RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Crip1P63254 77 aa13.45□□□□□ -0.26
Pcf11-201ENSMUST00000119954 NpwA0A1L1STR8 176 aa13.45□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Ndufb1P0DN34 57 aa13.45□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Trav14-1A0A0G2JF94 121 aa13.45□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Obox8V9GWY9 217 aa13.45□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Ntf4Q80VU4 209 aa13.44□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Abca4O35600 2310 aa13.44□□□□□ -0.26
Pcf11-201ENSMUST00000119954 9230109A22RikQ8BHE6 111 aa13.44□□□□□ -0.26
Pcf11-201ENSMUST00000119954 P04944 107 aa13.44□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Greb1Q3UHK3 1954 aa13.44□□□□□ -0.26
Pcf11-201ENSMUST00000119954 MylkQ6PDN3 1941 aaKnown RBP13.44□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Notch3Q61982 2318 aa13.44□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Hoxb4P10284 250 aa13.44□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Rbx1P62878 108 aa13.43□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Gphb5Q812B2 130 aa13.43□□□□□ -0.26
Pcf11-201ENSMUST00000119954 BlcapP62951 87 aa13.43□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Tsc2Q61037 1814 aa13.43□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Dock3Q8CIQ7 2027 aa13.43□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Rnf152Q8BG47 203 aa13.42□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Sbf2E9PXF8 1872 aa13.42□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Rp1P56716 2095 aa13.42□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Heatr5aQ5PRF0 2038 aa13.42□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Ube2d4D3YUH6 135 aa13.42□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Trav9n-4A0A075B631 113 aa13.41□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Wdr38Q9D994 303 aa13.41□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Mlst8Q9DCJ1 326 aa13.41□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Ighv2-7A0A075B5Q8 116 aa13.41□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Igkv8-21A0A140T8P7 120 aa13.41□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Col11a1Q61245 1804 aa13.41□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Atox1O08997 68 aaKnown RBP13.41□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Gm14137Q8CE97 175 aa13.41□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Arfgef3Q3UGY8 2170 aa13.41□□□□□ -0.26
Pcf11-201ENSMUST00000119954 P06320 134 aa13.41□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Gm5468Q8C3D3 155 aa13.4□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Q9D131 166 aa13.4□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Serp2Q6TAW2 65 aa13.4□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Defb13Q8R2I4 64 aa13.4□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Ndufa4l2Q4FZG9 87 aa13.4□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Klk5Q9D140 293 aa13.4□□□□□ -0.26
Pcf11-201ENSMUST00000119954 CtrlQ9ER05 264 aa13.4□□□□□ -0.26
Pcf11-201ENSMUST00000119954 C1qcQ02105 246 aa13.39□□□□□ -0.27
Pcf11-201ENSMUST00000119954 1810032O08RikE9PZV8 113 aa13.39□□□□□ -0.27
Pcf11-201ENSMUST00000119954 Pcnx1Q9QYC1 2344 aa13.39□□□□□ -0.27
Pcf11-201ENSMUST00000119954 Prpf8Q99PV0 2335 aaKnown RBP13.38□□□□□ -0.27
Pcf11-201ENSMUST00000119954 P01674 108 aa13.38□□□□□ -0.27
Pcf11-201ENSMUST00000119954 P04943 107 aa13.38□□□□□ -0.27
Pcf11-201ENSMUST00000119954 Myo7bQ99MZ6 2113 aa13.38□□□□□ -0.27
Pcf11-201ENSMUST00000119954 Gm10337F7DEP7 55 aa13.38□□□□□ -0.27
Pcf11-201ENSMUST00000119954 P84751 237 aa13.38□□□□□ -0.27
Pcf11-201ENSMUST00000119954 Eif4ebp1Q60876 117 aa13.38□□□□□ -0.27
Pcf11-201ENSMUST00000119954 Gm21060J3KMU4 56 aa13.38□□□□□ -0.27
Pcf11-201ENSMUST00000119954 Odf3l1Q810P2 275 aa13.38□□□□□ -0.27
Pcf11-201ENSMUST00000119954 Gm1968Q3T9I3 115 aa13.37□□□□□ -0.27
Pcf11-201ENSMUST00000119954 Gm9949Q8C9F4 104 aa13.37□□□□□ -0.27
Pcf11-201ENSMUST00000119954 Arid2E9Q7E2 1828 aa13.36□□□□□ -0.27
Pcf11-201ENSMUST00000119954 Gm12689Q8BQU9 117 aa13.36□□□□□ -0.27
Pcf11-201ENSMUST00000119954 Esm1Q9QYY7 184 aa13.36□□□□□ -0.27
Pcf11-201ENSMUST00000119954 Ufsp1Q9CZP0 217 aa13.35□□□□□ -0.27
Pcf11-201ENSMUST00000119954 Cox7bP56393 80 aa13.35□□□□□ -0.27
Pcf11-201ENSMUST00000119954 AW146154Q3TPQ7 468 aa13.35□□□□□ -0.27
Pcf11-201ENSMUST00000119954 4930470P17RikQ9D542 155 aa13.35□□□□□ -0.27
Pcf11-201ENSMUST00000119954 P06328 117 aa13.35□□□□□ -0.27
Pcf11-201ENSMUST00000119954 H2al1mQ9DAD9 105 aa13.35□□□□□ -0.27
Pcf11-201ENSMUST00000119954 Ighv1-61P01749 117 aa13.35□□□□□ -0.27
Pcf11-201ENSMUST00000119954 Lypd6Q8BPP5 171 aa13.34□□□□□ -0.27
Pcf11-201ENSMUST00000119954 Ighv12-3A0A075B5T1 117 aa13.34□□□□□ -0.27
Pcf11-201ENSMUST00000119954 Wfdc10Q3V2J9 124 aa13.34□□□□□ -0.27
Pcf11-201ENSMUST00000119954 Wipf1Q8K1I7 493 aa13.34□□□□□ -0.27
Pcf11-201ENSMUST00000119954 Timm17bQ9Z0V7 172 aa13.34□□□□□ -0.27
Pcf11-201ENSMUST00000119954 Cnot1Q6ZQ08 2375 aaKnown RBP13.34□□□□□ -0.27
Pcf11-201ENSMUST00000119954 Igkv1-117A0A140T8M0 119 aa13.33□□□□□ -0.28
Pcf11-201ENSMUST00000119954 Tcl1b3P56842 122 aa13.33□□□□□ -0.28
Pcf11-201ENSMUST00000119954 Fam19a1Q7TPG8 133 aa13.33□□□□□ -0.28
Pcf11-201ENSMUST00000119954 Plxnd1Q3UH93 1925 aa13.33□□□□□ -0.28
Pcf11-201ENSMUST00000119954 Igkv1-110A0A0B4J1I0 119 aa13.33□□□□□ -0.28
Pcf11-201ENSMUST00000119954 StrcQ8VIM6 1809 aa13.33□□□□□ -0.28
Pcf11-201ENSMUST00000119954 Ighv8-5A0A0A6YY60 119 aa13.32□□□□□ -0.28
Pcf11-201ENSMUST00000119954 E030018B13RikJ3QMS9 113 aa13.32□□□□□ -0.28
Pcf11-201ENSMUST00000119954 Sh2d1aO88890 126 aa13.32□□□□□ -0.28
Pcf11-201ENSMUST00000119954 Gm10647E9Q8X0 124 aa13.32□□□□□ -0.28
Pcf11-201ENSMUST00000119954 H2al1kJ3QP08 105 aa13.31□□□□□ -0.28
Pcf11-201ENSMUST00000119954 Trip12G5E870 2025 aaKnown RBP13.31□□□□□ -0.28
Pcf11-201ENSMUST00000119954 Sbf1Q6ZPE2 1867 aa13.31□□□□□ -0.28
Pcf11-201ENSMUST00000119954 Scn10aQ6QIY3 1958 aa13.31□□□□□ -0.28
Pcf11-201ENSMUST00000119954 Gm15557A6PWY0 234 aa13.31□□□□□ -0.28
Pcf11-201ENSMUST00000119954 Ly6hQ9WUC3 139 aa13.31□□□□□ -0.28
Pcf11-201ENSMUST00000119954 Odf3Q920N1 254 aa13.3□□□□□ -0.28
Pcf11-201ENSMUST00000119954 Crybg1A0A0G2JG52 2065 aa13.3□□□□□ -0.28
Pcf11-201ENSMUST00000119954 Jmjd1cQ69ZK6 2350 aa13.29□□□□□ -0.28
Pcf11-201ENSMUST00000119954 Parp4E9PYK3 1969 aa13.29□□□□□ -0.28
Pcf11-201ENSMUST00000119954 Igkv3-12A0A140T8P0 119 aa13.29□□□□□ -0.28
Pcf11-201ENSMUST00000119954 Gm5878E9PUB3 99 aa13.29□□□□□ -0.28
Pcf11-201ENSMUST00000119954 P01658 132 aa13.29□□□□□ -0.28
Pcf11-201ENSMUST00000119954 P18527 97 aa13.29□□□□□ -0.28
Pcf11-201ENSMUST00000119954 MyofQ69ZN7 2048 aaKnown RBP13.29□□□□□ -0.28
Pcf11-201ENSMUST00000119954 A830005F24RikQ8BRT5 167 aa13.28□□□□□ -0.28
Pcf11-201ENSMUST00000119954 A130051J06RikQ8CAU1 227 aa13.28□□□□□ -0.28
Pcf11-201ENSMUST00000119954 Ighv10-1A0A0B4J1J6 119 aa13.28□□□□□ -0.28
Pcf11-201ENSMUST00000119954 Ighv1-75A0A075B5Y2 117 aa13.28□□□□□ -0.28
Pcf11-201ENSMUST00000119954 Rnase1P00683 149 aa13.28□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 64.9 ms