RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Odf1Q61999 247 aa8.05□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Pou2af1Q64693 256 aa8.05□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 PmvkQ9D1G2 192 aa8.05□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Zc2hc1bQ9D534 172 aa8.05□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Gm2564F6Z9S8 108 aa8.05□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Socs3O35718 225 aa8.05□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 P01643 108 aa8.05□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Ube2d1P61080 147 aaKnown RBP8.05□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 C920008G01RikA0A0B4J1N1 112 aa8.05□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Ovol2Q8CIV7 274 aa8.05□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Ighv1-82A0A0G2JEU7 117 aa8.04□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Ifitm10Q8BR26 201 aa8.04□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 HampQ9EQ21 83 aa8.04□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Igkv4-70A0A0B4J1I5 116 aa8.04□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Ins2P01326 110 aa8.04□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Wdr38Q9D994 303 aa8.04□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Gm10521E9PZK0 135 aa8.03□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Defb47Q30KN1 79 aa8.03□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Spag11Q8K4N2 71 aa8.03□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Naa38Q9D2U5 125 aa8.03□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Gm15557A6PWY0 234 aa8.03□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Gm37988J3QM41 62 aa8.03□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Il1f10Q8R459 152 aa8.03□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Defb2P82020 71 aa8.03□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Mob4Q6PEB6 225 aa8.03□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Crip2Q9DCT8 208 aaKnown RBP8.03□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Rpl36-ps4A0A140T8U4 117 aa8.02□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 P06328 117 aa8.02□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 LrbaQ9ESE1 2856 aa8.02□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Ighv8-5A0A0A6YY60 119 aa8.02□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Ube2d3P61079 147 aa8.02□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Ube2d2P62838 147 aa8.02□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Crlf1Q9JM58 425 aa8.02□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Trav13-2A0A075B649 110 aa8.01□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Notch3Q61982 2318 aa8.01□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Gm933J3QPC1 141 aa8.01□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Cela2aP05208 271 aa8.01□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Gm21748Q3UE70 102 aa8.01□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Tmem258P61166 79 aa8□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 C1qcQ02105 246 aa8□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 4930432M17RikQ3V0W9 174 aa8□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 LhbO09108 141 aa8□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 SNORCQ9CXL7 121 aa8□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Prr9Q8BV84 116 aa8□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Tac4Q99N14 128 aa8□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 9430069I07RikQ9CX21 111 aa8□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Lect2O88803 151 aa7.99□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 P01750 117 aa7.99□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Cfap126Q6P8X9 189 aa7.99□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Q9DAB9 146 aa7.99□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Trav14d-3-dv8A0A075B619 120 aa7.99□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Tcte2E9PY37 120 aa7.99□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Gm10135F6TEE5 83 aa7.99□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 P01820 115 aa7.99□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Defa21Q8C1P2 93 aa7.99□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Ankrd17Q99NH0 2603 aaKnown RBP7.99□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 C2cd3Q52KB6 2323 aa7.99□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Gm19935A0A1B0GSF9 52 aa7.98□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Cep192E9Q4Y4 2514 aaKnown RBP7.98□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Ighv1-52A0A0A6YXC3 117 aa7.98□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Gm7849D3YX03 116 aa7.98□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Trav7d-3Q5R1I1 112 aa7.98□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Lyzl4Q9D925 145 aa7.98□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Iah1Q9DB29 249 aa7.98□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Higd1aQ9JLR9 95 aa7.98□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 OdaphJ3QNT8 126 aa7.98□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 FcorP0DJI6 106 aa7.98□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 BlcapP62951 87 aa7.98□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Smr3aQ61900 147 aa7.98□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Polr2kQ63871 58 aa7.98□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Gcn1E9PVA8 2671 aaKnown RBP7.97□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Trav4n-4A0A075B615 110 aa7.97□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 NpwA0A1L1STR8 176 aa7.97□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Mrpl35Q9CQL6 188 aa7.97□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 3110018I06RikQ9CXS0 120 aa7.97□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Morn5Q9DAI9 170 aa7.97□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Chd9Q8BYH8 2885 aa7.97□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Mpv17l2Q8VIK2 200 aa7.97□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Rif1Q6PR54 2419 aaKnown RBP7.96□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 MsmbO08540 113 aa7.96□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 P01753 117 aa7.96□□□□□ -1.13
Prpf40b-202ENSMUST00000118287 Ighv12-3A0A075B5T1 117 aa7.96□□□□□ -1.14
Prpf40b-202ENSMUST00000118287 Trav6-4A0A075B6B4 115 aa7.96□□□□□ -1.14
Prpf40b-202ENSMUST00000118287 Gm17732E9Q5I2 61 aa7.96□□□□□ -1.14
Prpf40b-202ENSMUST00000118287 Gphb5Q812B2 130 aa7.96□□□□□ -1.14
Prpf40b-202ENSMUST00000118287 Spink12Q9D256 87 aa7.96□□□□□ -1.14
Prpf40b-202ENSMUST00000118287 Ighv1-75A0A075B5Y2 117 aa7.96□□□□□ -1.14
Prpf40b-202ENSMUST00000118287 Ighv3-3A0A0A6YWL2 116 aa7.96□□□□□ -1.14
Prpf40b-202ENSMUST00000118287 CrygfQ9CXV3 174 aa7.95□□□□□ -1.14
Prpf40b-202ENSMUST00000118287 FlnaQ8BTM8 2647 aaKnown RBP7.95□□□□□ -1.14
Prpf40b-202ENSMUST00000118287 Ighv1-50A0A075B5W1 117 aa7.95□□□□□ -1.14
Prpf40b-202ENSMUST00000118287 Gm29666A0A087WQ99 126 aa7.95□□□□□ -1.14
Prpf40b-202ENSMUST00000118287 Igfn1Q3KNY0 2849 aa7.94□□□□□ -1.14
Prpf40b-202ENSMUST00000118287 Trav13-4-dv7A0A075B6C2 110 aa7.94□□□□□ -1.14
Prpf40b-202ENSMUST00000118287 Trav13d-4A0A0G2JFX3 110 aa7.94□□□□□ -1.14
Prpf40b-202ENSMUST00000118287 Gm17455G3UW87 128 aa7.94□□□□□ -1.14
Prpf40b-202ENSMUST00000118287 Gm10553J3QPF1 123 aa7.94□□□□□ -1.14
Prpf40b-202ENSMUST00000118287 1500011B03RikQ3TTH7 73 aa7.94□□□□□ -1.14
Prpf40b-202ENSMUST00000118287 Fam19a4Q7TPG5 135 aa7.94□□□□□ -1.14
Prpf40b-202ENSMUST00000118287 Gm20730A0A075B5J6 119 aa7.94□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 118.1 ms