RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 BB014433Q8C5R5 389 aa12.01□□□□□ -0.49
Trim28-201ENSMUST00000005705 Lyzl4Q9D925 145 aa12.01□□□□□ -0.49
Trim28-201ENSMUST00000005705 Mettl26Q9DCS2 204 aa12.01□□□□□ -0.49
Trim28-201ENSMUST00000005705 Tcte2E9PY37 120 aa12.01□□□□□ -0.49
Trim28-201ENSMUST00000005705 Morn5Q9DAI9 170 aa12.01□□□□□ -0.49
Trim28-201ENSMUST00000005705 Gm29423A0A087WRM1 55 aa12□□□□□ -0.49
Trim28-201ENSMUST00000005705 Fam19a4Q7TPG5 135 aa12□□□□□ -0.49
Trim28-201ENSMUST00000005705 Psmb11Q8BG41 302 aa12□□□□□ -0.49
Trim28-201ENSMUST00000005705 Gm9913Q8BQQ2 135 aa12□□□□□ -0.49
Trim28-201ENSMUST00000005705 Xirp2Q4U4S6 3784 aa12□□□□□ -0.49
Trim28-201ENSMUST00000005705 Gm4861Q8C5A4 106 aa12□□□□□ -0.49
Trim28-201ENSMUST00000005705 Mpv17l2Q8VIK2 200 aa12□□□□□ -0.49
Trim28-201ENSMUST00000005705 Rmi2Q3UPE3 149 aa11.99□□□□□ -0.49
Trim28-201ENSMUST00000005705 Polr2kQ63871 58 aa11.99□□□□□ -0.49
Trim28-201ENSMUST00000005705 Ndufb4Q9CQC7 129 aa11.99□□□□□ -0.49
Trim28-201ENSMUST00000005705 Sprr3O09116 238 aa11.99□□□□□ -0.49
Trim28-201ENSMUST00000005705 P01753 117 aa11.99□□□□□ -0.49
Trim28-201ENSMUST00000005705 Dynlrb2Q9DAJ5 96 aa11.99□□□□□ -0.49
Trim28-201ENSMUST00000005705 Defa4P28311 92 aa11.99□□□□□ -0.49
Trim28-201ENSMUST00000005705 Gphb5Q812B2 130 aa11.98□□□□□ -0.49
Trim28-201ENSMUST00000005705 Gm10735Q3US96 136 aa11.98□□□□□ -0.49
Trim28-201ENSMUST00000005705 Ndufa3Q9CQ91 84 aa11.98□□□□□ -0.49
Trim28-201ENSMUST00000005705 NpwA0A1L1STR8 176 aa11.97□□□□□ -0.49
Trim28-201ENSMUST00000005705 Klk1b4P00757 256 aa11.97□□□□□ -0.49
Trim28-201ENSMUST00000005705 AngP21570 145 aa11.97□□□□□ -0.49
Trim28-201ENSMUST00000005705 Atp5g3P56384 141 aa11.97□□□□□ -0.49
Trim28-201ENSMUST00000005705 Ighv1-75A0A075B5Y2 117 aa11.97□□□□□ -0.49
Trim28-201ENSMUST00000005705 Smim10l1A0A087WNQ7 89 aa11.97□□□□□ -0.49
Trim28-201ENSMUST00000005705 Trav9n-2A0A0G2JDP3 113 aa11.97□□□□□ -0.49
Trim28-201ENSMUST00000005705 Usmg5Q78IK2 58 aa11.97□□□□□ -0.49
Trim28-201ENSMUST00000005705 1500011B03RikQ3TTH7 73 aa11.96□□□□□ -0.49
Trim28-201ENSMUST00000005705 Trav4n-4A0A075B615 110 aa11.96□□□□□ -0.49
Trim28-201ENSMUST00000005705 Ighv3-3A0A0A6YWL2 116 aa11.96□□□□□ -0.49
Trim28-201ENSMUST00000005705 Atp6v0e2Q91XE7 81 aa11.96□□□□□ -0.49
Trim28-201ENSMUST00000005705 Tex15F8VPN2 2785 aa11.96□□□□□ -0.5
Trim28-201ENSMUST00000005705 Gm37988J3QM41 62 aa11.96□□□□□ -0.5
Trim28-201ENSMUST00000005705 Mfap4Q9D1H9 257 aa11.96□□□□□ -0.5
Trim28-201ENSMUST00000005705 Trav7-6A0A075B640 112 aa11.95□□□□□ -0.5
Trim28-201ENSMUST00000005705 Reg3gO09049 174 aa11.95□□□□□ -0.5
Trim28-201ENSMUST00000005705 Rbmy1bQ60990 380 aa11.95□□□□□ -0.5
Trim28-201ENSMUST00000005705 Tmem263Q9DAM7 115 aa11.95□□□□□ -0.5
Trim28-201ENSMUST00000005705 Gm904Q3V2L5 102 aa11.95□□□□□ -0.5
Trim28-201ENSMUST00000005705 Ighv12-3A0A075B5T1 117 aa11.94□□□□□ -0.5
Trim28-201ENSMUST00000005705 Snrpd3P62320 126 aaKnown RBP11.94□□□□□ -0.5
Trim28-201ENSMUST00000005705 Gata1P17679 413 aa11.94□□□□□ -0.5
Trim28-201ENSMUST00000005705 P84751 237 aa11.94□□□□□ -0.5
Trim28-201ENSMUST00000005705 Q9DAB9 146 aa11.94□□□□□ -0.5
Trim28-201ENSMUST00000005705 Ighv2-3A0A075B696 115 aa11.93□□□□□ -0.5
Trim28-201ENSMUST00000005705 LeprotO89013 131 aa11.93□□□□□ -0.5
Trim28-201ENSMUST00000005705 Notch1Q01705 2531 aa11.93□□□□□ -0.5
Trim28-201ENSMUST00000005705 Gm10767Q3TQP0 103 aa11.92□□□□□ -0.5
Trim28-201ENSMUST00000005705 4930415O20RikQ8CDT5 131 aa11.92□□□□□ -0.5
Trim28-201ENSMUST00000005705 Synj2bpQ9D6K5 145 aa11.92□□□□□ -0.5
Trim28-201ENSMUST00000005705 Rpl32-psP17932 135 aa11.91□□□□□ -0.5
Trim28-201ENSMUST00000005705 A530064D06RikQ8BNV8 229 aa11.91□□□□□ -0.5
Trim28-201ENSMUST00000005705 Lgals4Q8K419 326 aa11.91□□□□□ -0.5
Trim28-201ENSMUST00000005705 Gm20726G3UX18 150 aa11.91□□□□□ -0.5
Trim28-201ENSMUST00000005705 Wdr38Q9D994 303 aa11.91□□□□□ -0.5
Trim28-201ENSMUST00000005705 Timm17aQ9Z0V8 171 aa11.91□□□□□ -0.5
Trim28-201ENSMUST00000005705 AtrQ9JKK8 2635 aa11.91□□□□□ -0.5
Trim28-201ENSMUST00000005705 Dmbt1Q60997 2085 aa11.91□□□□□ -0.5
Trim28-201ENSMUST00000005705 FlnbQ80X90 2602 aaKnown RBP11.91□□□□□ -0.5
Trim28-201ENSMUST00000005705 Ighv1-72P01751 139 aa11.9□□□□□ -0.5
Trim28-201ENSMUST00000005705 BC025920Q3US60 128 aa11.9□□□□□ -0.5
Trim28-201ENSMUST00000005705 PtprqP0C5E4 2300 aa11.9□□□□□ -0.5
Trim28-201ENSMUST00000005705 Gm10322F7D7I4 111 aa11.9□□□□□ -0.51
Trim28-201ENSMUST00000005705 Prh1P05142 261 aa11.9□□□□□ -0.51
Trim28-201ENSMUST00000005705 TtrP07309 147 aa11.9□□□□□ -0.51
Trim28-201ENSMUST00000005705 Defa25Q5G864 92 aa11.9□□□□□ -0.51
Trim28-201ENSMUST00000005705 Trdv5A0A075B661 115 aa11.89□□□□□ -0.51
Trim28-201ENSMUST00000005705 Gm26661M0QWV4 156 aa11.88□□□□□ -0.51
Trim28-201ENSMUST00000005705 Gm20499D3Z4G5 72 aa11.88□□□□□ -0.51
Trim28-201ENSMUST00000005705 Foxc1Q61572 553 aa11.88□□□□□ -0.51
Trim28-201ENSMUST00000005705 Znf740Q6NZQ6 180 aa11.88□□□□□ -0.51
Trim28-201ENSMUST00000005705 Ighv1-66A0A075B5X5 117 aa11.88□□□□□ -0.51
Trim28-201ENSMUST00000005705 Pglyrp1O88593 182 aa11.88□□□□□ -0.51
Trim28-201ENSMUST00000005705 Phlda3Q9WV95 125 aa11.88□□□□□ -0.51
Trim28-201ENSMUST00000005705 Defb26Q30KN7 186 aa11.87□□□□□ -0.51
Trim28-201ENSMUST00000005705 Gm10542F6XDR3 90 aa11.87□□□□□ -0.51
Trim28-201ENSMUST00000005705 Defb18Q30KP5 85 aa11.86□□□□□ -0.51
Trim28-201ENSMUST00000005705 Cfap126Q6P8X9 189 aa11.86□□□□□ -0.51
Trim28-201ENSMUST00000005705 Gm10226O88253 85 aa11.86□□□□□ -0.51
Trim28-201ENSMUST00000005705 Smr3aQ61900 147 aa11.86□□□□□ -0.51
Trim28-201ENSMUST00000005705 Gm10490F6VBM2 120 aa11.85□□□□□ -0.51
Trim28-201ENSMUST00000005705 4930544G11RikQ9CR99 193 aa11.85□□□□□ -0.51
Trim28-201ENSMUST00000005705 Hspg2Q05793 3707 aaKnown RBP11.85□□□□□ -0.51
Trim28-201ENSMUST00000005705 Trav13n-1A0A0G2JEU8 110 aa11.85□□□□□ -0.51
Trim28-201ENSMUST00000005705 4930470P17RikQ9D542 155 aa11.85□□□□□ -0.51
Trim28-201ENSMUST00000005705 Fam216aQ9DB54 251 aa11.85□□□□□ -0.51
Trim28-201ENSMUST00000005705 Csdc2Q91YQ3 154 aa11.84□□□□□ -0.51
Trim28-201ENSMUST00000005705 Ighv1-52A0A0A6YXC3 117 aa11.84□□□□□ -0.51
Trim28-201ENSMUST00000005705 Gm10300Q8C8P7 189 aa11.84□□□□□ -0.51
Trim28-201ENSMUST00000005705 Rnf183Q8QZS5 190 aa11.84□□□□□ -0.51
Trim28-201ENSMUST00000005705 SpinklQ8CEK3 90 aa11.84□□□□□ -0.51
Trim28-201ENSMUST00000005705 Ube2wQ8VDW4 151 aa11.83□□□□□ -0.52
Trim28-201ENSMUST00000005705 Trbv16A0A0B4J1H3 115 aa11.83□□□□□ -0.52
Trim28-201ENSMUST00000005705 Ighv1-85A0A075B5Y6 117 aa11.82□□□□□ -0.52
Trim28-201ENSMUST00000005705 B230217C12RikE9Q3Z1 139 aa11.82□□□□□ -0.52
Trim28-201ENSMUST00000005705 Gm815Q3UWS2 115 aa11.82□□□□□ -0.52
Trim28-201ENSMUST00000005705 Igkv4-69A0A0B4J1I6 116 aa11.82□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms