RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Ighv1-85A0A075B5Y6 117 aa7.74□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Zfand3Q497H0 227 aa7.74□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Serp2Q6TAW2 65 aa7.74□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Eml6Q5SQM0 1958 aa7.74□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Crybg1A0A0G2JG52 2065 aa7.74□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Fam222aQ6PGH4 453 aa7.74□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Col4a6B1AVK5 1691 aa7.73□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Gm37988J3QM41 62 aa7.73□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Ighv2-6-8A0A0A6YWY9 116 aa7.73□□□□□ -1.17
Ubr1-201ENSMUST00000028728 CenpeQ6RT24 2474 aaKnown RBP7.73□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Tcl1b3P56842 122 aa7.73□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Trav13n-1A0A0G2JEU8 110 aa7.73□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Smrp1Q2MH31 260 aa7.73□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Gm12353A2AGJ4 60 aa7.73□□□□□ -1.17
Ubr1-201ENSMUST00000028728 P06328 117 aa7.73□□□□□ -1.17
Ubr1-201ENSMUST00000028728 P18527 97 aa7.73□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Q9D8Q6 235 aa7.73□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Ndufs7Q9DC70 224 aa7.73□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Edn3P48299 214 aa7.72□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Wfdc15bQ9JHY4 80 aa7.72□□□□□ -1.17
Ubr1-201ENSMUST00000028728 9130230L23RikQ8CC80 163 aa7.72□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Rai1Q61818 1889 aa7.72□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Q9CX25 107 aa7.72□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Trav9n-2A0A0G2JDP3 113 aa7.72□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Ighv1-82A0A0G2JEU7 117 aa7.72□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Pla2g2eQ9QUL3 142 aa7.72□□□□□ -1.17
Ubr1-201ENSMUST00000028728 A830031A19RikQ8BNT5 113 aa7.71□□□□□ -1.17
Ubr1-201ENSMUST00000028728 B430305J03RikQ8BQQ8 176 aa7.71□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Nop10Q9CQS2 64 aa7.71□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Trav13d-1A0A075B606 110 aa7.71□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Igkv8-34A0A0G2JDU0 121 aa7.71□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Trav9-2A0A075B647 113 aa7.71□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Trav9-4A0A0B4J1K2 113 aa7.71□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Cd27P41272 250 aa7.71□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Prop1P97458 223 aa7.71□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Spata25Q9DA57 226 aa7.71□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Rpl18aP62717 176 aaKnown RBP7.7□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Wipf1Q8K1I7 493 aa7.7□□□□□ -1.18
Ubr1-201ENSMUST00000028728 C1qcQ02105 246 aa7.7□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Abca4O35600 2310 aa7.7□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Gm10775Q3V290 127 aa7.7□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Trav9d-3A0A075B695 113 aa7.7□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Gm19935A0A1B0GSF9 52 aa7.7□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Igkv4-74A0A0B4J1I3 119 aa7.7□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Gm10337F7DEP7 55 aa7.7□□□□□ -1.18
Ubr1-201ENSMUST00000028728 FcorP0DJI6 106 aa7.69□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Psmb8P28063 276 aa7.69□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Igkv1-35A0A0G2JDE5 120 aa7.69□□□□□ -1.18
Ubr1-201ENSMUST00000028728 AvpP35455 168 aa7.69□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Gm12689Q8BQU9 117 aa7.69□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Gm10518F6UQQ9 182 aa7.68□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Fgfbp3Q1HCM0 245 aa7.68□□□□□ -1.18
Ubr1-201ENSMUST00000028728 HelzQ6DFV5 1964 aaKnown RBP7.68□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Gm10553J3QPF1 123 aa7.68□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Ube2d1P61080 147 aaKnown RBP7.67□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Dscaml1Q4VA61 2053 aa7.67□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Gm4861Q8C5A4 106 aa7.67□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Ucn2Q99ML8 113 aa7.67□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Gm10251J3QPM5 127 aa7.67□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Arhgef17Q80U35 2057 aa7.67□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Defb26Q30KN7 186 aa7.67□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Igkv2-109A0A075B5K6 120 aa7.67□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Gm15557A6PWY0 234 aa7.67□□□□□ -1.18
Ubr1-201ENSMUST00000028728 A130051J06RikQ8CAU1 227 aa7.67□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Tm2d2Q8R0I4 213 aa7.67□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Gm17472A0A075B683 117 aa7.66□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Sdk1Q3UH53 2193 aa7.66□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Ighv2-7A0A075B5Q8 116 aa7.66□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Tet2Q4JK59 1912 aaKnown RBP7.66□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Rnf114Q9ET26 229 aa7.66□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Ncor1Q60974 2453 aa7.66□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Pcnx2Q5DU28 2122 aa7.66□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Tcf20Q9EPQ8 1987 aa7.66□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Ube2d4D3YUH6 135 aa7.66□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Ube2d3P61079 147 aa7.66□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Ube2d2P62838 147 aa7.66□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Ighv1-66A0A075B5X5 117 aa7.65□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Igkv1-122A0A140T8M9 119 aa7.65□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Trav13n-2A0A0G2JF93 110 aa7.65□□□□□ -1.18
Ubr1-201ENSMUST00000028728 Rpl39lQ9CQD0 51 aa7.65□□□□□ -1.18
Ubr1-201ENSMUST00000028728 1810032O08RikE9PZV8 113 aa7.65□□□□□ -1.19
Ubr1-201ENSMUST00000028728 Pcnx3Q8VI59 2028 aa7.65□□□□□ -1.19
Ubr1-201ENSMUST00000028728 Gm10542F6XDR3 90 aa7.65□□□□□ -1.19
Ubr1-201ENSMUST00000028728 P01643 108 aa7.65□□□□□ -1.19
Ubr1-201ENSMUST00000028728 Gm10577Q3UDV9 132 aa7.65□□□□□ -1.19
Ubr1-201ENSMUST00000028728 Tanc2A2A690 1994 aa7.64□□□□□ -1.19
Ubr1-201ENSMUST00000028728 Gm21994F6T2D2 329 aa7.64□□□□□ -1.19
Ubr1-201ENSMUST00000028728 Nsun4C4P6S0 806 aaKnown RBP7.64□□□□□ -1.19
Ubr1-201ENSMUST00000028728 Cox7a1P56392 80 aa7.64□□□□□ -1.19
Ubr1-201ENSMUST00000028728 Polr2kQ63871 58 aa7.64□□□□□ -1.19
Ubr1-201ENSMUST00000028728 Prp2P05143 317 aa7.64□□□□□ -1.19
Ubr1-201ENSMUST00000028728 Nav2E9Q842 2432 aa7.64□□□□□ -1.19
Ubr1-201ENSMUST00000028728 Ighv3-3A0A0A6YWL2 116 aa7.64□□□□□ -1.19
Ubr1-201ENSMUST00000028728 Gm6899Q3USS0 134 aa7.64□□□□□ -1.19
Ubr1-201ENSMUST00000028728 Trav13d-4A0A0G2JFX3 110 aa7.63□□□□□ -1.19
Ubr1-201ENSMUST00000028728 Gm10322F7D7I4 111 aa7.63□□□□□ -1.19
Ubr1-201ENSMUST00000028728 BlcapP62951 87 aa7.63□□□□□ -1.19
Ubr1-201ENSMUST00000028728 Ly6hQ9WUC3 139 aa7.63□□□□□ -1.19
Ubr1-201ENSMUST00000028728 Klk12B2RVZ0 247 aa7.63□□□□□ -1.19
Ubr1-201ENSMUST00000028728 AgrnA2ASQ1 1950 aa7.63□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 98.2 ms