RNA–Protein interactions for RNA: ENSMUST00000113054.8

Shroom3-202, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-202ENSMUST00000113054 Hrct1Q9D6B9 109 aa11.1□□□□□ -0.63
Shroom3-202ENSMUST00000113054 2010109I03RikQ9CQ11 111 aa11.09□□□□□ -0.63
Shroom3-202ENSMUST00000113054 SonQ9QX47 2444 aaKnown RBP11.09□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Ly6c2P0CW03 131 aa11.09□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Gm37389A0A0A6YW05 95 aa11.09□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Spink8Q09TK9 105 aa11.09□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Igkv4-92A0A0B4J1I2 117 aa11.08□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Ccl25O35903 144 aa11.08□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Wfdc2Q9DAU7 174 aa11.08□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Ighv1-62-1A0A075B5U3 116 aa11.07□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Ighv1-62-2A0A0A6YXZ4 119 aa11.07□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Gm9936Q8C864 160 aa11.07□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Tnfrsf23Q9ER63 176 aa11.07□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Gphb5Q812B2 130 aa11.07□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Ighv8-12A0A0G2JDE1 119 aa11.07□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Wnk1P83741 2377 aa11.07□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Trav7-6A0A075B640 112 aa11.06□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Sec16aA2AIX1 2377 aa11.06□□□□□ -0.64
Shroom3-202ENSMUST00000113054 P01820 115 aa11.06□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Fam222aQ6PGH4 453 aa11.06□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Jmjd1cQ69ZK6 2350 aa11.06□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Gm15217A2CG07 155 aa11.06□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Gm42674D3YUT9 64 aa11.06□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Fam241bQ9D882 120 aa11.06□□□□□ -0.64
Shroom3-202ENSMUST00000113054 E130114P18RikF6S0S7 154 aa11.04□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Vsig4F6TUL9 280 aa11.04□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Prr12E9PYL2 2035 aaKnown RBP11.04□□□□□ -0.64
Shroom3-202ENSMUST00000113054 AngP21570 145 aa11.04□□□□□ -0.64
Shroom3-202ENSMUST00000113054 AW146154Q3TPQ7 468 aa11.04□□□□□ -0.64
Shroom3-202ENSMUST00000113054 MgamB5THE2 1827 aa11.04□□□□□ -0.64
Shroom3-202ENSMUST00000113054 FshbQ60687 130 aa11.04□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Med13lQ6JPI3 2207 aa11.03□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Parp4E9PYK3 1969 aa11.03□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Edn2P22389 175 aa11.03□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Cryba4Q9JJV0 196 aa11.03□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Ighv1-11A0A0A6YWI9 117 aa11.03□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Igkv8-21A0A140T8P7 120 aa11.03□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Gm9925F6T2U3 160 aa11.03□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Brk1Q91VR8 75 aa11.03□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Gm12057A0A087WR21 115 aa11.02□□□□□ -0.64
Shroom3-202ENSMUST00000113054 Zfand3Q497H0 227 aa11.02□□□□□ -0.64
Shroom3-202ENSMUST00000113054 P06328 117 aa11.02□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Wipf1Q8K1I7 493 aa11.02□□□□□ -0.65
Shroom3-202ENSMUST00000113054 IgipA0A1B0GR74 53 aa11.02□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Gm17521F6QAC8 156 aa11.02□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Odf3l1Q810P2 275 aa11.02□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Tmem223Q9CQE2 199 aaKnown RBP11.02□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Arhgef17Q80U35 2057 aa11.02□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Ufsp1Q9CZP0 217 aa11.02□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Trav12d-3A0A075B6A4 115 aa11.01□□□□□ -0.65
Shroom3-202ENSMUST00000113054 9430069I07RikQ9CX21 111 aa11.01□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Rpl39lQ9CQD0 51 aa11.01□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Igkv1-117A0A140T8M0 119 aa11.01□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Ep300B2RWS6 2412 aa11.01□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Ncoa6Q9JL19 2067 aa11.01□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Gm9958Q8C9U4 106 aa11□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Defb13Q8R2I4 64 aa11□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Fam19a5Q91WE9 132 aa11□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Lmo4P61969 165 aa11□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Gm14137Q8CE97 175 aa11□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Gm4707V9GXN5 68 aa11□□□□□ -0.65
Shroom3-202ENSMUST00000113054 E030018B13RikJ3QMS9 113 aa10.99□□□□□ -0.65
Shroom3-202ENSMUST00000113054 P01729 129 aa10.99□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Wdr90Q6ZPG2 1874 aa10.99□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Vpreb3D3Z6J4 130 aa10.99□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Sprr3O09116 238 aa10.99□□□□□ -0.65
Shroom3-202ENSMUST00000113054 HelzQ6DFV5 1964 aaKnown RBP10.99□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Gm17359A0A0G2JEB7 487 aa10.99□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Dkk4Q8VEJ3 221 aa10.99□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Notch4P31695 1964 aa10.99□□□□□ -0.65
Shroom3-202ENSMUST00000113054 A230072I06RikQ3UUJ8 172 aa10.99□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Iglc1A0A0G2JE99 106 aa10.98□□□□□ -0.65
Shroom3-202ENSMUST00000113054 P01843 105 aa10.98□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Gvin1Q80SU7 2427 aa10.98□□□□□ -0.65
Shroom3-202ENSMUST00000113054 P04943 107 aa10.98□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Col24a1Q30D77 1733 aa10.98□□□□□ -0.65
Shroom3-202ENSMUST00000113054 1520401A03RikA0A0J9YVH6 598 aa10.98□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Naa38Q9D2U5 125 aa10.98□□□□□ -0.65
Shroom3-202ENSMUST00000113054 DysfQ9ESD7 2090 aa10.98□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Oxld1Q9CR10 201 aa10.97□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Tmem258P61166 79 aa10.97□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Cyyr1Q8VIH7 165 aa10.97□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Q9D8Q6 235 aa10.97□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Dscaml1Q4VA61 2053 aa10.97□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Ighv1-63A0A075B5X2 117 aa10.97□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Nupr2Q497P3 102 aa10.97□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Trbv16A0A0B4J1H3 115 aa10.96□□□□□ -0.65
Shroom3-202ENSMUST00000113054 ScxQ64124 207 aa10.96□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Mrpl52Q9D0Y8 121 aa10.96□□□□□ -0.65
Shroom3-202ENSMUST00000113054 Ighv1-85A0A075B5Y6 117 aa10.96□□□□□ -0.66
Shroom3-202ENSMUST00000113054 Igkv1-110A0A0B4J1I0 119 aa10.95□□□□□ -0.66
Shroom3-202ENSMUST00000113054 Tfpi2O35536 230 aa10.95□□□□□ -0.66
Shroom3-202ENSMUST00000113054 A0A286YCN5 57 aa10.95□□□□□ -0.66
Shroom3-202ENSMUST00000113054 P01674 108 aa10.95□□□□□ -0.66
Shroom3-202ENSMUST00000113054 Q9D131 166 aa10.95□□□□□ -0.66
Shroom3-202ENSMUST00000113054 NpyP57774 97 aa10.94□□□□□ -0.66
Shroom3-202ENSMUST00000113054 E130116L18RikQ8BMV6 101 aa10.94□□□□□ -0.66
Shroom3-202ENSMUST00000113054 SptssbQ925E8 76 aa10.94□□□□□ -0.66
Shroom3-202ENSMUST00000113054 CrygcQ61597 174 aa10.94□□□□□ -0.66
Shroom3-202ENSMUST00000113054 Trav11A0A0B4J1J9 114 aa10.94□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 73.3 ms