RNA–Protein interactions for RNA: ENSMUST00000180353.1

Sox1-201, Transcript of Transcription factor SOX-1, mousemouse

APPRIS P1 BASIC

Gene Sox1, Length 4,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1-201ENSMUST00000180353 Tmem254bP0DN90 123 aa16.57■□□□□ 0.24
Sox1-201ENSMUST00000180353 Tmem254cP0DN91 123 aa16.57■□□□□ 0.24
Sox1-201ENSMUST00000180353 Hoxb4P10284 250 aa16.57■□□□□ 0.24
Sox1-201ENSMUST00000180353 P18527 97 aa16.57■□□□□ 0.24
Sox1-201ENSMUST00000180353 BC048562Q80ZQ7 204 aa16.56■□□□□ 0.24
Sox1-201ENSMUST00000180353 Acyp1P56376 99 aa16.56■□□□□ 0.24
Sox1-201ENSMUST00000180353 Taf15Q8BQ46 557 aaKnown RBP16.56■□□□□ 0.24
Sox1-201ENSMUST00000180353 Usmg5Q78IK2 58 aa16.56■□□□□ 0.24
Sox1-201ENSMUST00000180353 Tet2Q4JK59 1912 aaKnown RBP16.55■□□□□ 0.24
Sox1-201ENSMUST00000180353 Tmem86bQ497J1 226 aa16.55■□□□□ 0.24
Sox1-201ENSMUST00000180353 HelzQ6DFV5 1964 aaKnown RBP16.54■□□□□ 0.24
Sox1-201ENSMUST00000180353 Ighv1-52A0A0A6YXC3 117 aa16.54■□□□□ 0.24
Sox1-201ENSMUST00000180353 Ang4Q3TMQ6 144 aa16.54■□□□□ 0.24
Sox1-201ENSMUST00000180353 Tomm7Q9D173 55 aa16.54■□□□□ 0.24
Sox1-201ENSMUST00000180353 P04943 107 aa16.54■□□□□ 0.24
Sox1-201ENSMUST00000180353 BikO70337 150 aa16.53■□□□□ 0.24
Sox1-201ENSMUST00000180353 Fam19a4Q7TPG5 135 aa16.53■□□□□ 0.24
Sox1-201ENSMUST00000180353 Gata1P17679 413 aa16.53■□□□□ 0.24
Sox1-201ENSMUST00000180353 Trav14d-3-dv8A0A075B619 120 aa16.52■□□□□ 0.23
Sox1-201ENSMUST00000180353 Lyzl4Q9D925 145 aa16.52■□□□□ 0.23
Sox1-201ENSMUST00000180353 Rnf114Q9ET26 229 aa16.52■□□□□ 0.23
Sox1-201ENSMUST00000180353 Notch3Q61982 2318 aa16.51■□□□□ 0.23
Sox1-201ENSMUST00000180353 Obox8V9GWY9 217 aa16.51■□□□□ 0.23
Sox1-201ENSMUST00000180353 Vpreb2P13373 142 aa16.51■□□□□ 0.23
Sox1-201ENSMUST00000180353 Cdip1Q9DB75 208 aa16.5■□□□□ 0.23
Sox1-201ENSMUST00000180353 Gm10337F7DEP7 55 aa16.5■□□□□ 0.23
Sox1-201ENSMUST00000180353 1500011B03RikQ3TTH7 73 aa16.5■□□□□ 0.23
Sox1-201ENSMUST00000180353 AgrnA2ASQ1 1950 aa16.49■□□□□ 0.23
Sox1-201ENSMUST00000180353 Mrps21P58059 87 aa16.49■□□□□ 0.23
Sox1-201ENSMUST00000180353 Col6a4A2AX52 2309 aa16.49■□□□□ 0.23
Sox1-201ENSMUST00000180353 Rnf185Q91YT2 192 aa16.49■□□□□ 0.23
Sox1-201ENSMUST00000180353 Med13lQ6JPI3 2207 aa16.48■□□□□ 0.23
Sox1-201ENSMUST00000180353 TroQ6DIC6 2087 aa16.48■□□□□ 0.23
Sox1-201ENSMUST00000180353 Cfap126Q6P8X9 189 aa16.48■□□□□ 0.23
Sox1-201ENSMUST00000180353 Tmem263Q9DAM7 115 aa16.48■□□□□ 0.23
Sox1-201ENSMUST00000180353 Psmb8P28063 276 aa16.47■□□□□ 0.23
Sox1-201ENSMUST00000180353 Ang3P97802 145 aa16.47■□□□□ 0.23
Sox1-201ENSMUST00000180353 Nbl1Q61477 178 aa16.47■□□□□ 0.23
Sox1-201ENSMUST00000180353 Igkv4-57-1A0A075B5M4 119 aa16.47■□□□□ 0.23
Sox1-201ENSMUST00000180353 Gm9949Q8C9F4 104 aa16.47■□□□□ 0.23
Sox1-201ENSMUST00000180353 Bub3Q9WVA3 326 aa16.47■□□□□ 0.23
Sox1-201ENSMUST00000180353 Col8a2P25318 699 aa16.46■□□□□ 0.23
Sox1-201ENSMUST00000180353 Pgpep1lQ9CWB5 130 aa16.46■□□□□ 0.23
Sox1-201ENSMUST00000180353 Serp2Q6TAW2 65 aa16.45■□□□□ 0.22
Sox1-201ENSMUST00000180353 A0A286YE02 88 aa16.45■□□□□ 0.22
Sox1-201ENSMUST00000180353 Q9D8Q6 235 aa16.45■□□□□ 0.22
Sox1-201ENSMUST00000180353 1700010B08RikQ9DAI7 102 aa16.45■□□□□ 0.22
Sox1-201ENSMUST00000180353 Igkv4-68A0A0B4J1I7 117 aa16.45■□□□□ 0.22
Sox1-201ENSMUST00000180353 Ighv1-64A0A075B5X3 117 aa16.44■□□□□ 0.22
Sox1-201ENSMUST00000180353 Naa38Q9D2U5 125 aa16.44■□□□□ 0.22
Sox1-201ENSMUST00000180353 E130218I03RikA0A0U1RNU5 63 aa16.44■□□□□ 0.22
Sox1-201ENSMUST00000180353 Znf672Q99LH4 468 aa16.44■□□□□ 0.22
Sox1-201ENSMUST00000180353 Wipf1Q8K1I7 493 aa16.43■□□□□ 0.22
Sox1-201ENSMUST00000180353 Spag11Q8K4N2 71 aa16.43■□□□□ 0.22
Sox1-201ENSMUST00000180353 Spink13Q3UTS8 97 aa16.43■□□□□ 0.22
Sox1-201ENSMUST00000180353 Fer1l4A3KGK3 1992 aa16.42■□□□□ 0.22
Sox1-201ENSMUST00000180353 Ighv1-74A0A0G2JGK2 117 aa16.42■□□□□ 0.22
Sox1-201ENSMUST00000180353 Tanc2A2A690 1994 aa16.42■□□□□ 0.22
Sox1-201ENSMUST00000180353 Ube2d3P61079 147 aa16.42■□□□□ 0.22
Sox1-201ENSMUST00000180353 Ube2d2P62838 147 aa16.42■□□□□ 0.22
Sox1-201ENSMUST00000180353 Znf239P24399 201 aa16.41■□□□□ 0.22
Sox1-201ENSMUST00000180353 Ube2d1P61080 147 aaKnown RBP16.41■□□□□ 0.22
Sox1-201ENSMUST00000180353 Csdc2Q91YQ3 154 aa16.41■□□□□ 0.22
Sox1-201ENSMUST00000180353 Rpl18aP62717 176 aaKnown RBP16.41■□□□□ 0.22
Sox1-201ENSMUST00000180353 Ighv1-50A0A075B5W1 117 aa16.4■□□□□ 0.22
Sox1-201ENSMUST00000180353 AvpP35455 168 aa16.4■□□□□ 0.22
Sox1-201ENSMUST00000180353 Gm5629P06327 117 aa16.4■□□□□ 0.22
Sox1-201ENSMUST00000180353 Gm10192Q3V0S1 108 aa16.4■□□□□ 0.22
Sox1-201ENSMUST00000180353 CstadQ9D245 104 aa16.4■□□□□ 0.22
Sox1-201ENSMUST00000180353 Gm19935A0A1B0GSF9 52 aa16.39■□□□□ 0.21
Sox1-201ENSMUST00000180353 OdaphJ3QNT8 126 aa16.39■□□□□ 0.21
Sox1-201ENSMUST00000180353 Trav13d-1A0A075B606 110 aa16.39■□□□□ 0.21
Sox1-201ENSMUST00000180353 Gm3618D3Z4P5 127 aa16.39■□□□□ 0.21
Sox1-201ENSMUST00000180353 Gm2916Q9D9B9 127 aa16.39■□□□□ 0.21
Sox1-201ENSMUST00000180353 Cox17P56394 63 aa16.39■□□□□ 0.21
Sox1-201ENSMUST00000180353 Smr3aQ61900 147 aa16.39■□□□□ 0.21
Sox1-201ENSMUST00000180353 9230109A22RikQ8BHE6 111 aa16.39■□□□□ 0.21
Sox1-201ENSMUST00000180353 A830031A19RikQ8BNT5 113 aa16.39■□□□□ 0.21
Sox1-201ENSMUST00000180353 Nav2E9Q842 2432 aa16.38■□□□□ 0.21
Sox1-201ENSMUST00000180353 Ormdl1Q921I0 153 aa16.38■□□□□ 0.21
Sox1-201ENSMUST00000180353 Ighv12-3A0A075B5T1 117 aa16.38■□□□□ 0.21
Sox1-201ENSMUST00000180353 Spata25Q9DA57 226 aa16.38■□□□□ 0.21
Sox1-201ENSMUST00000180353 P04219 140 aa16.37■□□□□ 0.21
Sox1-201ENSMUST00000180353 Eml6Q5SQM0 1958 aa16.37■□□□□ 0.21
Sox1-201ENSMUST00000180353 P01750 117 aa16.37■□□□□ 0.21
Sox1-201ENSMUST00000180353 Trav13n-1A0A0G2JEU8 110 aa16.36■□□□□ 0.21
Sox1-201ENSMUST00000180353 Gm12689Q8BQU9 117 aa16.36■□□□□ 0.21
Sox1-201ENSMUST00000180353 Trbv16A0A0B4J1H3 115 aa16.36■□□□□ 0.21
Sox1-201ENSMUST00000180353 C1qcQ02105 246 aa16.36■□□□□ 0.21
Sox1-201ENSMUST00000180353 P01748 117 aa16.36■□□□□ 0.21
Sox1-201ENSMUST00000180353 Igkv1-35A0A0G2JDE5 120 aa16.35■□□□□ 0.21
Sox1-201ENSMUST00000180353 Ighv3-4A0A0A6YXF1 117 aa16.35■□□□□ 0.21
Sox1-201ENSMUST00000180353 P01725 110 aa16.35■□□□□ 0.21
Sox1-201ENSMUST00000180353 Gm15217A2CG07 155 aa16.34■□□□□ 0.21
Sox1-201ENSMUST00000180353 Msrb2Q78J03 175 aa16.34■□□□□ 0.21
Sox1-201ENSMUST00000180353 Lyrm9Q3UN90 78 aa16.33■□□□□ 0.2
Sox1-201ENSMUST00000180353 Ndufc1Q9CQY9 76 aa16.33■□□□□ 0.2
Sox1-201ENSMUST00000180353 Dido1Q8C9B9 2256 aaKnown RBP16.33■□□□□ 0.2
Sox1-201ENSMUST00000180353 Igkv4-61A0A0G2JH00 117 aa16.33■□□□□ 0.2
Sox1-201ENSMUST00000180353 Gm815Q3UWS2 115 aa16.32■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 106.6 ms