RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Zfp951A0A087WRH0 451 aa7.76□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Igkv4-68A0A0B4J1I7 117 aa7.76□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Defa7P50705 93 aa7.76□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Atp5g3P56384 141 aa7.76□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Atp5g1Q9CR84 136 aa7.76□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Ighv2-3A0A075B696 115 aa7.76□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 4930470P17RikQ9D542 155 aa7.76□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Wisp2Q9Z0G4 251 aa7.76□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Ighv1-85A0A075B5Y6 117 aa7.76□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Ighv3-3A0A0A6YWL2 116 aa7.76□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Defa25Q5G864 92 aa7.76□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Cspg4Q8VHY0 2327 aa7.76□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Crlf1Q9JM58 425 aa7.76□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Arhgef17Q80U35 2057 aa7.75□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Samd13D3YUG0 102 aa7.75□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 P01747 120 aa7.75□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Psmb8P28063 276 aa7.75□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Scgb1b2O35176 93 aa7.75□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Ppp1r32Q148A4 427 aa7.75□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Fgfbp3Q1HCM0 245 aa7.75□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Inafm2A0A1L1STD6 152 aa7.75□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Gm5629P06327 117 aa7.75□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 MrapQ9D159 127 aa7.75□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Ndufa3Q9CQ91 84 aa7.74□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 E130218I03RikA0A0U1RNU5 63 aa7.74□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Defa4P28311 92 aa7.74□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Gm42674D3YUT9 64 aa7.74□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Cox7a1P56392 80 aa7.74□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Defb47Q30KN1 79 aa7.73□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Arid1bE9Q4N7 2244 aa7.73□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 P01745 121 aa7.73□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Acyp1P56376 99 aa7.73□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Spg11Q3UHA3 2430 aa7.73□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Igkv4-61A0A0G2JH00 117 aa7.73□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 PrcdQ00LT2 53 aa7.73□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Spink12Q9D256 87 aa7.73□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 PtprbB2RU80 1998 aa7.73□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 NbasE9Q411 2356 aa7.73□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Zfyve26Q5DU37 2529 aa7.73□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Ighv1-66A0A075B5X5 117 aa7.72□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 BB014433Q8C5R5 389 aa7.72□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 PpdpfQ9CR37 115 aa7.72□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Wnk1P83741 2377 aa7.72□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Trav3-4A0A075B654 114 aa7.72□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Lgals4Q8K419 326 aa7.72□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Col6a4A2AX52 2309 aa7.72□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 F5O88783 2183 aa7.72□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Dopey1Q8BL99 2399 aa7.72□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Tm2d2Q8R0I4 213 aa7.71□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Defb29Q8BGW9 78 aa7.71□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Ighv2-6-8A0A0A6YWY9 116 aa7.71□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 P84751 237 aa7.71□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Nav3Q80TN7 2359 aa7.7□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 TshbP12656 138 aa7.7□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Ly6gP35461 111 aa7.7□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Fgf6P21658 208 aa7.7□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Col5a1O88207 1838 aa7.7□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Igkv4-59A0A0B4J1I8 117 aa7.7□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Dph3Q8K0W9 82 aa7.7□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Ighv1-61P01749 117 aa7.7□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Igkv6-13A0A0G2JGY3 119 aa7.69□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 ColqO35348 457 aa7.69□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Pcnx2Q5DU28 2122 aa7.69□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Gm44965A0A0N4SVR3 59 aa7.69□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Sigmar1O55242 223 aa7.69□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 PkigO70139 76 aa7.69□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Edn2P22389 175 aa7.69□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Zc2hc1bQ9D534 172 aa7.69□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 BC107364E9Q5A2 140 aa7.69□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 MsmbO08540 113 aa7.69□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Trav14d-3-dv8A0A075B619 120 aa7.69□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 FcorP0DJI6 106 aa7.69□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 PlaurP35456 327 aa7.69□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Rbmy1bQ60990 380 aa7.69□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Ighv1-63A0A075B5X2 117 aa7.68□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Klk11Q9QYN3 276 aa7.68□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Trav13n-1A0A0G2JEU8 110 aa7.68□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Defa28D3Z1V9 94 aa7.68□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Prp2P05143 317 aa7.68□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Triap1Q9D8Z2 76 aa7.68□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Ighv13-2A0A0A6YWN3 119 aa7.68□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 P18527 97 aa7.68□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Trav13d-1A0A075B606 110 aa7.67□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Fhl2O70433 279 aa7.67□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 PtprqP0C5E4 2300 aa7.67□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Igkv4-54A0A0G2JES9 117 aa7.67□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Tanc2A2A690 1994 aa7.67□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Igkv4-72A0A0B4J1I4 117 aa7.67□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Trav13d-4A0A0G2JFX3 110 aa7.67□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Timm17bQ9Z0V7 172 aa7.67□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 DscamQ9ERC8 2013 aa7.67□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 A0A286YE02 88 aa7.66□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 AngP21570 145 aa7.66□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Polr2kQ63871 58 aa7.66□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Gm26566Q8CAC1 153 aa7.66□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Gm8439G3UWA7 96 aa7.66□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Chchd7Q8K2Q5 85 aa7.66□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Chd8Q09XV5 2582 aaKnown RBP7.66□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Gm10542F6XDR3 90 aa7.66□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 C1qcQ02105 246 aa7.66□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms