RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Trav13n-1A0A0G2JEU8 110 aa8.29□□□□□ -1.08
Ciita-201ENSMUST00000023147 Nxph4G3X9N5 304 aa8.29□□□□□ -1.08
Ciita-201ENSMUST00000023147 Ang3P97802 145 aa8.29□□□□□ -1.08
Ciita-201ENSMUST00000023147 Ufsp1Q9CZP0 217 aa8.29□□□□□ -1.08
Ciita-201ENSMUST00000023147 Gm28539A0A087WSL9 92 aa8.29□□□□□ -1.08
Ciita-201ENSMUST00000023147 Gm10647E9Q8X0 124 aa8.29□□□□□ -1.08
Ciita-201ENSMUST00000023147 P01748 117 aa8.29□□□□□ -1.08
Ciita-201ENSMUST00000023147 P84750 121 aa8.29□□□□□ -1.08
Ciita-201ENSMUST00000023147 Q8K1L6 76 aa8.29□□□□□ -1.08
Ciita-201ENSMUST00000023147 Higd2aQ9CQJ1 106 aa8.29□□□□□ -1.08
Ciita-201ENSMUST00000023147 Trav7-6A0A075B640 112 aa8.28□□□□□ -1.08
Ciita-201ENSMUST00000023147 Wfdc10Q3V2J9 124 aa8.28□□□□□ -1.08
Ciita-201ENSMUST00000023147 B430305J03RikQ8BQQ8 176 aa8.28□□□□□ -1.08
Ciita-201ENSMUST00000023147 OdaphJ3QNT8 126 aa8.28□□□□□ -1.08
Ciita-201ENSMUST00000023147 Ighv1-53A0A075B5W3 117 aa8.28□□□□□ -1.08
Ciita-201ENSMUST00000023147 Znf672Q99LH4 468 aa8.28□□□□□ -1.08
Ciita-201ENSMUST00000023147 Trav13n-2A0A0G2JF93 110 aa8.27□□□□□ -1.08
Ciita-201ENSMUST00000023147 Fam19a1Q7TPG8 133 aa8.27□□□□□ -1.08
Ciita-201ENSMUST00000023147 BlcapP62951 87 aa8.27□□□□□ -1.09
Ciita-201ENSMUST00000023147 Tmem213Q08EA8 116 aa8.27□□□□□ -1.09
Ciita-201ENSMUST00000023147 9230109A22RikQ8BHE6 111 aa8.27□□□□□ -1.09
Ciita-201ENSMUST00000023147 Trav13-1A0A075B644 110 aa8.27□□□□□ -1.09
Ciita-201ENSMUST00000023147 PtprbB2RU80 1998 aa8.26□□□□□ -1.09
Ciita-201ENSMUST00000023147 P06320 134 aa8.26□□□□□ -1.09
Ciita-201ENSMUST00000023147 Ndufa4l2Q4FZG9 87 aa8.26□□□□□ -1.09
Ciita-201ENSMUST00000023147 5730596B20RikQ8BQ08 205 aa8.26□□□□□ -1.09
Ciita-201ENSMUST00000023147 Ighv12-3A0A075B5T1 117 aa8.26□□□□□ -1.09
Ciita-201ENSMUST00000023147 Igkv8-30A0A140T8M3 121 aa8.26□□□□□ -1.09
Ciita-201ENSMUST00000023147 Alms1Q8K4E0 3251 aa8.26□□□□□ -1.09
Ciita-201ENSMUST00000023147 Prr15lQ8JZM2 100 aa8.26□□□□□ -1.09
Ciita-201ENSMUST00000023147 BC107364E9Q5A2 140 aa8.25□□□□□ -1.09
Ciita-201ENSMUST00000023147 P84751 237 aa8.25□□□□□ -1.09
Ciita-201ENSMUST00000023147 Ighv2-7A0A075B5Q8 116 aa8.25□□□□□ -1.09
Ciita-201ENSMUST00000023147 Ighv1-11A0A0A6YWI9 117 aa8.25□□□□□ -1.09
Ciita-201ENSMUST00000023147 PscaP57096 123 aa8.25□□□□□ -1.09
Ciita-201ENSMUST00000023147 Gm9958Q8C9U4 106 aa8.25□□□□□ -1.09
Ciita-201ENSMUST00000023147 Edn2P22389 175 aa8.25□□□□□ -1.09
Ciita-201ENSMUST00000023147 Ly6gP35461 111 aa8.25□□□□□ -1.09
Ciita-201ENSMUST00000023147 Tcl1b3P56842 122 aa8.25□□□□□ -1.09
Ciita-201ENSMUST00000023147 Serp1Q9Z1W5 66 aa8.25□□□□□ -1.09
Ciita-201ENSMUST00000023147 Tcf20Q9EPQ8 1987 aa8.25□□□□□ -1.09
Ciita-201ENSMUST00000023147 Igkv3-12A0A140T8P0 119 aa8.24□□□□□ -1.09
Ciita-201ENSMUST00000023147 Fxyd5P97808 178 aa8.24□□□□□ -1.09
Ciita-201ENSMUST00000023147 PolqQ8CGS6 2544 aa8.24□□□□□ -1.09
Ciita-201ENSMUST00000023147 Gm5878E9PUB3 99 aa8.23□□□□□ -1.09
Ciita-201ENSMUST00000023147 Trav9n-4A0A075B631 113 aa8.23□□□□□ -1.09
Ciita-201ENSMUST00000023147 Ighv8-12A0A0G2JDE1 119 aa8.23□□□□□ -1.09
Ciita-201ENSMUST00000023147 Cox8cA6H666 72 aa8.23□□□□□ -1.09
Ciita-201ENSMUST00000023147 Gm9887F6RFI0 207 aa8.23□□□□□ -1.09
Ciita-201ENSMUST00000023147 Cryba4Q9JJV0 196 aa8.23□□□□□ -1.09
Ciita-201ENSMUST00000023147 Snai3Q9QY31 287 aa8.23□□□□□ -1.09
Ciita-201ENSMUST00000023147 Igkv1-110A0A0B4J1I0 119 aa8.23□□□□□ -1.09
Ciita-201ENSMUST00000023147 Rpl39P62892 51 aa8.23□□□□□ -1.09
Ciita-201ENSMUST00000023147 BtcQ05928 177 aa8.23□□□□□ -1.09
Ciita-201ENSMUST00000023147 Prrc2aQ7TSC1 2158 aaKnown RBP8.23□□□□□ -1.09
Ciita-201ENSMUST00000023147 Mrpl35Q9CQL6 188 aa8.23□□□□□ -1.09
Ciita-201ENSMUST00000023147 Ighv10-1A0A0B4J1J6 119 aa8.23□□□□□ -1.09
Ciita-201ENSMUST00000023147 Trbv13-1A0A0B4J1P8 112 aa8.23□□□□□ -1.09
Ciita-201ENSMUST00000023147 Pla2g2aP31482 146 aa8.23□□□□□ -1.09
Ciita-201ENSMUST00000023147 Ncoa6Q9JL19 2067 aa8.22□□□□□ -1.09
Ciita-201ENSMUST00000023147 Igkv1-35A0A0G2JDE5 120 aa8.22□□□□□ -1.09
Ciita-201ENSMUST00000023147 Col5a1O88207 1838 aa8.22□□□□□ -1.09
Ciita-201ENSMUST00000023147 Gm17359A0A0G2JEB7 487 aa8.22□□□□□ -1.09
Ciita-201ENSMUST00000023147 ColqO35348 457 aa8.22□□□□□ -1.09
Ciita-201ENSMUST00000023147 Igf1P05017 153 aa8.22□□□□□ -1.09
Ciita-201ENSMUST00000023147 Vpreb1P13372 142 aa8.22□□□□□ -1.09
Ciita-201ENSMUST00000023147 Tcl1b5P56845 121 aa8.22□□□□□ -1.09
Ciita-201ENSMUST00000023147 Sdk1Q3UH53 2193 aa8.22□□□□□ -1.09
Ciita-201ENSMUST00000023147 Abca2P41234 2434 aa8.22□□□□□ -1.09
Ciita-201ENSMUST00000023147 Gm9949Q8C9F4 104 aa8.22□□□□□ -1.09
Ciita-201ENSMUST00000023147 Pla2g2eQ9QUL3 142 aa8.22□□□□□ -1.09
Ciita-201ENSMUST00000023147 Trav13d-1A0A075B606 110 aa8.22□□□□□ -1.09
Ciita-201ENSMUST00000023147 Atox1O08997 68 aaKnown RBP8.22□□□□□ -1.09
Ciita-201ENSMUST00000023147 Cox7bP56393 80 aa8.22□□□□□ -1.09
Ciita-201ENSMUST00000023147 FshbQ60687 130 aa8.22□□□□□ -1.09
Ciita-201ENSMUST00000023147 1810032O08RikE9PZV8 113 aa8.21□□□□□ -1.09
Ciita-201ENSMUST00000023147 AW146154Q3TPQ7 468 aa8.21□□□□□ -1.09
Ciita-201ENSMUST00000023147 9430015G10RikA2ASP7 199 aa8.21□□□□□ -1.1
Ciita-201ENSMUST00000023147 Tcte2E9PY37 120 aa8.21□□□□□ -1.1
Ciita-201ENSMUST00000023147 Eif4ebp1Q60876 117 aa8.21□□□□□ -1.1
Ciita-201ENSMUST00000023147 CnfnQ6PCW6 111 aa8.21□□□□□ -1.1
Ciita-201ENSMUST00000023147 Gm12689Q8BQU9 117 aa8.21□□□□□ -1.1
Ciita-201ENSMUST00000023147 Lrrk2Q5S006 2527 aa8.21□□□□□ -1.1
Ciita-201ENSMUST00000023147 B230359F08RikA0A0B4J1K3 109 aa8.21□□□□□ -1.1
Ciita-201ENSMUST00000023147 Rnase1P00683 149 aa8.21□□□□□ -1.1
Ciita-201ENSMUST00000023147 Rpl39lQ9CQD0 51 aa8.2□□□□□ -1.1
Ciita-201ENSMUST00000023147 Gm4707V9GXN5 68 aa8.2□□□□□ -1.1
Ciita-201ENSMUST00000023147 Trav13-4-dv7A0A075B6C2 110 aa8.2□□□□□ -1.1
Ciita-201ENSMUST00000023147 Ube2d4D3YUH6 135 aa8.2□□□□□ -1.1
Ciita-201ENSMUST00000023147 Spry2Q9QXV8 315 aa8.2□□□□□ -1.1
Ciita-201ENSMUST00000023147 Q9D131 166 aa8.2□□□□□ -1.1
Ciita-201ENSMUST00000023147 Gm17324Q8C6J8 137 aa8.2□□□□□ -1.1
Ciita-201ENSMUST00000023147 Esm1Q9QYY7 184 aa8.2□□□□□ -1.1
Ciita-201ENSMUST00000023147 Gm15557A6PWY0 234 aa8.19□□□□□ -1.1
Ciita-201ENSMUST00000023147 E130114P18RikF6S0S7 154 aa8.19□□□□□ -1.1
Ciita-201ENSMUST00000023147 Znf239P24399 201 aa8.19□□□□□ -1.1
Ciita-201ENSMUST00000023147 BaalcQ8VHV1 145 aa8.19□□□□□ -1.1
Ciita-201ENSMUST00000023147 TectaO08523 2155 aa8.19□□□□□ -1.1
Ciita-201ENSMUST00000023147 Igkv1-117A0A140T8M0 119 aa8.19□□□□□ -1.1
Ciita-201ENSMUST00000023147 9130230L23RikQ8CC80 163 aa8.19□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 41.7 ms