RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 Rhox8Q6VSS7 320 aa32.36■■■□□ 2.77
Smarcc1-207ENSMUST00000199896 Ehmt2Q9Z148 1263 aaKnown RBP28.88■■■□□ 2.21
Smarcc1-207ENSMUST00000199896 Ccdc136Q3TVA9 1136 aa28.72■■■□□ 2.19
Smarcc1-207ENSMUST00000199896 Esf1Q3V1V3 845 aaKnown RBP28.62■■■□□ 2.17
Smarcc1-207ENSMUST00000199896 Cngb1E1AZ71 1325 aa28.52■■■□□ 2.16
Smarcc1-207ENSMUST00000199896 Rpgrip1Q9EPQ2 1331 aa28.5■■■□□ 2.15
Smarcc1-207ENSMUST00000199896 Gab3Q8BSM5 595 aa28.14■■■□□ 2.1
Smarcc1-207ENSMUST00000199896 Zeb1Q64318 1117 aa28.14■■■□□ 2.09
Smarcc1-207ENSMUST00000199896 Ube2uB1AUC4 352 aa28.13■■■□□ 2.09
Smarcc1-207ENSMUST00000199896 Wdr66E9Q743 1299 aa27.99■■■□□ 2.07
Smarcc1-207ENSMUST00000199896 Npm2Q80W85 207 aa27.95■■■□□ 2.06
Smarcc1-207ENSMUST00000199896 Trim41Q5NCC3 630 aa27.92■■■□□ 2.06
Smarcc1-207ENSMUST00000199896 Las1lA2BE28 776 aaKnown RBP27.9■■■□□ 2.06
Smarcc1-207ENSMUST00000199896 Myt1lP97500 1187 aa27.75■■■□□ 2.03
Smarcc1-207ENSMUST00000199896 NischQ80TM9 1593 aa27.69■■■□□ 2.02
Smarcc1-207ENSMUST00000199896 Pelp1Q9DBD5 1123 aaKnown RBP27.03■■□□□ 1.92
Smarcc1-207ENSMUST00000199896 UbtfP25976 765 aaKnown RBP27.01■■□□□ 1.91
Smarcc1-207ENSMUST00000199896 Il27Q8K3I6 234 aa26.94■■□□□ 1.9
Smarcc1-207ENSMUST00000199896 Slc24a1Q91WD8 1130 aa26.61■■□□□ 1.85
Smarcc1-207ENSMUST00000199896 NefmP08553 848 aa26.6■■□□□ 1.85
Smarcc1-207ENSMUST00000199896 Acin1Q9JIX8 1338 aaKnown RBP26.55■■□□□ 1.84
Smarcc1-207ENSMUST00000199896 Ap3b1Q9Z1T1 1105 aa26.39■■□□□ 1.81
Smarcc1-207ENSMUST00000199896 Abcc9P70170 1546 aa26.38■■□□□ 1.81
Smarcc1-207ENSMUST00000199896 Stra8P70278 393 aa26.33■■□□□ 1.81
Smarcc1-207ENSMUST00000199896 Zcchc6Q5BLK4 1491 aaKnown RBP26.32■■□□□ 1.8
Smarcc1-207ENSMUST00000199896 Fam50aQ9WV03 339 aaKnown RBP26.28■■□□□ 1.8
Smarcc1-207ENSMUST00000199896 HrcG5E8J6 738 aa26.26■■□□□ 1.79
Smarcc1-207ENSMUST00000199896 Neurod1Q60867 357 aa26.2■■□□□ 1.78
Smarcc1-207ENSMUST00000199896 CenpbP27790 599 aa26.19■■□□□ 1.78
Smarcc1-207ENSMUST00000199896 Gm35339A0A140LHH9 1649 aa26.18■■□□□ 1.78
Smarcc1-207ENSMUST00000199896 Ccdc180J3QNE4 1664 aa26.08■■□□□ 1.77
Smarcc1-207ENSMUST00000199896 Os9Q8K2C7 672 aa26.03■■□□□ 1.76
Smarcc1-207ENSMUST00000199896 Amer1Q7TS75 1132 aa26.02■■□□□ 1.76
Smarcc1-207ENSMUST00000199896 NclP09405 707 aaKnown RBP25.97■■□□□ 1.75
Smarcc1-207ENSMUST00000199896 NrdcQ8BHG1 1161 aa25.91■■□□□ 1.74
Smarcc1-207ENSMUST00000199896 Anp32bQ9EST5 272 aaKnown RBP25.91■■□□□ 1.74
Smarcc1-207ENSMUST00000199896 Cdk11bP24788 784 aaKnown RBP25.88■■□□□ 1.73
Smarcc1-207ENSMUST00000199896 Ppargc1bQ8VHJ7 1014 aa25.85■■□□□ 1.73
Smarcc1-207ENSMUST00000199896 Npm1Q61937 292 aaKnown RBP25.71■■□□□ 1.71
Smarcc1-207ENSMUST00000199896 Zbtb7cQ8VCZ7 619 aa25.7■■□□□ 1.71
Smarcc1-207ENSMUST00000199896 Eif5bQ05D44 1216 aaKnown RBP25.69■■□□□ 1.7
Smarcc1-207ENSMUST00000199896 Lmod2Q3UHZ5 550 aa25.62■■□□□ 1.69
Smarcc1-207ENSMUST00000199896 Nop58Q6DFW4 536 aaKnown RBP25.6■■□□□ 1.69
Smarcc1-207ENSMUST00000199896 Rtl1Q7M732 1744 aa25.59■■□□□ 1.69
Smarcc1-207ENSMUST00000199896 NeflP08551 543 aa25.58■■□□□ 1.69
Smarcc1-207ENSMUST00000199896 Pcgf6Q99NA9 353 aa25.56■■□□□ 1.68
Smarcc1-207ENSMUST00000199896 TonslQ6NZL6 1363 aa25.55■■□□□ 1.68
Smarcc1-207ENSMUST00000199896 Ifnlr1Q8CGK5 535 aa25.54■■□□□ 1.68
Smarcc1-207ENSMUST00000199896 Hnrnpul2Q00PI9 745 aaKnown RBP25.5■■□□□ 1.67
Smarcc1-207ENSMUST00000199896 Ttbk1Q6PCN3 1308 aa25.45■■□□□ 1.67
Smarcc1-207ENSMUST00000199896 Tnnt3Q9QZ47 272 aa25.42■■□□□ 1.66
Smarcc1-207ENSMUST00000199896 Plekhg3Q4VAC9 1341 aa25.42■■□□□ 1.66
Smarcc1-207ENSMUST00000199896 Gm13697A2AK42 830 aa25.41■■□□□ 1.66
Smarcc1-207ENSMUST00000199896 Mier1Q5UAK0 511 aa25.39■■□□□ 1.66
Smarcc1-207ENSMUST00000199896 4933416C03RikQ3V063 378 aa25.29■■□□□ 1.64
Smarcc1-207ENSMUST00000199896 Supt5hO55201 1082 aaKnown RBP25.27■■□□□ 1.64
Smarcc1-207ENSMUST00000199896 Chic1Q8CBW7 227 aa25.25■■□□□ 1.63
Smarcc1-207ENSMUST00000199896 Zbtb4Q5F293 982 aa25.25■■□□□ 1.63
Smarcc1-207ENSMUST00000199896 Erich6D3Z6S9 713 aa25.2■■□□□ 1.62
Smarcc1-207ENSMUST00000199896 Fkbp15Q6P9Q6 1216 aaKnown RBP25.18■■□□□ 1.62
Smarcc1-207ENSMUST00000199896 Atp1b4Q99ME6 356 aa25.15■■□□□ 1.62
Smarcc1-207ENSMUST00000199896 Prdm10Q3UTQ7 1184 aa25.05■■□□□ 1.6
Smarcc1-207ENSMUST00000199896 Abcc8B2RUS7 1588 aa25.03■■□□□ 1.6
Smarcc1-207ENSMUST00000199896 Plppr3Q7TPB0 716 aa25.01■■□□□ 1.59
Smarcc1-207ENSMUST00000199896 4930567H17RikQ3V0K5 233 aa24.98■■□□□ 1.59
Smarcc1-207ENSMUST00000199896 Gm13695A2AK44 830 aa24.95■■□□□ 1.59
Smarcc1-207ENSMUST00000199896 Eid3Q3V124 375 aa24.95■■□□□ 1.59
Smarcc1-207ENSMUST00000199896 Mapk8ip2Q9ERE9 830 aa24.93■■□□□ 1.58
Smarcc1-207ENSMUST00000199896 Nlrp6Q91WS2 869 aa24.9■■□□□ 1.58
Smarcc1-207ENSMUST00000199896 Ubl4bQ9CQ84 188 aa24.88■■□□□ 1.57
Smarcc1-207ENSMUST00000199896 Brd4Q9ESU6 1400 aaKnown RBP24.85■■□□□ 1.57
Smarcc1-207ENSMUST00000199896 Clip1Q922J3 1391 aa24.83■■□□□ 1.57
Smarcc1-207ENSMUST00000199896 ClspnQ80YR7 1315 aa24.82■■□□□ 1.56
Smarcc1-207ENSMUST00000199896 Polr3glQ8R0C0 218 aa24.77■■□□□ 1.56
Smarcc1-207ENSMUST00000199896 Hdac5Q9Z2V6 1113 aa24.66■■□□□ 1.54
Smarcc1-207ENSMUST00000199896 Chic2Q9D9G3 165 aa24.59■■□□□ 1.53
Smarcc1-207ENSMUST00000199896 Myt1Q8CFC2 1127 aa24.55■■□□□ 1.52
Smarcc1-207ENSMUST00000199896 Cep164Q5DU05 1446 aa24.48■■□□□ 1.51
Smarcc1-207ENSMUST00000199896 Ccer2J3QPU5 274 aa24.46■■□□□ 1.51
Smarcc1-207ENSMUST00000199896 Rangap1P46061 589 aaKnown RBP24.45■■□□□ 1.5
Smarcc1-207ENSMUST00000199896 Rtl5Q5DTT4 599 aa24.45■■□□□ 1.5
Smarcc1-207ENSMUST00000199896 ArxO35085 564 aa24.43■■□□□ 1.5
Smarcc1-207ENSMUST00000199896 Anp32aO35381 247 aa24.43■■□□□ 1.5
Smarcc1-207ENSMUST00000199896 Csrnp3P59055 597 aa24.42■■□□□ 1.5
Smarcc1-207ENSMUST00000199896 Rb1cc1Q9ESK9 1588 aa24.41■■□□□ 1.5
Smarcc1-207ENSMUST00000199896 DaxxO35613 739 aa24.39■■□□□ 1.49
Smarcc1-207ENSMUST00000199896 Safb2Q80YR5 991 aaKnown RBP24.39■■□□□ 1.49
Smarcc1-207ENSMUST00000199896 BlmO88700 1416 aa24.37■■□□□ 1.49
Smarcc1-207ENSMUST00000199896 Sall2Q9QX96 1004 aa24.36■■□□□ 1.49
Smarcc1-207ENSMUST00000199896 DiexfQ8BTT6 772 aaKnown RBP24.36■■□□□ 1.49
Smarcc1-207ENSMUST00000199896 Dcaf1Q80TR8 1506 aa24.32■■□□□ 1.48
Smarcc1-207ENSMUST00000199896 Rad21Q61550 635 aaKnown RBP24.28■■□□□ 1.48
Smarcc1-207ENSMUST00000199896 Gm38655A0A286YDK6 273 aa24.28■■□□□ 1.48
Smarcc1-207ENSMUST00000199896 Clstn2Q9ER65 966 aa24.26■■□□□ 1.47
Smarcc1-207ENSMUST00000199896 P3h3Q8CG70 732 aa24.25■■□□□ 1.47
Smarcc1-207ENSMUST00000199896 Setd5Q5XJV7 1441 aa24.17■■□□□ 1.46
Smarcc1-207ENSMUST00000199896 Mrs2Q5NCE8 434 aa24.14■■□□□ 1.46
Smarcc1-207ENSMUST00000199896 Kif15Q6P9L6 1387 aa24.11■■□□□ 1.45
Smarcc1-207ENSMUST00000199896 Rgl3Q3UYI5 709 aa24.09■■□□□ 1.45
Smarcc1-207ENSMUST00000199896 Calr4Q3TQS0 420 aa24.02■■□□□ 1.44
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms