RNA–Protein interactions for RNA: ENSMUST00000171404.7

Gtf3c4-204, Transcript of General transcription factor 3C polypeptide 4, mousemouse

TSL 1 (best) BASIC

Gene Gtf3c4, Length 7,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c4-204ENSMUST00000171404 Mrpl35Q9CQL6 188 aa12.3□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Cox7b2Q9D2H1 82 aa12.29□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Foxi2Q3I5G5 311 aa12.29□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 SvipQ3UZP4 77 aa12.29□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Srsf2Q62093 221 aaKnown RBP12.29□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Sdk2Q6V4S5 2176 aa12.29□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 BikO70337 150 aa12.29□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Sptbn2Q68FG2 2388 aa12.29□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Cacna1hO88427 2365 aa12.28□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 A730015C16RikQ8C992 119 aa12.28□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Wfdc2Q9DAU7 174 aa12.28□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Wdr90Q6ZPG2 1874 aa12.28□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 PkdrejQ9Z0T6 2126 aa12.28□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Gm10735Q3US96 136 aa12.28□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Fancd2osQ9D4K4 178 aa12.28□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Ly6g5bQ8K1T4 194 aa12.28□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Cdpf1Q8R3A2 119 aa12.28□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Ndufb4Q9CQC7 129 aa12.28□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Cep295Q8BQ48 2412 aa12.28□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 C920008G01RikA0A0B4J1N1 112 aa12.28□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Tal2Q62282 108 aa12.27□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 9530003J23RikQ8BM26 151 aa12.27□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Gm10542F6XDR3 90 aa12.27□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 B9d2Q3UK10 175 aa12.27□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Atp5g1Q9CR84 136 aa12.27□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Eml6Q5SQM0 1958 aa12.27□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Tm2d1Q99MB3 208 aa12.27□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Ighv12-3A0A075B5T1 117 aa12.27□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Trav12-3A0A075B648 115 aa12.26□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Esm1Q9QYY7 184 aa12.26□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Trav9n-4A0A075B631 113 aa12.26□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Camk2n2Q78WH7 79 aa12.26□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 9230109A22RikQ8BHE6 111 aa12.26□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Igkv4-92A0A0B4J1I2 117 aa12.26□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 PemtQ61907 199 aa12.26□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 9930022D16RikQ8BG27 128 aa12.26□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Ociad2Q9D8W7 154 aa12.25□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Glrp1E9Q9S8 174 aa12.25□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Ighv2-7A0A075B5Q8 116 aa12.25□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 SptssbQ925E8 76 aa12.25□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Prop1P97458 223 aa12.25□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 1810032O08RikE9PZV8 113 aa12.24□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Atp5g3P56384 141 aa12.24□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Iglv1A0A075B663 117 aa12.24□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 DysfQ9ESD7 2090 aa12.24□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Tmem258P61166 79 aa12.24□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 AgrnA2ASQ1 1950 aa12.24□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Fer1l4A3KGK3 1992 aa12.24□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Trav7-6A0A075B640 112 aa12.23□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Ighv8-12A0A0G2JDE1 119 aa12.23□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Odf1Q61999 247 aa12.23□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 MsmpB1AWI6 139 aa12.23□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Ighv1-62-2A0A0A6YXZ4 119 aa12.23□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Nup210Q9QY81 1886 aaKnown RBP12.23□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Ccl25O35903 144 aa12.23□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 4930470P17RikQ9D542 155 aa12.23□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Fam240bJ3QMB3 78 aa12.22□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Igkv3-3A0A140T8Q0 119 aa12.22□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 AngP21570 145 aa12.22□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 P01747 120 aa12.22□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Notch4P31695 1964 aa12.21□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 Egr2P08152 470 aa12.21□□□□□ -0.45
Gtf3c4-204ENSMUST00000171404 U90926O08546 118 aa12.2□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Fam222aQ6PGH4 453 aa12.2□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Asxl3Q8C4A5 2259 aa12.2□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Ighv1-62-1A0A075B5U3 116 aa12.2□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Pcnx1Q9QYC1 2344 aa12.2□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Gm15557A6PWY0 234 aa12.2□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 1500011B03RikQ3TTH7 73 aa12.2□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Gm20708H3BKF4 155 aa12.19□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Gm10638F6QEG2 257 aa12.19□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Arfgef3Q3UGY8 2170 aa12.19□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Lhfpl1Q80SV1 220 aa12.19□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Q99M08 65 aa12.19□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Gm37389A0A0A6YW05 95 aa12.19□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Arhgef17Q80U35 2057 aa12.19□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 CstadQ9D245 104 aa12.18□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Prpf8Q99PV0 2335 aaKnown RBP12.18□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Gata3P23772 443 aa12.18□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Fam19a1Q7TPG8 133 aa12.18□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Rnase1P00683 149 aa12.17□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Fam110aQ8R184 296 aa12.17□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Ighv1-53A0A075B5W3 117 aa12.17□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Gp9O88186 177 aa12.17□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 P01748 117 aa12.17□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 PscaP57096 123 aa12.17□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Fam19a4Q7TPG5 135 aa12.17□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 P04940 107 aa12.17□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 P04941 107 aa12.17□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Rpl39lQ9CQD0 51 aa12.17□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Gm42674D3YUT9 64 aa12.16□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Iglc1A0A0G2JE99 106 aa12.16□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 P01843 105 aa12.16□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Gm6034E9Q101 117 aa12.16□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Gm19684G3UZ45 117 aa12.16□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Fgf6P21658 208 aa12.16□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Rspo3Q2TJ95 277 aa12.16□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 2010109I03RikQ9CQ11 111 aa12.16□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Trav6n-6A0A075B6B2 114 aa12.15□□□□□ -0.46
Gtf3c4-204ENSMUST00000171404 Vsig4F6TUL9 280 aa12.15□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 176.9 ms