RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Ighv2-7A0A075B5Q8 116 aa7.02□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Obsl1D3YYU8 1804 aaKnown RBP7.02□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Gm20726G3UX18 150 aa7.01□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Gm17577J3QNF7 156 aa7.01□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Q9CX25 107 aa7.01□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Cspg4Q8VHY0 2327 aa7.01□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Ube2d4D3YUH6 135 aa7.01□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Ang3P97802 145 aa7.01□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 CrygcQ61597 174 aa7.01□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Itgb4A2A863 1818 aa7.01□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Ndufb1P0DN34 57 aa7.01□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Gm17472A0A075B683 117 aa7□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Gm28539A0A087WSL9 92 aa7□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 BlcapP62951 87 aa7□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Rpl39P62892 51 aa7□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Ighv1-85A0A075B5Y6 117 aa7□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Ighv2-6-8A0A0A6YWY9 116 aa7□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 9430015G10RikA2ASP7 199 aa7□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Tfpi2O35536 230 aa7□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Vpreb1P13372 142 aa7□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Heatr5aQ5PRF0 2038 aa7□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 FancmQ8BGE5 2021 aa7□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Igf1P05017 153 aa7□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Gm17324Q8C6J8 137 aa7□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Crip1P63254 77 aa6.99□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Bcorl1A2AQH4 1781 aa6.99□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 1810032O08RikE9PZV8 113 aa6.99□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Gm9958Q8C9U4 106 aa6.99□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Plxna2P70207 1894 aa6.99□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Ighv1-5A0A0A6YWG2 117 aa6.99□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 P01674 108 aa6.99□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 CtrlQ9ER05 264 aa6.99□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Greb1Q3UHK3 1954 aa6.99□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Ncoa6Q9JL19 2067 aa6.99□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Gm3618D3Z4P5 127 aa6.98□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Ighv10-1A0A0B4J1J6 119 aa6.98□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 CstadQ9D245 104 aa6.98□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 OdaphJ3QNT8 126 aa6.98□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Rnase1P00683 149 aa6.98□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 CrygdP04342 174 aa6.98□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Reg3bP35230 175 aa6.98□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Ighv1-82A0A0G2JEU7 117 aa6.97□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Trav13n-1A0A0G2JEU8 110 aa6.97□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 4930470P17RikQ9D542 155 aa6.97□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Atg2aQ6P4T0 1914 aa6.97□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Trav13-2A0A075B649 110 aa6.97□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Trav13d-4A0A0G2JFX3 110 aa6.97□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Igkv1-88A0A140T8N1 120 aa6.97□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Tcl1b5P56845 121 aa6.97□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Atox1O08997 68 aaKnown RBP6.97□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 P84751 237 aa6.97□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Ufsp1Q9CZP0 217 aa6.97□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Tnfrsf23Q9ER63 176 aa6.97□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Sprr3O09116 238 aa6.97□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 P06328 117 aa6.97□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Nckap5E9QAE1 1909 aa6.96□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Gm42674D3YUT9 64 aa6.96□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Gm6034E9Q101 117 aa6.96□□□□□ -1.29
Ccdc47-201ENSMUST00000002043 Igkv2-109A0A075B5K6 120 aa6.96□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Iglv1A0A075B663 117 aa6.96□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Rpl18aP62717 176 aaKnown RBP6.96□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 9530003J23RikQ8BM26 151 aa6.96□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Trip12G5E870 2025 aaKnown RBP6.96□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Gm5629P06327 117 aa6.95□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Chchd7Q8K2Q5 85 aa6.95□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Cox8cA6H666 72 aa6.95□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Klk12B2RVZ0 247 aa6.95□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Psmb8P28063 276 aa6.95□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 PpdpfQ9CR37 115 aa6.95□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 F5O88783 2183 aa6.95□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Trav9n-4A0A075B631 113 aa6.95□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Pip4p1Q3TWL2 284 aa6.95□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Med13lQ6JPI3 2207 aa6.94□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Gm17359A0A0G2JEB7 487 aa6.94□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Map6d1Q14BB9 191 aa6.94□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Wfdc15bQ9JHY4 80 aa6.94□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Pla2g2dQ9WVF6 144 aa6.94□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Rpl39lQ9CQD0 51 aa6.94□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Gm17521F6QAC8 156 aa6.94□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Spink4O35679 86 aa6.94□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Trbv13-1A0A0B4J1P8 112 aa6.94□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Defb13Q8R2I4 64 aa6.94□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Triap1Q9D8Z2 76 aa6.94□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Igkv8-21A0A140T8P7 120 aa6.93□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Cd27P41272 250 aa6.93□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Rif1Q6PR54 2419 aaKnown RBP6.93□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Tcte2E9PY37 120 aa6.93□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Pla2g2aP31482 146 aa6.93□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Gm10577Q3UDV9 132 aa6.93□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Gm10647E9Q8X0 124 aa6.93□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 AvpP35455 168 aa6.93□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Cfc1P97766 202 aa6.93□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Fgf23Q9EPC2 251 aa6.93□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Sorl1O88307 2215 aaKnown RBP6.93□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Gm10322F7D7I4 111 aa6.93□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Ebi3O35228 228 aa6.93□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Serp2Q6TAW2 65 aa6.93□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 MyofQ69ZN7 2048 aaKnown RBP6.92□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Trav13n-2A0A0G2JF93 110 aa6.92□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 P01658 132 aa6.92□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms