RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 UrahQ9CRB3 118 aa10.78□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Gp9O88186 177 aa10.78□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Wipf1Q8K1I7 493 aa10.77□□□□□ -0.68
Col5a1-201ENSMUST00000028280 ColqO35348 457 aa10.77□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Alms1Q8K4E0 3251 aa10.77□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Fhl3Q9R059 289 aa10.77□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Fxyd5P97808 178 aa10.77□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Trav9n-4A0A075B631 113 aa10.76□□□□□ -0.69
Col5a1-201ENSMUST00000028280 P04945 108 aa10.76□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Gm10542F6XDR3 90 aa10.76□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Serp1Q9Z1W5 66 aa10.75□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Dazap2Q9DCP9 168 aa10.75□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Trbv16A0A0B4J1H3 115 aa10.75□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Igkv1-110A0A0B4J1I0 119 aa10.75□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Igkv3-12A0A140T8P0 119 aa10.75□□□□□ -0.69
Col5a1-201ENSMUST00000028280 BlcapP62951 87 aa10.75□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Dmrtc1c1Q9D410 238 aa10.74□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Gm10553J3QPF1 123 aa10.74□□□□□ -0.69
Col5a1-201ENSMUST00000028280 LitafQ9JLJ0 161 aa10.74□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Rspo1Q9Z132 265 aa10.74□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Lrp4Q8VI56 1905 aa10.74□□□□□ -0.69
Col5a1-201ENSMUST00000028280 PolqQ8CGS6 2544 aa10.74□□□□□ -0.69
Col5a1-201ENSMUST00000028280 P01658 132 aa10.74□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Serp2Q6TAW2 65 aa10.74□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Q9DAQ5 155 aa10.74□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Triap1Q9D8Z2 76 aa10.73□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Gm10638F6QEG2 257 aa10.73□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Fam19a1Q7TPG8 133 aa10.73□□□□□ -0.69
Col5a1-201ENSMUST00000028280 P0C913 63 aa10.73□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Gm44965A0A0N4SVR3 59 aa10.72□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Nav2E9Q842 2432 aa10.72□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Gm15217A2CG07 155 aa10.72□□□□□ -0.69
Col5a1-201ENSMUST00000028280 P04942 107 aa10.72□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Ube2d4D3YUH6 135 aa10.72□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Gphb5Q812B2 130 aa10.71□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Esm1Q9QYY7 184 aa10.71□□□□□ -0.69
Col5a1-201ENSMUST00000028280 Fhl1P97447 280 aaKnown RBP10.71□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Ramp1Q9WTJ5 148 aa10.71□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Ufsp1Q9CZP0 217 aa10.7□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Gm21994F6T2D2 329 aa10.69□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Wdr38Q9D994 303 aa10.69□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Eif4ebp1Q60876 117 aa10.69□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Igkv8-30A0A140T8M3 121 aa10.69□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Sh2d1aO88890 126 aa10.69□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Ighv1-53A0A075B5W3 117 aa10.69□□□□□ -0.7
Col5a1-201ENSMUST00000028280 P01748 117 aa10.69□□□□□ -0.7
Col5a1-201ENSMUST00000028280 GrnP28798 589 aaKnown RBP10.69□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Plac8l1Q08EJ0 177 aa10.69□□□□□ -0.7
Col5a1-201ENSMUST00000028280 BaalcQ8VHV1 145 aa10.68□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Ighv10-3A0A075B5T6 119 aa10.68□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Ighv1-11A0A0A6YWI9 117 aa10.68□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Gm14137Q8CE97 175 aa10.68□□□□□ -0.7
Col5a1-201ENSMUST00000028280 BC107364E9Q5A2 140 aa10.68□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Gm20604F8WIA3 75 aa10.68□□□□□ -0.7
Col5a1-201ENSMUST00000028280 C1qcQ02105 246 aa10.68□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Higd2aQ9CQJ1 106 aa10.68□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Gm17677B3GLJ5 116 aa10.68□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Tcl1b3P56842 122 aa10.67□□□□□ -0.7
Col5a1-201ENSMUST00000028280 A830005F24RikQ8BRT5 167 aa10.67□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Tcl1b5P56845 121 aa10.67□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Gm17359A0A0G2JEB7 487 aa10.67□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Wfdc15bQ9JHY4 80 aa10.67□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Ighv8-5A0A0A6YY60 119 aa10.66□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Ighv10-1A0A0B4J1J6 119 aa10.66□□□□□ -0.7
Col5a1-201ENSMUST00000028280 5730596B20RikQ8BQ08 205 aa10.66□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Klk5Q9D140 293 aa10.66□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Ntf4Q80VU4 209 aa10.66□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Snai3Q9QY31 287 aa10.65□□□□□ -0.7
Col5a1-201ENSMUST00000028280 Gm19935A0A1B0GSF9 52 aa10.64□□□□□ -0.71
Col5a1-201ENSMUST00000028280 P01729 129 aa10.64□□□□□ -0.71
Col5a1-201ENSMUST00000028280 A130051J06RikQ8CAU1 227 aa10.64□□□□□ -0.71
Col5a1-201ENSMUST00000028280 Gm9805F6YK59 57 aa10.64□□□□□ -0.71
Col5a1-201ENSMUST00000028280 Ighv2-6A0A075B6A7 116 aa10.64□□□□□ -0.71
Col5a1-201ENSMUST00000028280 Ighv1-82A0A0G2JEU7 117 aa10.63□□□□□ -0.71
Col5a1-201ENSMUST00000028280 Gm15557A6PWY0 234 aa10.63□□□□□ -0.71
Col5a1-201ENSMUST00000028280 AW146154Q3TPQ7 468 aa10.63□□□□□ -0.71
Col5a1-201ENSMUST00000028280 PpdpfQ9CR37 115 aa10.62□□□□□ -0.71
Col5a1-201ENSMUST00000028280 1810032O08RikE9PZV8 113 aa10.62□□□□□ -0.71
Col5a1-201ENSMUST00000028280 Gm1968Q3T9I3 115 aa10.62□□□□□ -0.71
Col5a1-201ENSMUST00000028280 Igkv3-7A0A0G2JE31 119 aa10.62□□□□□ -0.71
Col5a1-201ENSMUST00000028280 Ighv2-7A0A075B5Q8 116 aa10.61□□□□□ -0.71
Col5a1-201ENSMUST00000028280 Wfdc11A2A5H7 82 aa10.61□□□□□ -0.71
Col5a1-201ENSMUST00000028280 Smrp1Q2MH31 260 aa10.61□□□□□ -0.71
Col5a1-201ENSMUST00000028280 Ly6hQ9WUC3 139 aa10.61□□□□□ -0.71
Col5a1-201ENSMUST00000028280 OtoglF7A4A7 2325 aa10.61□□□□□ -0.71
Col5a1-201ENSMUST00000028280 4930535I16RikQ9CUI2 172 aa10.6□□□□□ -0.71
Col5a1-201ENSMUST00000028280 Gm9887F6RFI0 207 aa10.6□□□□□ -0.71
Col5a1-201ENSMUST00000028280 Gm17324Q8C6J8 137 aa10.6□□□□□ -0.71
Col5a1-201ENSMUST00000028280 Ighv1-85A0A075B5Y6 117 aa10.6□□□□□ -0.71
Col5a1-201ENSMUST00000028280 P04943 107 aa10.6□□□□□ -0.71
Col5a1-201ENSMUST00000028280 P84751 237 aa10.59□□□□□ -0.71
Col5a1-201ENSMUST00000028280 9230109A22RikQ8BHE6 111 aa10.59□□□□□ -0.71
Col5a1-201ENSMUST00000028280 Q8K1L6 76 aa10.59□□□□□ -0.71
Col5a1-201ENSMUST00000028280 P06328 117 aa10.59□□□□□ -0.71
Col5a1-201ENSMUST00000028280 9430015G10RikA2ASP7 199 aa10.58□□□□□ -0.72
Col5a1-201ENSMUST00000028280 Apoc4Q61268 124 aa10.58□□□□□ -0.72
Col5a1-201ENSMUST00000028280 Q9D131 166 aa10.58□□□□□ -0.72
Col5a1-201ENSMUST00000028280 Ighv1-61P01749 117 aa10.58□□□□□ -0.72
Col5a1-201ENSMUST00000028280 Fgf23Q9EPC2 251 aa10.58□□□□□ -0.72
Col5a1-201ENSMUST00000028280 A0A286YE49 62 aa10.58□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 67.9 ms