKnown RBP13.65□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 Gm867A0A1W2P7T4 151 aa13.65□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 Gm3443F7CCV5 94 aa13.65□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 Erdr1J3QMM0 206 aa13.65□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 Lage3Q9CR70 148 aa13.65□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 Znf414Q9DCK4 299 aa13.65□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 Qrich2A0A140LIY9 2337 aa13.64□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 Igkv4-79A0A075B5L8 119 aa13.64□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 Smim10l1A0A087WNQ7 89 aa13.64□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 SbsponQ3UPR9 264 aa13.64□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 Gm10542F6XDR3 90 aa13.63□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 Gm8439G3UWA7 96 aa13.63□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 Lst1O08843 95 aa13.63□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 Ank2Q8C8R3 3898 aa13.63□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 Gm10735Q3US96 136 aa13.62□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 FlnbQ80X90 2602 aaKnown RBP13.62□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 Gm7849D3YX03 116 aa13.61□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 Cdc42se2Q8BGH7 84 aa13.61□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 Shisa2Q8QZV2 295 aa13.61□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 Sostdc1Q9CQN4 206 aa13.61□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 PemtQ61907 199 aa13.61□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 Gm4861Q8C5A4 106 aa13.61□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 Trav13n-1A0A0G2JEU8 110 aa13.6□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 Gm10549Q3URY4 149 aa13.6□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 Gm26661M0QWV4 156 aa13.59□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 MalO09198 153 aa13.59□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 SelenowP63300 88 aa13.59□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 TeppQ6IMH0 216 aa13.59□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 FlnaQ8BTM8 2647 aaKnown RBP13.58□□□□□ -0.23
Ccdc50-201ENSMUST00000039443 Dmbt1Q60997 2085 aa13.58□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 Tfpi2O35536 230 aa13.58□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 Plac8l1Q08EJ0 177 aa13.58□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 Spata25Q9DA57 226 aa13.58□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 Ndufa3Q9CQ91 84 aa13.57□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 1700011M02RikB1AX35 88 aa13.56□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 Acyp1P56376 99 aa13.56□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 Znf740Q6NZQ6 180 aa13.56□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 Defb42Q8BVB5 75 aa13.56□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 BB014433Q8C5R5 389 aa13.56□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 Akap13E9Q394 2776 aa13.55□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 P01729 129 aa13.55□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 CrygaP04345 174 aa13.55□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 Chchd7Q8K2Q5 85 aa13.55□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 Cd164l2Q9D6W7 172 aa13.55□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 Gm7075D3Z497 112 aa13.54□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 Scgb1b2O35176 93 aa13.54□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 Rnase1P00683 149 aa13.54□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 Rpl28P41105 137 aaKnown RBP13.54□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 Gm9922Q8C3P1 144 aa13.54□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 Trav14d-3-dv8A0A075B619 120 aa13.52□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 Gm9513B3GLJ6 99 aa13.52□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 Xcl1P47993 114 aa13.52□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 Atp5g1Q9CR84 136 aa13.52□□□□□ -0.24
Ccdc50-201ENSMUST00000039443 PkigO70139 76 aa13.52□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 Spry2Q9QXV8 315 aa13.52□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 P01745 121 aa13.51□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 Spink10Q8CAC8 162 aa13.51□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 Trav11A0A0B4J1J9 114 aa13.51□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 Smim20D3Z7Q2 69 aa13.51□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 Spink1P09036 80 aa13.5□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 Pglyrp4Q0VB07 374 aa13.5□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 5730596B20RikQ8BQ08 205 aa13.5□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 RetnQ99P87 114 aa13.5□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 Avpi1Q9D7H4 142 aa13.5□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 Trav9d-4A0A0G2JG37 103 aa13.49□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 Ss18l2Q9D174 77 aa13.49□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 Trav3-4A0A075B654 114 aa13.49□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 SmcpP15265 143 aa13.49□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 Tm2d2Q8R0I4 213 aa13.49□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 GfyJ3KML8 504 aa13.48□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 Ppp1r32Q148A4 427 aa13.48□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 Gm5089A1L3C8 106 aa13.48□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 Nop10Q9CQS2 64 aa13.48□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 Vmo1Q5SXG7 201 aa13.47□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 Crlf1Q9JM58 425 aa13.47□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 Gm16381A0A1Y7VKT9 73 aa13.47□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 Lypd5Q9D7Z7 256 aa13.47□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 Ighv2-9-1A0A075B697 116 aa13.46□□□□□ -0.25
Ccdc50-201ENSMUST00000039443 4930544G11RikQ9CR99 193 aa13.45□□□□□ -0.26
Ccdc50-201ENSMUST00000039443 4930524J08RikQ9CUJ5 163 aa13.45□□□□□ -0.26
Ccdc50-201ENSMUST00000039443 Zfand2aQ9JII7 171 aa13.45□□□□□ -0.26
Ccdc50-201ENSMUST00000039443 PrlhG3UWC3 86 aa13.45□□□□□ -0.26
Ccdc50-201ENSMUST00000039443 Lyrm9Q3UN90 78 aa13.45□□□□□ -0.26
Ccdc50-201ENSMUST00000039443 Ndufa12Q7TMF3 145 aaKnown RBP13.45□□□□□ -0.26
Ccdc50-201ENSMUST00000039443 Muc4Q8JZM8 3443 aa13.44□□□□□ -0.26
Ccdc50-201ENSMUST00000039443 9530053A07RikE9PVG8 2581 aa13.44□□□□□ -0.26
Ccdc50-201ENSMUST00000039443 Cox6b1P56391 86 aaKnown RBP13.44□□□□□ -0.26
Ccdc50-201ENSMUST00000039443 MobpQ9D2P8 170 aa13.43□□□□□ -0.26
Ccdc50-201ENSMUST00000039443 Trav13-4-dv7A0A075B6C2 110 aa13.42□□□□□ -0.26
Ccdc50-201ENSMUST00000039443 Ighv1-49A0A0A6YWX2 117 aa13.42□□□□□ -0.26
Ccdc50-201ENSMUST00000039443 Defa1P11477 93 aa13.42□□□□□ -0.26
Ccdc50-201ENSMUST00000039443 Apoc4Q61268 124 aa13.42□□□□□ -0.26
Ccdc50-201ENSMUST00000039443 Esm1Q9QYY7 184 aa13.42□□□□□ -0.26
Ccdc50-201ENSMUST00000039443 Trav9d-3A0A075B695 113 aa13.42□□□□□ -0.26
Ccdc50-201ENSMUST00000039443 Gm10772F7AIG4 85 aa13.42□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 49.9 ms