RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Csn3P06796 181 aa16.47■□□□□ 0.23
Upf3a-201ENSMUST00000043767 Hint1P70349 126 aaKnown RBP16.47■□□□□ 0.23
Upf3a-201ENSMUST00000043767 Ss18Q62280 418 aa16.47■□□□□ 0.23
Upf3a-201ENSMUST00000043767 Plac1Q9JI83 173 aa16.47■□□□□ 0.23
Upf3a-201ENSMUST00000043767 Tcf24V9GWT9 166 aa16.47■□□□□ 0.23
Upf3a-201ENSMUST00000043767 Ighv1-66A0A075B5X5 117 aa16.47■□□□□ 0.23
Upf3a-201ENSMUST00000043767 P01738 130 aa16.47■□□□□ 0.23
Upf3a-201ENSMUST00000043767 Trav9n-2A0A0G2JDP3 113 aa16.46■□□□□ 0.23
Upf3a-201ENSMUST00000043767 Iah1Q9DB29 249 aa16.46■□□□□ 0.23
Upf3a-201ENSMUST00000043767 Gm12057A0A087WR21 115 aa16.46■□□□□ 0.22
Upf3a-201ENSMUST00000043767 Gm20499D3Z4G5 72 aa16.46■□□□□ 0.22
Upf3a-201ENSMUST00000043767 B230217C12RikE9Q3Z1 139 aa16.46■□□□□ 0.22
Upf3a-201ENSMUST00000043767 PtprqP0C5E4 2300 aa16.45■□□□□ 0.22
Upf3a-201ENSMUST00000043767 Gm10271F6WY25 52 aa16.45■□□□□ 0.22
Upf3a-201ENSMUST00000043767 Sigmar1O55242 223 aa16.45■□□□□ 0.22
Upf3a-201ENSMUST00000043767 Ighv8-12A0A0G2JDE1 119 aa16.44■□□□□ 0.22
Upf3a-201ENSMUST00000043767 Gm44965A0A0N4SVR3 59 aa16.44■□□□□ 0.22
Upf3a-201ENSMUST00000043767 A730046J19RikA0A1B0GSN8 89 aa16.44■□□□□ 0.22
Upf3a-201ENSMUST00000043767 Tmem170bP86050 132 aa16.44■□□□□ 0.22
Upf3a-201ENSMUST00000043767 Trav4n-4A0A075B615 110 aa16.44■□□□□ 0.22
Upf3a-201ENSMUST00000043767 Spink13Q3UTS8 97 aa16.44■□□□□ 0.22
Upf3a-201ENSMUST00000043767 Trbv16A0A0B4J1H3 115 aa16.42■□□□□ 0.22
Upf3a-201ENSMUST00000043767 Ube2d1P61080 147 aaKnown RBP16.42■□□□□ 0.22
Upf3a-201ENSMUST00000043767 1500011B03RikQ3TTH7 73 aa16.42■□□□□ 0.22
Upf3a-201ENSMUST00000043767 BC025920Q3US60 128 aa16.42■□□□□ 0.22
Upf3a-201ENSMUST00000043767 Polr2kQ63871 58 aa16.42■□□□□ 0.22
Upf3a-201ENSMUST00000043767 Dpm2Q9Z324 84 aa16.41■□□□□ 0.22
Upf3a-201ENSMUST00000043767 Q99M08 65 aa16.41■□□□□ 0.22
Upf3a-201ENSMUST00000043767 Trav8-1A0A075B641 109 aa16.4■□□□□ 0.22
Upf3a-201ENSMUST00000043767 E130114P18RikF6S0S7 154 aa16.4■□□□□ 0.22
Upf3a-201ENSMUST00000043767 Ighv8-5A0A0A6YY60 119 aa16.39■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Trav3-1Q5R1I8 114 aa16.39■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Pgpep1Q9ESW8 209 aa16.39■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Dnah6E9Q0B6 4144 aa16.39■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Trav7-2Q5R1I3 112 aa16.39■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Pglyrp1O88593 182 aa16.38■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Atp6v0e2Q91XE7 81 aa16.38■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Krtap27-1E9PX37 202 aa16.37■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Gemin7Q9CWY4 129 aa16.37■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Gm17732E9Q5I2 61 aa16.36■□□□□ 0.21
Upf3a-201ENSMUST00000043767 VwfQ8CIZ8 2813 aa16.36■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Tcrg-C1A0A075B5Z0 172 aa16.36■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Trav7d-3Q5R1I1 112 aa16.36■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Nop10Q9CQS2 64 aa16.36■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Dnah10D3YYQ8 4591 aa16.36■□□□□ 0.21
Upf3a-201ENSMUST00000043767 GfyJ3KML8 504 aa16.35■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Morn3Q8C5T4 241 aa16.35■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Lyzl4Q9D925 145 aa16.35■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Gm6812B1AXU1 112 aa16.34■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Znf740Q6NZQ6 180 aa16.34■□□□□ 0.21
Upf3a-201ENSMUST00000043767 PmvkQ9D1G2 192 aa16.34■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Pla2g1bQ9Z0Y2 146 aa16.34■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Ube2d3P61079 147 aa16.34■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Ube2d2P62838 147 aa16.34■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Fxyd5P97808 178 aa16.33■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Cysltr1Q99JA4 352 aa16.33■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Tspan13Q9D8C2 204 aa16.33■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Tmem263Q9DAM7 115 aa16.33■□□□□ 0.21
Upf3a-201ENSMUST00000043767 Trbv13-1A0A0B4J1P8 112 aa16.33■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Gm45753A0A1C7CYU8 86 aa16.33■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Defa3P28310 93 aa16.33■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Defa10P50708 93 aa16.33■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Defa15P50713 93 aa16.33■□□□□ 0.2
Upf3a-201ENSMUST00000043767 SrarpQ3ULG3 163 aa16.33■□□□□ 0.2
Upf3a-201ENSMUST00000043767 BC048562Q80ZQ7 204 aa16.33■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Tac4Q99N14 128 aa16.33■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Ndufs7Q9DC70 224 aa16.33■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Ighv1-5A0A0A6YWG2 117 aa16.32■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Gm42674D3YUT9 64 aa16.32■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Gm10509O88255 85 aa16.32■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Foxi2Q3I5G5 311 aa16.32■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Dand5Q76LW6 185 aa16.32■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Srsf9Q9D0B0 222 aaKnown RBP16.32■□□□□ 0.2
Upf3a-201ENSMUST00000043767 PolP10400 120 aa16.31■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Pcp4P63054 62 aa16.31■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Timm17aQ9Z0V8 171 aa16.31■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Mllt11P97783 90 aa16.31■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Gm1553Q66VB7 94 aa16.31■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Dmrt3Q80WT2 476 aa16.31■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Nat8b-psE0CYC6 232 aa16.3■□□□□ 0.2
Upf3a-201ENSMUST00000043767 4930596D02RikQ3V0H9 216 aa16.3■□□□□ 0.2
Upf3a-201ENSMUST00000043767 BatfO35284 125 aa16.29■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Rpl39P62892 51 aa16.29■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Q8R092 253 aa16.29■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Trdv5A0A075B661 115 aa16.28■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Igkv2-137A0A0B4J1H6 120 aa16.28■□□□□ 0.2
Upf3a-201ENSMUST00000043767 NrepQ07475 68 aa16.28■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Q5BN45 167 aa16.28■□□□□ 0.2
Upf3a-201ENSMUST00000043767 TnxbO35452 4006 aa16.28■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Kmt2aP55200 3966 aa16.27■□□□□ 0.2
Upf3a-201ENSMUST00000043767 Ighv1-85A0A075B5Y6 117 aa16.26■□□□□ 0.19
Upf3a-201ENSMUST00000043767 Triap1Q9D8Z2 76 aa16.26■□□□□ 0.19
Upf3a-201ENSMUST00000043767 Klk11Q9QYN3 276 aa16.26■□□□□ 0.19
Upf3a-201ENSMUST00000043767 A530064D06RikQ8BNV8 229 aa16.25■□□□□ 0.19
Upf3a-201ENSMUST00000043767 Phxr5P08399 672 aa16.25■□□□□ 0.19
Upf3a-201ENSMUST00000043767 P84751 237 aa16.25■□□□□ 0.19
Upf3a-201ENSMUST00000043767 F11rO88792 300 aa16.24■□□□□ 0.19
Upf3a-201ENSMUST00000043767 Gm21370Q3T9V6 190 aa16.23■□□□□ 0.19
Upf3a-201ENSMUST00000043767 D730001G18RikA0A087WQU7 115 aa16.23■□□□□ 0.19
Upf3a-201ENSMUST00000043767 Insl3O09107 122 aa16.23■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 192.5 ms