RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 Rhox8Q6VSS7 320 aa32,36■■■□□ 2,77
Smarcc1-207ENSMUST00000199896 Ehmt2Q9Z148 1263 aaKnown RBP28,88■■■□□ 2,21
Smarcc1-207ENSMUST00000199896 Ccdc136Q3TVA9 1136 aa28,72■■■□□ 2,19
Smarcc1-207ENSMUST00000199896 Esf1Q3V1V3 845 aaKnown RBP28,62■■■□□ 2,17
Smarcc1-207ENSMUST00000199896 Cngb1E1AZ71 1325 aa28,52■■■□□ 2,16
Smarcc1-207ENSMUST00000199896 Rpgrip1Q9EPQ2 1331 aa28,5■■■□□ 2,15
Smarcc1-207ENSMUST00000199896 Gab3Q8BSM5 595 aa28,14■■■□□ 2,1
Smarcc1-207ENSMUST00000199896 Zeb1Q64318 1117 aa28,14■■■□□ 2,09
Smarcc1-207ENSMUST00000199896 Ube2uB1AUC4 352 aa28,13■■■□□ 2,09
Smarcc1-207ENSMUST00000199896 Wdr66E9Q743 1299 aa27,99■■■□□ 2,07
Smarcc1-207ENSMUST00000199896 Npm2Q80W85 207 aa27,95■■■□□ 2,06
Smarcc1-207ENSMUST00000199896 Trim41Q5NCC3 630 aa27,92■■■□□ 2,06
Smarcc1-207ENSMUST00000199896 Las1lA2BE28 776 aaKnown RBP27,9■■■□□ 2,06
Smarcc1-207ENSMUST00000199896 Myt1lP97500 1187 aa27,75■■■□□ 2,03
Smarcc1-207ENSMUST00000199896 NischQ80TM9 1593 aa27,69■■■□□ 2,02
Smarcc1-207ENSMUST00000199896 Pelp1Q9DBD5 1123 aaKnown RBP27,03■■□□□ 1,92
Smarcc1-207ENSMUST00000199896 UbtfP25976 765 aaKnown RBP27,01■■□□□ 1,91
Smarcc1-207ENSMUST00000199896 Il27Q8K3I6 234 aa26,94■■□□□ 1,9
Smarcc1-207ENSMUST00000199896 Slc24a1Q91WD8 1130 aa26,61■■□□□ 1,85
Smarcc1-207ENSMUST00000199896 NefmP08553 848 aa26,6■■□□□ 1,85
Smarcc1-207ENSMUST00000199896 Acin1Q9JIX8 1338 aaKnown RBP26,55■■□□□ 1,84
Smarcc1-207ENSMUST00000199896 Ap3b1Q9Z1T1 1105 aa26,39■■□□□ 1,81
Smarcc1-207ENSMUST00000199896 Abcc9P70170 1546 aa26,38■■□□□ 1,81
Smarcc1-207ENSMUST00000199896 Stra8P70278 393 aa26,33■■□□□ 1,81
Smarcc1-207ENSMUST00000199896 Zcchc6Q5BLK4 1491 aaKnown RBP26,32■■□□□ 1,8
Smarcc1-207ENSMUST00000199896 Fam50aQ9WV03 339 aaKnown RBP26,28■■□□□ 1,8
Smarcc1-207ENSMUST00000199896 HrcG5E8J6 738 aa26,26■■□□□ 1,79
Smarcc1-207ENSMUST00000199896 Neurod1Q60867 357 aa26,2■■□□□ 1,78
Smarcc1-207ENSMUST00000199896 CenpbP27790 599 aa26,19■■□□□ 1,78
Smarcc1-207ENSMUST00000199896 Gm35339A0A140LHH9 1649 aa26,18■■□□□ 1,78
Smarcc1-207ENSMUST00000199896 Ccdc180J3QNE4 1664 aa26,08■■□□□ 1,77
Smarcc1-207ENSMUST00000199896 Os9Q8K2C7 672 aa26,03■■□□□ 1,76
Smarcc1-207ENSMUST00000199896 Amer1Q7TS75 1132 aa26,02■■□□□ 1,76
Smarcc1-207ENSMUST00000199896 NclP09405 707 aaKnown RBP25,97■■□□□ 1,75
Smarcc1-207ENSMUST00000199896 NrdcQ8BHG1 1161 aa25,91■■□□□ 1,74
Smarcc1-207ENSMUST00000199896 Anp32bQ9EST5 272 aaKnown RBP25,91■■□□□ 1,74
Smarcc1-207ENSMUST00000199896 Cdk11bP24788 784 aaKnown RBP25,88■■□□□ 1,73
Smarcc1-207ENSMUST00000199896 Ppargc1bQ8VHJ7 1014 aa25,85■■□□□ 1,73
Smarcc1-207ENSMUST00000199896 Npm1Q61937 292 aaKnown RBP25,71■■□□□ 1,71
Smarcc1-207ENSMUST00000199896 Zbtb7cQ8VCZ7 619 aa25,7■■□□□ 1,71
Smarcc1-207ENSMUST00000199896 Eif5bQ05D44 1216 aaKnown RBP25,69■■□□□ 1,7
Smarcc1-207ENSMUST00000199896 Lmod2Q3UHZ5 550 aa25,62■■□□□ 1,69
Smarcc1-207ENSMUST00000199896 Nop58Q6DFW4 536 aaKnown RBP25,6■■□□□ 1,69
Smarcc1-207ENSMUST00000199896 Rtl1Q7M732 1744 aa25,59■■□□□ 1,69
Smarcc1-207ENSMUST00000199896 NeflP08551 543 aa25,58■■□□□ 1,69
Smarcc1-207ENSMUST00000199896 Pcgf6Q99NA9 353 aa25,56■■□□□ 1,68
Smarcc1-207ENSMUST00000199896 TonslQ6NZL6 1363 aa25,55■■□□□ 1,68
Smarcc1-207ENSMUST00000199896 Ifnlr1Q8CGK5 535 aa25,54■■□□□ 1,68
Smarcc1-207ENSMUST00000199896 Hnrnpul2Q00PI9 745 aaKnown RBP25,5■■□□□ 1,67
Smarcc1-207ENSMUST00000199896 Ttbk1Q6PCN3 1308 aa25,45■■□□□ 1,67
Smarcc1-207ENSMUST00000199896 Tnnt3Q9QZ47 272 aa25,42■■□□□ 1,66
Smarcc1-207ENSMUST00000199896 Plekhg3Q4VAC9 1341 aa25,42■■□□□ 1,66
Smarcc1-207ENSMUST00000199896 Gm13697A2AK42 830 aa25,41■■□□□ 1,66
Smarcc1-207ENSMUST00000199896 Mier1Q5UAK0 511 aa25,39■■□□□ 1,66
Smarcc1-207ENSMUST00000199896 4933416C03RikQ3V063 378 aa25,29■■□□□ 1,64
Smarcc1-207ENSMUST00000199896 Supt5hO55201 1082 aaKnown RBP25,27■■□□□ 1,64
Smarcc1-207ENSMUST00000199896 Chic1Q8CBW7 227 aa25,25■■□□□ 1,63
Smarcc1-207ENSMUST00000199896 Zbtb4Q5F293 982 aa25,25■■□□□ 1,63
Smarcc1-207ENSMUST00000199896 Erich6D3Z6S9 713 aa25,2■■□□□ 1,62
Smarcc1-207ENSMUST00000199896 Fkbp15Q6P9Q6 1216 aaKnown RBP25,18■■□□□ 1,62
Smarcc1-207ENSMUST00000199896 Atp1b4Q99ME6 356 aa25,15■■□□□ 1,62
Smarcc1-207ENSMUST00000199896 Prdm10Q3UTQ7 1184 aa25,05■■□□□ 1,6
Smarcc1-207ENSMUST00000199896 Abcc8B2RUS7 1588 aa25,03■■□□□ 1,6
Smarcc1-207ENSMUST00000199896 Plppr3Q7TPB0 716 aa25,01■■□□□ 1,59
Smarcc1-207ENSMUST00000199896 4930567H17RikQ3V0K5 233 aa24,98■■□□□ 1,59
Smarcc1-207ENSMUST00000199896 Gm13695A2AK44 830 aa24,95■■□□□ 1,59
Smarcc1-207ENSMUST00000199896 Eid3Q3V124 375 aa24,95■■□□□ 1,59
Smarcc1-207ENSMUST00000199896 Mapk8ip2Q9ERE9 830 aa24,93■■□□□ 1,58
Smarcc1-207ENSMUST00000199896 Nlrp6Q91WS2 869 aa24,9■■□□□ 1,58
Smarcc1-207ENSMUST00000199896 Ubl4bQ9CQ84 188 aa24,88■■□□□ 1,57
Smarcc1-207ENSMUST00000199896 Brd4Q9ESU6 1400 aaKnown RBP24,85■■□□□ 1,57
Smarcc1-207ENSMUST00000199896 Clip1Q922J3 1391 aa24,83■■□□□ 1,57
Smarcc1-207ENSMUST00000199896 ClspnQ80YR7 1315 aa24,82■■□□□ 1,56
Smarcc1-207ENSMUST00000199896 Polr3glQ8R0C0 218 aa24,77■■□□□ 1,56
Smarcc1-207ENSMUST00000199896 Hdac5Q9Z2V6 1113 aa24,66■■□□□ 1,54
Smarcc1-207ENSMUST00000199896 Chic2Q9D9G3 165 aa24,59■■□□□ 1,53
Smarcc1-207ENSMUST00000199896 Myt1Q8CFC2 1127 aa24,55■■□□□ 1,52
Smarcc1-207ENSMUST00000199896 Cep164Q5DU05 1446 aa24,48■■□□□ 1,51
Smarcc1-207ENSMUST00000199896 Ccer2J3QPU5 274 aa24,46■■□□□ 1,51
Smarcc1-207ENSMUST00000199896 Rangap1P46061 589 aaKnown RBP24,45■■□□□ 1,5
Smarcc1-207ENSMUST00000199896 Rtl5Q5DTT4 599 aa24,45■■□□□ 1,5
Smarcc1-207ENSMUST00000199896 ArxO35085 564 aa24,43■■□□□ 1,5
Smarcc1-207ENSMUST00000199896 Anp32aO35381 247 aa24,43■■□□□ 1,5
Smarcc1-207ENSMUST00000199896 Csrnp3P59055 597 aa24,42■■□□□ 1,5
Smarcc1-207ENSMUST00000199896 Rb1cc1Q9ESK9 1588 aa24,41■■□□□ 1,5
Smarcc1-207ENSMUST00000199896 DaxxO35613 739 aa24,39■■□□□ 1,49
Smarcc1-207ENSMUST00000199896 Safb2Q80YR5 991 aaKnown RBP24,39■■□□□ 1,49
Smarcc1-207ENSMUST00000199896 BlmO88700 1416 aa24,37■■□□□ 1,49
Smarcc1-207ENSMUST00000199896 Sall2Q9QX96 1004 aa24,36■■□□□ 1,49
Smarcc1-207ENSMUST00000199896 DiexfQ8BTT6 772 aaKnown RBP24,36■■□□□ 1,49
Smarcc1-207ENSMUST00000199896 Dcaf1Q80TR8 1506 aa24,32■■□□□ 1,48
Smarcc1-207ENSMUST00000199896 Rad21Q61550 635 aaKnown RBP24,28■■□□□ 1,48
Smarcc1-207ENSMUST00000199896 Gm38655A0A286YDK6 273 aa24,28■■□□□ 1,48
Smarcc1-207ENSMUST00000199896 Clstn2Q9ER65 966 aa24,26■■□□□ 1,47
Smarcc1-207ENSMUST00000199896 P3h3Q8CG70 732 aa24,25■■□□□ 1,47
Smarcc1-207ENSMUST00000199896 Setd5Q5XJV7 1441 aa24,17■■□□□ 1,46
Smarcc1-207ENSMUST00000199896 Mrs2Q5NCE8 434 aa24,14■■□□□ 1,46
Smarcc1-207ENSMUST00000199896 Kif15Q6P9L6 1387 aa24,11■■□□□ 1,45
Smarcc1-207ENSMUST00000199896 Rgl3Q3UYI5 709 aa24,09■■□□□ 1,45
Smarcc1-207ENSMUST00000199896 Calr4Q3TQS0 420 aa24,02■■□□□ 1,44
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