RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 SpinklQ8CEK3 90 aa9.15□□□□□ -0.94
Trim23-201ENSMUST00000022225 Pla2g2dQ9WVF6 144 aa9.15□□□□□ -0.94
Trim23-201ENSMUST00000022225 Ighv1-85A0A075B5Y6 117 aa9.15□□□□□ -0.95
Trim23-201ENSMUST00000022225 Defa4P28311 92 aa9.15□□□□□ -0.95
Trim23-201ENSMUST00000022225 Rps28P62858 69 aaKnown RBP9.15□□□□□ -0.95
Trim23-201ENSMUST00000022225 Pip4p1Q3TWL2 284 aa9.15□□□□□ -0.95
Trim23-201ENSMUST00000022225 Col6a6Q8C6K9 2265 aa9.15□□□□□ -0.95
Trim23-201ENSMUST00000022225 Edn2P22389 175 aa9.14□□□□□ -0.95
Trim23-201ENSMUST00000022225 Fam19a4Q7TPG5 135 aa9.14□□□□□ -0.95
Trim23-201ENSMUST00000022225 Timm17bQ9Z0V7 172 aa9.14□□□□□ -0.95
Trim23-201ENSMUST00000022225 Gm10521E9PZK0 135 aa9.14□□□□□ -0.95
Trim23-201ENSMUST00000022225 Gm4861Q8C5A4 106 aa9.14□□□□□ -0.95
Trim23-201ENSMUST00000022225 Klk11Q9QYN3 276 aa9.14□□□□□ -0.95
Trim23-201ENSMUST00000022225 Cnot1Q6ZQ08 2375 aaKnown RBP9.13□□□□□ -0.95
Trim23-201ENSMUST00000022225 Smg1Q8BKX6 3658 aaKnown RBP9.13□□□□□ -0.95
Trim23-201ENSMUST00000022225 Gatd1Q8BFQ8 220 aa9.13□□□□□ -0.95
Trim23-201ENSMUST00000022225 Fam208bQ5DTT3 2382 aa9.13□□□□□ -0.95
Trim23-201ENSMUST00000022225 Gm20726G3UX18 150 aa9.13□□□□□ -0.95
Trim23-201ENSMUST00000022225 Trbv16A0A0B4J1H3 115 aa9.12□□□□□ -0.95
Trim23-201ENSMUST00000022225 Gm17732E9Q5I2 61 aa9.12□□□□□ -0.95
Trim23-201ENSMUST00000022225 Pglyrp1O88593 182 aa9.12□□□□□ -0.95
Trim23-201ENSMUST00000022225 A830031A19RikQ8BNT5 113 aa9.12□□□□□ -0.95
Trim23-201ENSMUST00000022225 Igf1P05017 153 aa9.12□□□□□ -0.95
Trim23-201ENSMUST00000022225 Hist1h4aP62806 103 aaKnown RBP9.12□□□□□ -0.95
Trim23-201ENSMUST00000022225 D130052B06RikQ3UW13 202 aa9.12□□□□□ -0.95
Trim23-201ENSMUST00000022225 Prr3Q811B5 190 aaKnown RBP9.12□□□□□ -0.95
Trim23-201ENSMUST00000022225 Rpl11Q9CXW4 178 aaKnown RBP9.12□□□□□ -0.95
Trim23-201ENSMUST00000022225 3110070M22RikQ9DAQ7 118 aa9.12□□□□□ -0.95
Trim23-201ENSMUST00000022225 P04219 140 aa9.12□□□□□ -0.95
Trim23-201ENSMUST00000022225 Ighv2-6-8A0A0A6YWY9 116 aa9.11□□□□□ -0.95
Trim23-201ENSMUST00000022225 Gm20499D3Z4G5 72 aa9.11□□□□□ -0.95
Trim23-201ENSMUST00000022225 7530416G11RikJ3QJX6 159 aa9.11□□□□□ -0.95
Trim23-201ENSMUST00000022225 LhbO09108 141 aa9.11□□□□□ -0.95
Trim23-201ENSMUST00000022225 4930564D02RikQ9D4S4 103 aa9.11□□□□□ -0.95
Trim23-201ENSMUST00000022225 Bdp1Q571C7 2467 aa9.11□□□□□ -0.95
Trim23-201ENSMUST00000022225 Gm20730A0A075B5J6 119 aa9.11□□□□□ -0.95
Trim23-201ENSMUST00000022225 Trav4-3A0A0B4J1K1 110 aa9.11□□□□□ -0.95
Trim23-201ENSMUST00000022225 Krtap27-1E9PX37 202 aa9.11□□□□□ -0.95
Trim23-201ENSMUST00000022225 4930518I15RikQ3V2W7 57 aa9.11□□□□□ -0.95
Trim23-201ENSMUST00000022225 B230104I21RikQ3USW4 141 aa9.09□□□□□ -0.95
Trim23-201ENSMUST00000022225 DspE9Q557 2883 aaKnown RBP9.09□□□□□ -0.95
Trim23-201ENSMUST00000022225 Ubtd1Q91WB7 227 aa9.09□□□□□ -0.95
Trim23-201ENSMUST00000022225 Ifitm1Q9D103 106 aa9.09□□□□□ -0.95
Trim23-201ENSMUST00000022225 Fam216aQ9DB54 251 aa9.09□□□□□ -0.95
Trim23-201ENSMUST00000022225 Ighv3-8A0A075B5T0 131 aa9.09□□□□□ -0.95
Trim23-201ENSMUST00000022225 P01750 117 aa9.09□□□□□ -0.95
Trim23-201ENSMUST00000022225 Spint3Q3UW09 88 aa9.09□□□□□ -0.95
Trim23-201ENSMUST00000022225 Gm29666A0A087WQ99 126 aa9.08□□□□□ -0.96
Trim23-201ENSMUST00000022225 Tmem86bQ497J1 226 aa9.08□□□□□ -0.96
Trim23-201ENSMUST00000022225 Spink6Q8BT20 105 aa9.08□□□□□ -0.96
Trim23-201ENSMUST00000022225 Ndufa11Q9D8B4 141 aa9.08□□□□□ -0.96
Trim23-201ENSMUST00000022225 P06329 120 aa9.08□□□□□ -0.96
Trim23-201ENSMUST00000022225 Znf740Q6NZQ6 180 aa9.08□□□□□ -0.96
Trim23-201ENSMUST00000022225 Cxcl14Q9WUQ5 99 aa9.08□□□□□ -0.96
Trim23-201ENSMUST00000022225 Gm17472A0A075B683 117 aa9.08□□□□□ -0.96
Trim23-201ENSMUST00000022225 Defb30Q30KN4 75 aa9.08□□□□□ -0.96
Trim23-201ENSMUST00000022225 Ndufb4Q9CQC7 129 aa9.08□□□□□ -0.96
Trim23-201ENSMUST00000022225 Fgf23Q9EPC2 251 aa9.08□□□□□ -0.96
Trim23-201ENSMUST00000022225 Map1bP14873 2464 aaKnown RBP9.07□□□□□ -0.96
Trim23-201ENSMUST00000022225 Phpt1Q9DAK9 124 aa9.07□□□□□ -0.96
Trim23-201ENSMUST00000022225 Trav11A0A0B4J1J9 114 aa9.06□□□□□ -0.96
Trim23-201ENSMUST00000022225 OdaphJ3QNT8 126 aa9.06□□□□□ -0.96
Trim23-201ENSMUST00000022225 CdsnQ7TPC1 561 aa9.06□□□□□ -0.96
Trim23-201ENSMUST00000022225 Ly6hQ9WUC3 139 aa9.06□□□□□ -0.96
Trim23-201ENSMUST00000022225 Ighv2-3A0A075B696 115 aa9.06□□□□□ -0.96
Trim23-201ENSMUST00000022225 Gm9747Q810H1 104 aa9.06□□□□□ -0.96
Trim23-201ENSMUST00000022225 Ighv1-50A0A075B5W1 117 aa9.05□□□□□ -0.96
Trim23-201ENSMUST00000022225 Gm11020F6ZGD5 61 aa9.05□□□□□ -0.96
Trim23-201ENSMUST00000022225 Dand5Q76LW6 185 aa9.05□□□□□ -0.96
Trim23-201ENSMUST00000022225 5730596B20RikQ8BQ08 205 aa9.05□□□□□ -0.96
Trim23-201ENSMUST00000022225 Trav13d-1A0A075B606 110 aa9.05□□□□□ -0.96
Trim23-201ENSMUST00000022225 Samd13D3YUG0 102 aa9.05□□□□□ -0.96
Trim23-201ENSMUST00000022225 AngP21570 145 aa9.05□□□□□ -0.96
Trim23-201ENSMUST00000022225 4930519P11RikQ9CUJ8 166 aa9.05□□□□□ -0.96
Trim23-201ENSMUST00000022225 Cep250Q60952 2414 aa9.04□□□□□ -0.96
Trim23-201ENSMUST00000022225 Igkv4-69A0A0B4J1I6 116 aa9.04□□□□□ -0.96
Trim23-201ENSMUST00000022225 Dopey2Q3UHQ6 2295 aa9.03□□□□□ -0.96
Trim23-201ENSMUST00000022225 Igkv4-62A0A0G2JDW9 117 aa9.03□□□□□ -0.96
Trim23-201ENSMUST00000022225 Mrps21P58059 87 aa9.03□□□□□ -0.96
Trim23-201ENSMUST00000022225 Tmem258P61166 79 aa9.03□□□□□ -0.96
Trim23-201ENSMUST00000022225 Prelid3aQ8VE85 172 aa9.03□□□□□ -0.96
Trim23-201ENSMUST00000022225 Gvin1Q80SU7 2427 aa9.03□□□□□ -0.96
Trim23-201ENSMUST00000022225 Rpl18aP62717 176 aaKnown RBP9.03□□□□□ -0.96
Trim23-201ENSMUST00000022225 Xcl1P47993 114 aa9.02□□□□□ -0.96
Trim23-201ENSMUST00000022225 1700010B08RikQ9DAI7 102 aa9.02□□□□□ -0.96
Trim23-201ENSMUST00000022225 FshbQ60687 130 aa9.02□□□□□ -0.97
Trim23-201ENSMUST00000022225 9430015G10RikA2ASP7 199 aa9.02□□□□□ -0.97
Trim23-201ENSMUST00000022225 Ighv1-61P01749 117 aa9.02□□□□□ -0.97
Trim23-201ENSMUST00000022225 HampQ9EQ21 83 aa9.02□□□□□ -0.97
Trim23-201ENSMUST00000022225 Edn3P48299 214 aa9.01□□□□□ -0.97
Trim23-201ENSMUST00000022225 Dopey1Q8BL99 2399 aa9.01□□□□□ -0.97
Trim23-201ENSMUST00000022225 Cacna1hO88427 2365 aa9.01□□□□□ -0.97
Trim23-201ENSMUST00000022225 Gm19935A0A1B0GSF9 52 aa9.01□□□□□ -0.97
Trim23-201ENSMUST00000022225 Sh2d1aO88890 126 aa9.01□□□□□ -0.97
Trim23-201ENSMUST00000022225 H2al1aQ5M8Q2 105 aa9.01□□□□□ -0.97
Trim23-201ENSMUST00000022225 Ighv1-63A0A075B5X2 117 aa9.01□□□□□ -0.97
Trim23-201ENSMUST00000022225 Ighv1-72P01751 139 aa9.01□□□□□ -0.97
Trim23-201ENSMUST00000022225 E130116L18RikQ8BMV6 101 aa9.01□□□□□ -0.97
Trim23-201ENSMUST00000022225 Dkk4Q8VEJ3 221 aa9.01□□□□□ -0.97
Trim23-201ENSMUST00000022225 Sostdc1Q9CQN4 206 aa9.01□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 128.7 ms