RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 Ndufb4Q9CQC7 129 aa13.9□□□□□ -0.18
Smarcc1-207ENSMUST00000199896 Trav4n-4A0A075B615 110 aa13.9□□□□□ -0.18
Smarcc1-207ENSMUST00000199896 Cd300eQ8K249 196 aa13.9□□□□□ -0.18
Smarcc1-207ENSMUST00000199896 A230072I06RikQ3UUJ8 172 aa13.9□□□□□ -0.18
Smarcc1-207ENSMUST00000199896 Pglyrp1O88593 182 aa13.9□□□□□ -0.18
Smarcc1-207ENSMUST00000199896 Tnrc6aQ3UHK8 1896 aaKnown RBP13.89□□□□□ -0.19
Smarcc1-207ENSMUST00000199896 Arhgef17Q80U35 2057 aa13.89□□□□□ -0.19
Smarcc1-207ENSMUST00000199896 Zfp951A0A087WRH0 451 aa13.89□□□□□ -0.19
Smarcc1-207ENSMUST00000199896 P04943 107 aa13.88□□□□□ -0.19
Smarcc1-207ENSMUST00000199896 Lce6aD3YV94 81 aa13.88□□□□□ -0.19
Smarcc1-207ENSMUST00000199896 Gm10638F6QEG2 257 aa13.88□□□□□ -0.19
Smarcc1-207ENSMUST00000199896 PemtQ61907 199 aa13.87□□□□□ -0.19
Smarcc1-207ENSMUST00000199896 1810032O08RikE9PZV8 113 aa13.87□□□□□ -0.19
Smarcc1-207ENSMUST00000199896 OtoglF7A4A7 2325 aa13.86□□□□□ -0.19
Smarcc1-207ENSMUST00000199896 Trav12-3A0A075B648 115 aa13.86□□□□□ -0.19
Smarcc1-207ENSMUST00000199896 Igkv1-122A0A140T8M9 119 aa13.86□□□□□ -0.19
Smarcc1-207ENSMUST00000199896 Rnase1P00683 149 aa13.86□□□□□ -0.19
Smarcc1-207ENSMUST00000199896 Ang4Q3TMQ6 144 aa13.85□□□□□ -0.19
Smarcc1-207ENSMUST00000199896 1500011B03RikQ3TTH7 73 aa13.85□□□□□ -0.19
Smarcc1-207ENSMUST00000199896 Defa27F2Z403 93 aa13.85□□□□□ -0.19
Smarcc1-207ENSMUST00000199896 Gm17455G3UW87 128 aa13.85□□□□□ -0.19
Smarcc1-207ENSMUST00000199896 Igkv4-58A0A0G2JGI6 119 aa13.85□□□□□ -0.19
Smarcc1-207ENSMUST00000199896 SelenowP63300 88 aa13.85□□□□□ -0.19
Smarcc1-207ENSMUST00000199896 Crip1P63254 77 aa13.84□□□□□ -0.19
Smarcc1-207ENSMUST00000199896 Arhgap21Q6DFV3 1944 aa13.84□□□□□ -0.19
Smarcc1-207ENSMUST00000199896 Ang3P97802 145 aa13.84□□□□□ -0.19
Smarcc1-207ENSMUST00000199896 Tm2d2Q8R0I4 213 aa13.83□□□□□ -0.19
Smarcc1-207ENSMUST00000199896 Ighv1-53A0A075B5W3 117 aa13.83□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 P01748 117 aa13.83□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 P01756 117 aa13.83□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 P01757 117 aa13.83□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Parp4E9PYK3 1969 aa13.83□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 P01837 106 aa13.83□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Prr12E9PYL2 2035 aaKnown RBP13.82□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Igkv8-26A0A075B5N5 123 aa13.82□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Igkv4-74A0A0B4J1I3 119 aa13.82□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Higd2aQ9CQJ1 106 aa13.82□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Ly6g5bQ8K1T4 194 aa13.82□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Zfand3Q497H0 227 aa13.82□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Znrf2Q71FD5 238 aa13.82□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 P04944 107 aa13.81□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 B230307C23RikQ8BLB2 64 aa13.81□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Inafm2A0A1L1STD6 152 aa13.81□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Trav12d-3A0A075B6A4 115 aa13.81□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 1700012A03RikQ9DAF1 130 aa13.81□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Rpl39P62892 51 aa13.8□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 IgipA0A1B0GR74 53 aa13.8□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Col5a3Q9JLI2 1739 aa13.79□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Defa21Q8C1P2 93 aa13.79□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Sorl1O88307 2215 aaKnown RBP13.79□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Trav13d-4A0A0G2JFX3 110 aa13.79□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Fam19a4Q7TPG5 135 aa13.79□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Reg3bP35230 175 aa13.78□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Lst1O08843 95 aa13.78□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Dkk4Q8VEJ3 221 aa13.78□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Egr2P08152 470 aa13.78□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Trav6n-6A0A075B6B2 114 aa13.78□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 P84751 237 aa13.78□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Gm10518F6UQQ9 182 aa13.77□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Fam241bQ9D882 120 aa13.77□□□□□ -0.2
Smarcc1-207ENSMUST00000199896 Sdk1Q3UH53 2193 aa13.77□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Ccl25O35903 144 aa13.77□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Lmo4P61969 165 aa13.77□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Foxi2Q3I5G5 311 aa13.77□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 4930470P17RikQ9D542 155 aa13.76□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Gm9958Q8C9U4 106 aa13.76□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Pet100P0DJE0 76 aa13.75□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Defb47Q30KN1 79 aa13.75□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Camk2n2Q78WH7 79 aa13.75□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Trav13n-1A0A0G2JEU8 110 aa13.75□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Trav13-2A0A075B649 110 aa13.75□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 MifP34884 115 aaKnown RBP13.75□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Igkv1-88A0A140T8N1 120 aa13.74□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 HelzQ6DFV5 1964 aaKnown RBP13.74□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Gm9925F6T2U3 160 aa13.73□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Trav13d-1A0A075B606 110 aa13.73□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Glrp1E9Q9S8 174 aa13.73□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 P01820 115 aa13.73□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Oxld1Q9CR10 201 aa13.73□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Gm10251J3QPM5 127 aa13.73□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Odf3l1Q810P2 275 aa13.73□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Gm2916Q9D9B9 127 aa13.73□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Col24a1Q30D77 1733 aa13.72□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Vsig4F6TUL9 280 aa13.72□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Klk5Q9D140 293 aa13.72□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Piezo1E2JF22 2547 aa13.72□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Cox7b2Q9D2H1 82 aa13.72□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Sprr3O09116 238 aa13.72□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Ucn2Q99ML8 113 aa13.72□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Col4a6B1AVK5 1691 aa13.72□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Trbv16A0A0B4J1H3 115 aa13.71□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 C920008G01RikA0A0B4J1N1 112 aa13.71□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Ebi3O35228 228 aa13.71□□□□□ -0.21
Smarcc1-207ENSMUST00000199896 Clec4b2Q67DU8 208 aa13.71□□□□□ -0.22
Smarcc1-207ENSMUST00000199896 Wfdc2Q9DAU7 174 aa13.71□□□□□ -0.22
Smarcc1-207ENSMUST00000199896 Timm17aQ9Z0V8 171 aa13.7□□□□□ -0.22
Smarcc1-207ENSMUST00000199896 Ociad2Q9D8W7 154 aa13.7□□□□□ -0.22
Smarcc1-207ENSMUST00000199896 PkigO70139 76 aa13.7□□□□□ -0.22
Smarcc1-207ENSMUST00000199896 Wdr90Q6ZPG2 1874 aa13.7□□□□□ -0.22
Smarcc1-207ENSMUST00000199896 Gm14137Q8CE97 175 aa13.69□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 47.6 ms