RNA–Protein interactions for RNA: ENSMUST00000035911.4

Rc3h1-201, Transcript of Roquin-1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Rc3h1, Length 3,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-201ENSMUST00000035911 Defa-rs2P17534 91 aa4.27□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Hist1h4aP62806 103 aaKnown RBP4.27□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Q4KKZ1 196 aa4.27□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 9430015G10RikA2ASP7 199 aa4.27□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Hbb-b2P02089 147 aa4.27□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Lynx1P0DP60 116 aa4.27□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 GhrhP16043 103 aa4.27□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Rpl18aP62717 176 aaKnown RBP4.27□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Fam19a4Q7TPG5 135 aa4.27□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Ndufb4Q9CQC7 129 aa4.27□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Naa38Q9D2U5 125 aa4.27□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 AspmQ8CJ27 3122 aa4.27□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Lrrc37aB1AWG4 3215 aa4.27□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Trav4-3A0A0B4J1K1 110 aa4.26□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Ly6lH3BJG9 140 aa4.26□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 7530416G11RikJ3QJX6 159 aa4.26□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Cxcl13O55038 109 aa4.26□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 P01729 129 aa4.26□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Serp2Q6TAW2 65 aa4.26□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 AI854703Q8BIN3 203 aa4.26□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 SpenQ62504 3644 aaKnown RBP4.26□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Sh2d1aO88890 126 aa4.26□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Klk1b4P00757 256 aa4.26□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 AngP21570 145 aa4.26□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 BC025920Q3US60 128 aa4.26□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Igkv6-13A0A0G2JGY3 119 aa4.26□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Gm10337F7DEP7 55 aa4.26□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Vpreb1P13372 142 aa4.26□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 CdsnQ7TPC1 561 aa4.26□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 A730015C16RikQ8C992 119 aa4.26□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Gm15217A2CG07 155 aa4.25□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Ly6gP35461 111 aa4.25□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Zfand3Q497H0 227 aa4.25□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 H2al1aQ5M8Q2 105 aa4.25□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Ang2Q64438 145 aa4.25□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Taf15Q8BQ46 557 aaKnown RBP4.25□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Ighv1-81A0A075B5Y4 117 aa4.25□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Trav13d-1A0A075B606 110 aa4.25□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Ighv1-5A0A0A6YWG2 117 aa4.25□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 1700056E22RikF7CNM6 234 aa4.25□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 P01747 120 aa4.25□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 1500011B03RikQ3TTH7 73 aa4.25□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 B230307C23RikQ8BLB2 64 aa4.25□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 A130051J06RikQ8CAU1 227 aa4.25□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Wfdc15bQ9JHY4 80 aa4.25□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 AcacaQ5SWU9 2345 aa4.25□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Cd59aO55186 123 aa4.25□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 CntfrO88507 372 aa4.25□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 SelenowP63300 88 aa4.25□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Smim26Q3V460 107 aa4.25□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Dpm3Q9D1Q4 92 aa4.25□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Rev3lQ61493 3122 aa4.24□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 OdaphJ3QNT8 126 aa4.24□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 P06328 117 aa4.24□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Cops9Q3U898 57 aa4.24□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Minos1Q7TNS2 76 aa4.24□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Bles03Q8VD62 251 aa4.24□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Ly6hQ9WUC3 139 aa4.24□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Med13lQ6JPI3 2207 aa4.24□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Igkv4-91A0A075B5L2 119 aa4.24□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Trbv30A0A0B4J1P1 111 aa4.24□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 1700084M14RikB1AT01 78 aa4.24□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 E030018B13RikJ3QMS9 113 aa4.24□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Pip4p1Q3TWL2 284 aa4.24□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Ndufa11Q9D8B4 141 aa4.24□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Kmt2bO08550 2713 aa4.24□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Map1aQ9QYR6 2776 aa4.24□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Ighv8-11A0A075B5X4 119 aa4.23□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Gm17472A0A075B683 117 aa4.23□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 P18532 116 aa4.23□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 CrygeQ03740 174 aa4.23□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Ang4Q3TMQ6 144 aa4.23□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Psmb11Q8BG41 302 aa4.23□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Cxcl14Q9WUQ5 99 aa4.23□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Timm17bQ9Z0V7 172 aa4.23□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Akap6E9Q9K8 2307 aa4.23□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Ighv1-75A0A075B5Y2 117 aa4.23□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Igkv4-59A0A0B4J1I8 117 aa4.23□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 LoxP28301 411 aa4.23□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Spint3Q3UW09 88 aa4.23□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Csmd1Q923L3 3564 aa4.23□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Tcte2E9PY37 120 aa4.23□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 PemtQ61907 199 aa4.23□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Gphb5Q812B2 130 aa4.23□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Gm7173A0A0G2JEB6 3132 aa4.22□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Ighv1-85A0A075B5Y6 117 aa4.22□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Ighv1-82A0A0G2JEU7 117 aa4.22□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Gm20499D3Z4G5 72 aa4.22□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 P06329 120 aa4.22□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Eif4ebp3Q80VV3 101 aa4.22□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Ifitm1Q9D103 106 aa4.22□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 4930564D02RikQ9D4S4 103 aa4.22□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Ighv1-66A0A075B5X5 117 aa4.22□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Ighv13-2A0A0A6YWN3 119 aa4.22□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Lst1O08843 95 aa4.22□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Atp6v0e1Q9CQD8 81 aa4.22□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Sptan1P16546 2472 aaKnown RBP4.22□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Ighv3-3A0A0A6YWL2 116 aa4.22□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Ighv1-12A0A0A6YXJ9 117 aa4.22□□□□□ -1.73
Rc3h1-201ENSMUST00000035911 Spink6Q8BT20 105 aa4.22□□□□□ -1.73
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms