RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Srsf2Q62093 221 aaKnown RBP12.45□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Ighv1-77A0A0G2JGS9 117 aa12.45□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 BlcapP62951 87 aa12.45□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 P01630 113 aa12.45□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Fhl1P97447 280 aaKnown RBP12.45□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Parp4E9PYK3 1969 aa12.45□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Prop1P97458 223 aa12.44□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Foxi2Q3I5G5 311 aa12.44□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Greb1Q3UHK3 1954 aa12.44□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Prh1P05142 261 aa12.44□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 9930022D16RikQ8BG27 128 aa12.44□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Ly6g5bQ8K1T4 194 aa12.44□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Nop10Q9CQS2 64 aa12.44□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Gm9925F6T2U3 160 aa12.44□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Ighv13-2A0A0A6YWN3 119 aa12.43□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Ang4Q3TMQ6 144 aa12.43□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 C920008G01RikA0A0B4J1N1 112 aa12.43□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Tet1Q3URK3 2007 aaKnown RBP12.43□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Crlf1Q9JM58 425 aa12.43□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Ptpn13Q64512 2453 aa12.42□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Arhgap21Q6DFV3 1944 aa12.42□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 1110002E22RikE0CYV9 1786 aa12.42□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 MifP34884 115 aaKnown RBP12.42□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Iglc1A0A0G2JE99 106 aa12.42□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 P01843 105 aa12.42□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Gm5941Q497P9 117 aa12.42□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Notch2O35516 2470 aa12.42□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 P01756 117 aa12.42□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 P01757 117 aa12.42□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 OdaphJ3QNT8 126 aa12.41□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Lst1O08843 95 aa12.41□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Pla2g2cP48076 150 aa12.41□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Plscr4P58196 326 aa12.41□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Trav9d-3A0A075B695 113 aa12.41□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Gm10553J3QPF1 123 aa12.41□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Fam241bQ9D882 120 aa12.41□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 P01750 117 aa12.41□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 UrahQ9CRB3 118 aa12.41□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 PkdrejQ9Z0T6 2126 aa12.41□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 A230072I06RikQ3UUJ8 172 aa12.41□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Brwd1Q921C3 2304 aa12.41□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Ighv3-1A0A075B5S6 116 aa12.4□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Gp9O88186 177 aa12.4□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 P01837 106 aa12.4□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Ndufs7Q9DC70 224 aa12.4□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Glrp1E9Q9S8 174 aa12.4□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Gm20708H3BKF4 155 aa12.4□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Notch3Q61982 2318 aa12.4□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Piezo2Q8CD54 2822 aa12.4□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Trav9-2A0A075B647 113 aa12.4□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Trav9-4A0A0B4J1K2 113 aa12.4□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Tm2d1Q99MB3 208 aa12.4□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Mrpl52Q9D0Y8 121 aa12.4□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Tmem258P61166 79 aa12.4□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 HelzQ6DFV5 1964 aaKnown RBP12.39□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Heatr5aQ5PRF0 2038 aa12.39□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Trav9n-2A0A0G2JDP3 113 aa12.39□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Igkv1-122A0A140T8M9 119 aa12.39□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Gm15217A2CG07 155 aa12.39□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Foxc1Q61572 553 aa12.38□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Gm9936Q8C864 160 aa12.38□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 9130230L23RikQ8CC80 163 aa12.38□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 P04942 107 aa12.38□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Cox17P56394 63 aa12.38□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 NpyP57774 97 aa12.38□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Rpl39P62892 51 aa12.38□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Znf672Q99LH4 468 aa12.38□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Ucn2Q99ML8 113 aa12.38□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Brk1Q91VR8 75 aa12.37□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Dand5Q76LW6 185 aa12.37□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Trav7-6A0A075B640 112 aa12.37□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Ighv1-52A0A0A6YXC3 117 aa12.36□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 4930546C10RikE9Q4Y3 121 aa12.36□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Spink8Q09TK9 105 aa12.36□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Nbl1Q61477 178 aa12.36□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Tax1bp3Q9DBG9 124 aa12.36□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 PemtQ61907 199 aa12.36□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Wipf1Q8K1I7 493 aa12.36□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 P01753 117 aa12.36□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Gm26602M0QWA4 95 aa12.35□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Hoxb4P10284 250 aa12.35□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Gm17359A0A0G2JEB7 487 aa12.34□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Gm9949Q8C9F4 104 aa12.34□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Trav13n-1A0A0G2JEU8 110 aa12.34□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Lyrm9Q3UN90 78 aa12.34□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Ighv1-12A0A0A6YXJ9 117 aa12.33□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 Egr2P08152 470 aa12.33□□□□□ -0.43
Pcdh1-203ENSMUST00000160721 GfyJ3KML8 504 aa12.33□□□□□ -0.44
Pcdh1-203ENSMUST00000160721 1500011B03RikQ3TTH7 73 aa12.33□□□□□ -0.44
Pcdh1-203ENSMUST00000160721 Klk11Q9QYN3 276 aa12.33□□□□□ -0.44
Pcdh1-203ENSMUST00000160721 C2cd3Q52KB6 2323 aa12.33□□□□□ -0.44
Pcdh1-203ENSMUST00000160721 Fam19a4Q7TPG5 135 aa12.33□□□□□ -0.44
Pcdh1-203ENSMUST00000160721 Trav13d-1A0A075B606 110 aa12.33□□□□□ -0.44
Pcdh1-203ENSMUST00000160721 7420426K07RikQ3UX66 186 aa12.33□□□□□ -0.44
Pcdh1-203ENSMUST00000160721 Gm15557A6PWY0 234 aa12.32□□□□□ -0.44
Pcdh1-203ENSMUST00000160721 Mrpl35Q9CQL6 188 aa12.32□□□□□ -0.44
Pcdh1-203ENSMUST00000160721 Wfdc15bQ9JHY4 80 aa12.32□□□□□ -0.44
Pcdh1-203ENSMUST00000160721 Gm42674D3YUT9 64 aa12.32□□□□□ -0.44
Pcdh1-203ENSMUST00000160721 Dennd4cA6H8H2 1906 aa12.32□□□□□ -0.44
Pcdh1-203ENSMUST00000160721 Ankhd1E9PUR0 2548 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 60.6 ms