RNA–Protein interactions for RNA: ENSMUST00000180353.1

Sox1-201, Transcript of Transcription factor SOX-1, mousemouse

APPRIS P1 BASIC

Gene Sox1, Length 4,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1-201ENSMUST00000180353 2310009B15RikA0A0A6YWI4 143 aa16.32■□□□□ 0.2
Sox1-201ENSMUST00000180353 Ube2e2Q91W82 201 aa16.31■□□□□ 0.2
Sox1-201ENSMUST00000180353 Adamts20P59511 1906 aa16.31■□□□□ 0.2
Sox1-201ENSMUST00000180353 DysfQ9ESD7 2090 aa16.31■□□□□ 0.2
Sox1-201ENSMUST00000180353 F5O88783 2183 aa16.31■□□□□ 0.2
Sox1-201ENSMUST00000180353 Synj2bpQ9D6K5 145 aa16.31■□□□□ 0.2
Sox1-201ENSMUST00000180353 Reg3dQ9QUS9 175 aa16.31■□□□□ 0.2
Sox1-201ENSMUST00000180353 Ighv1-4A0A075B5T4 117 aa16.3■□□□□ 0.2
Sox1-201ENSMUST00000180353 P01738 130 aa16.3■□□□□ 0.2
Sox1-201ENSMUST00000180353 Igkv4-59A0A0B4J1I8 117 aa16.3■□□□□ 0.2
Sox1-201ENSMUST00000180353 Igkv8-24A0A140T8P5 121 aa16.29■□□□□ 0.2
Sox1-201ENSMUST00000180353 Spry2Q9QXV8 315 aa16.29■□□□□ 0.2
Sox1-201ENSMUST00000180353 Timm17bQ9Z0V7 172 aa16.29■□□□□ 0.2
Sox1-201ENSMUST00000180353 Igkv1-99F6XWB2 120 aa16.28■□□□□ 0.2
Sox1-201ENSMUST00000180353 Igkv4-54A0A0G2JES9 117 aa16.28■□□□□ 0.2
Sox1-201ENSMUST00000180353 Fam19a5Q91WE9 132 aa16.28■□□□□ 0.2
Sox1-201ENSMUST00000180353 Ighv1-53A0A075B5W3 117 aa16.28■□□□□ 0.2
Sox1-201ENSMUST00000180353 Sh2d1aO88890 126 aa16.28■□□□□ 0.2
Sox1-201ENSMUST00000180353 Igkv8-16A0A0G2JDG9 121 aa16.27■□□□□ 0.2
Sox1-201ENSMUST00000180353 Gm5878E9PUB3 99 aa16.27■□□□□ 0.2
Sox1-201ENSMUST00000180353 CnfnQ6PCW6 111 aa16.27■□□□□ 0.2
Sox1-201ENSMUST00000180353 AW146154Q3TPQ7 468 aa16.27■□□□□ 0.2
Sox1-201ENSMUST00000180353 P01753 117 aa16.27■□□□□ 0.19
Sox1-201ENSMUST00000180353 Dand5Q76LW6 185 aa16.26■□□□□ 0.19
Sox1-201ENSMUST00000180353 FcorP0DJI6 106 aa16.26■□□□□ 0.19
Sox1-201ENSMUST00000180353 SrarpQ3ULG3 163 aa16.26■□□□□ 0.19
Sox1-201ENSMUST00000180353 Igkv4-57A0A0A6YYE7 117 aa16.26■□□□□ 0.19
Sox1-201ENSMUST00000180353 LoxP28301 411 aa16.26■□□□□ 0.19
Sox1-201ENSMUST00000180353 Ndufs7Q9DC70 224 aa16.26■□□□□ 0.19
Sox1-201ENSMUST00000180353 Igkv4-72A0A0B4J1I4 117 aa16.25■□□□□ 0.19
Sox1-201ENSMUST00000180353 Sox16Q62247 57 aa16.25■□□□□ 0.19
Sox1-201ENSMUST00000180353 BC048502Q80Y74 154 aa16.25■□□□□ 0.19
Sox1-201ENSMUST00000180353 Tet1Q3URK3 2007 aaKnown RBP16.25■□□□□ 0.19
Sox1-201ENSMUST00000180353 B430305J03RikQ8BQQ8 176 aa16.25■□□□□ 0.19
Sox1-201ENSMUST00000180353 Fxyd5P97808 178 aa16.24■□□□□ 0.19
Sox1-201ENSMUST00000180353 Wfdc15bQ9JHY4 80 aa16.24■□□□□ 0.19
Sox1-201ENSMUST00000180353 Ighv5-9-1A0A0A6YVS4 126 aa16.24■□□□□ 0.19
Sox1-201ENSMUST00000180353 Igkv4-74A0A0B4J1I3 119 aa16.24■□□□□ 0.19
Sox1-201ENSMUST00000180353 Prp2P05143 317 aa16.24■□□□□ 0.19
Sox1-201ENSMUST00000180353 Ly6hQ9WUC3 139 aa16.24■□□□□ 0.19
Sox1-201ENSMUST00000180353 Ighv1-11A0A0A6YWI9 117 aa16.23■□□□□ 0.19
Sox1-201ENSMUST00000180353 Cyyr1Q8VIH7 165 aa16.23■□□□□ 0.19
Sox1-201ENSMUST00000180353 Gm9958Q8C9U4 106 aa16.23■□□□□ 0.19
Sox1-201ENSMUST00000180353 Igkv4-69A0A0B4J1I6 116 aa16.22■□□□□ 0.19
Sox1-201ENSMUST00000180353 Ighv1-61P01749 117 aa16.22■□□□□ 0.19
Sox1-201ENSMUST00000180353 Dad1P61804 113 aa16.22■□□□□ 0.19
Sox1-201ENSMUST00000180353 P01786 117 aa16.22■□□□□ 0.19
Sox1-201ENSMUST00000180353 Prr13Q9CQJ5 137 aa16.22■□□□□ 0.19
Sox1-201ENSMUST00000180353 P06328 117 aa16.22■□□□□ 0.19
Sox1-201ENSMUST00000180353 Igkv2-109A0A075B5K6 120 aa16.22■□□□□ 0.19
Sox1-201ENSMUST00000180353 EnhoQ8K1D8 76 aa16.21■□□□□ 0.19
Sox1-201ENSMUST00000180353 Trav13n-2A0A0G2JF93 110 aa16.21■□□□□ 0.19
Sox1-201ENSMUST00000180353 Cela2aP05208 271 aa16.21■□□□□ 0.19
Sox1-201ENSMUST00000180353 1520401A03RikA0A0J9YVH6 598 aa16.21■□□□□ 0.18
Sox1-201ENSMUST00000180353 E030018B13RikJ3QMS9 113 aa16.21■□□□□ 0.18
Sox1-201ENSMUST00000180353 Gata4Q08369 441 aa16.2■□□□□ 0.18
Sox1-201ENSMUST00000180353 Piezo2Q8CD54 2822 aa16.2■□□□□ 0.18
Sox1-201ENSMUST00000180353 4930432M17RikQ3V0W9 174 aa16.2■□□□□ 0.18
Sox1-201ENSMUST00000180353 Apoc4Q61268 124 aa16.2■□□□□ 0.18
Sox1-201ENSMUST00000180353 Ighv1-75A0A075B5Y2 117 aa16.2■□□□□ 0.18
Sox1-201ENSMUST00000180353 Ighv1-12A0A0A6YXJ9 117 aa16.19■□□□□ 0.18
Sox1-201ENSMUST00000180353 Odf1Q61999 247 aa16.19■□□□□ 0.18
Sox1-201ENSMUST00000180353 Zc2hc1bQ9D534 172 aa16.19■□□□□ 0.18
Sox1-201ENSMUST00000180353 Prop1P97458 223 aa16.19■□□□□ 0.18
Sox1-201ENSMUST00000180353 Gm16223Q8CBM3 117 aa16.19■□□□□ 0.18
Sox1-201ENSMUST00000180353 Gm7075D3Z497 112 aa16.19■□□□□ 0.18
Sox1-201ENSMUST00000180353 Abca4O35600 2310 aa16.18■□□□□ 0.18
Sox1-201ENSMUST00000180353 Ep300B2RWS6 2412 aa16.18■□□□□ 0.18
Sox1-201ENSMUST00000180353 Vmo1Q5SXG7 201 aa16.18■□□□□ 0.18
Sox1-201ENSMUST00000180353 5730596B20RikQ8BQ08 205 aa16.18■□□□□ 0.18
Sox1-201ENSMUST00000180353 Gm10135F6TEE5 83 aa16.16■□□□□ 0.18
Sox1-201ENSMUST00000180353 CrygdP04342 174 aa16.16■□□□□ 0.18
Sox1-201ENSMUST00000180353 Ucn2Q99ML8 113 aa16.16■□□□□ 0.18
Sox1-201ENSMUST00000180353 Ighv8-11A0A075B5X4 119 aa16.16■□□□□ 0.18
Sox1-201ENSMUST00000180353 Gm10542F6XDR3 90 aa16.15■□□□□ 0.18
Sox1-201ENSMUST00000180353 TshbP12656 138 aa16.15■□□□□ 0.18
Sox1-201ENSMUST00000180353 Ighv1-85A0A075B5Y6 117 aa16.15■□□□□ 0.18
Sox1-201ENSMUST00000180353 Gm4861Q8C5A4 106 aa16.15■□□□□ 0.18
Sox1-201ENSMUST00000180353 Gm9970F6ZED4 185 aa16.14■□□□□ 0.17
Sox1-201ENSMUST00000180353 Prrc2aQ7TSC1 2158 aaKnown RBP16.14■□□□□ 0.17
Sox1-201ENSMUST00000180353 Igkv4-58A0A0G2JGI6 119 aa16.14■□□□□ 0.17
Sox1-201ENSMUST00000180353 Pde6gP09174 87 aa16.14■□□□□ 0.17
Sox1-201ENSMUST00000180353 A130051J06RikQ8CAU1 227 aa16.14■□□□□ 0.17
Sox1-201ENSMUST00000180353 Igkv4-78A0A0A6YYE5 119 aa16.13■□□□□ 0.17
Sox1-201ENSMUST00000180353 9230102O04RikA2ASX7 82 aa16.13■□□□□ 0.17
Sox1-201ENSMUST00000180353 Ebi3O35228 228 aa16.13■□□□□ 0.17
Sox1-201ENSMUST00000180353 Tcf20Q9EPQ8 1987 aa16.13■□□□□ 0.17
Sox1-201ENSMUST00000180353 Defb12Q8K4N3 78 aa16.13■□□□□ 0.17
Sox1-201ENSMUST00000180353 Serp1Q9Z1W5 66 aa16.13■□□□□ 0.17
Sox1-201ENSMUST00000180353 Wdr90Q6ZPG2 1874 aa16.13■□□□□ 0.17
Sox1-201ENSMUST00000180353 Ighv3-1A0A075B5S6 116 aa16.12■□□□□ 0.17
Sox1-201ENSMUST00000180353 Ighv2-6-8A0A0A6YWY9 116 aa16.12■□□□□ 0.17
Sox1-201ENSMUST00000180353 P01729 129 aa16.12■□□□□ 0.17
Sox1-201ENSMUST00000180353 Cspg4Q8VHY0 2327 aa16.12■□□□□ 0.17
Sox1-201ENSMUST00000180353 Gm6899Q3USS0 134 aa16.12■□□□□ 0.17
Sox1-201ENSMUST00000180353 P01747 120 aa16.11■□□□□ 0.17
Sox1-201ENSMUST00000180353 Reg3gO09049 174 aa16.11■□□□□ 0.17
Sox1-201ENSMUST00000180353 Rpl39lQ9CQD0 51 aa16.11■□□□□ 0.17
Sox1-201ENSMUST00000180353 Gm17472A0A075B683 117 aa16.11■□□□□ 0.17
Sox1-201ENSMUST00000180353 Ighv1-82A0A0G2JEU7 117 aa16.11■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 67.3 ms