RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Rhox8Q6VSS7 320 aa28.85■■■□□ 2.21
Pcdh1-203ENSMUST00000160721 NischQ80TM9 1593 aa26.12■■□□□ 1.77
Pcdh1-203ENSMUST00000160721 Rpgrip1Q9EPQ2 1331 aa25.95■■□□□ 1.74
Pcdh1-203ENSMUST00000160721 Ccdc136Q3TVA9 1136 aa25.88■■□□□ 1.73
Pcdh1-203ENSMUST00000160721 Esf1Q3V1V3 845 aaKnown RBP25.78■■□□□ 1.72
Pcdh1-203ENSMUST00000160721 Ehmt2Q9Z148 1263 aaKnown RBP25.75■■□□□ 1.71
Pcdh1-203ENSMUST00000160721 Cngb1E1AZ71 1325 aa25.54■■□□□ 1.68
Pcdh1-203ENSMUST00000160721 Las1lA2BE28 776 aaKnown RBP25.19■■□□□ 1.62
Pcdh1-203ENSMUST00000160721 Zeb1Q64318 1117 aa25.12■■□□□ 1.61
Pcdh1-203ENSMUST00000160721 Trim41Q5NCC3 630 aa25.09■■□□□ 1.61
Pcdh1-203ENSMUST00000160721 Abcc9P70170 1546 aa25.09■■□□□ 1.61
Pcdh1-203ENSMUST00000160721 Wdr66E9Q743 1299 aa25.01■■□□□ 1.59
Pcdh1-203ENSMUST00000160721 Gab3Q8BSM5 595 aa25.01■■□□□ 1.59
Pcdh1-203ENSMUST00000160721 Npm2Q80W85 207 aa24.9■■□□□ 1.58
Pcdh1-203ENSMUST00000160721 Gm35339A0A140LHH9 1649 aa24.74■■□□□ 1.55
Pcdh1-203ENSMUST00000160721 Myt1lP97500 1187 aa24.68■■□□□ 1.54
Pcdh1-203ENSMUST00000160721 Pelp1Q9DBD5 1123 aaKnown RBP24.61■■□□□ 1.53
Pcdh1-203ENSMUST00000160721 Ube2uB1AUC4 352 aa24.6■■□□□ 1.53
Pcdh1-203ENSMUST00000160721 Il27Q8K3I6 234 aa24.48■■□□□ 1.51
Pcdh1-203ENSMUST00000160721 Zcchc6Q5BLK4 1491 aaKnown RBP24.31■■□□□ 1.48
Pcdh1-203ENSMUST00000160721 CenpbP27790 599 aa24.05■■□□□ 1.44
Pcdh1-203ENSMUST00000160721 Amer1Q7TS75 1132 aa24■■□□□ 1.43
Pcdh1-203ENSMUST00000160721 Acin1Q9JIX8 1338 aaKnown RBP24■■□□□ 1.43
Pcdh1-203ENSMUST00000160721 Abcc8B2RUS7 1588 aa23.98■■□□□ 1.43
Pcdh1-203ENSMUST00000160721 UbtfP25976 765 aaKnown RBP23.75■■□□□ 1.39
Pcdh1-203ENSMUST00000160721 NefmP08553 848 aa23.7■■□□□ 1.38
Pcdh1-203ENSMUST00000160721 Slc24a1Q91WD8 1130 aa23.66■■□□□ 1.38
Pcdh1-203ENSMUST00000160721 Ap3b1Q9Z1T1 1105 aa23.62■■□□□ 1.37
Pcdh1-203ENSMUST00000160721 Npm1Q61937 292 aaKnown RBP23.56■■□□□ 1.36
Pcdh1-203ENSMUST00000160721 Stra8P70278 393 aa23.52■■□□□ 1.36
Pcdh1-203ENSMUST00000160721 HrcG5E8J6 738 aa23.4■■□□□ 1.34
Pcdh1-203ENSMUST00000160721 Pcgf6Q99NA9 353 aa23.38■■□□□ 1.33
Pcdh1-203ENSMUST00000160721 Ttbk1Q6PCN3 1308 aa23.37■■□□□ 1.33
Pcdh1-203ENSMUST00000160721 Cdk11bP24788 784 aaKnown RBP23.36■■□□□ 1.33
Pcdh1-203ENSMUST00000160721 Ccdc180J3QNE4 1664 aa23.32■■□□□ 1.32
Pcdh1-203ENSMUST00000160721 Fam50aQ9WV03 339 aaKnown RBP23.25■■□□□ 1.31
Pcdh1-203ENSMUST00000160721 Ifnlr1Q8CGK5 535 aa23.25■■□□□ 1.31
Pcdh1-203ENSMUST00000160721 Ubl4bQ9CQ84 188 aa23.15■■□□□ 1.3
Pcdh1-203ENSMUST00000160721 Ppargc1bQ8VHJ7 1014 aa23.09■■□□□ 1.29
Pcdh1-203ENSMUST00000160721 Nop58Q6DFW4 536 aaKnown RBP23.07■■□□□ 1.28
Pcdh1-203ENSMUST00000160721 4933416C03RikQ3V063 378 aa23.07■■□□□ 1.28
Pcdh1-203ENSMUST00000160721 Rtl1Q7M732 1744 aa23.04■■□□□ 1.28
Pcdh1-203ENSMUST00000160721 Myt1Q8CFC2 1127 aa23.02■■□□□ 1.28
Pcdh1-203ENSMUST00000160721 Neurod1Q60867 357 aa23■■□□□ 1.27
Pcdh1-203ENSMUST00000160721 Lmod2Q3UHZ5 550 aa22.99■■□□□ 1.27
Pcdh1-203ENSMUST00000160721 Zbtb7cQ8VCZ7 619 aa22.98■■□□□ 1.27
Pcdh1-203ENSMUST00000160721 Rb1cc1Q9ESK9 1588 aa22.96■■□□□ 1.27
Pcdh1-203ENSMUST00000160721 Tnnt3Q9QZ47 272 aa22.95■■□□□ 1.26
Pcdh1-203ENSMUST00000160721 Supt5hO55201 1082 aaKnown RBP22.95■■□□□ 1.26
Pcdh1-203ENSMUST00000160721 Eif5bQ05D44 1216 aaKnown RBP22.94■■□□□ 1.26
Pcdh1-203ENSMUST00000160721 NrdcQ8BHG1 1161 aa22.94■■□□□ 1.26
Pcdh1-203ENSMUST00000160721 4930567H17RikQ3V0K5 233 aa22.93■■□□□ 1.26
Pcdh1-203ENSMUST00000160721 Os9Q8K2C7 672 aa22.92■■□□□ 1.26
Pcdh1-203ENSMUST00000160721 Fkbp15Q6P9Q6 1216 aaKnown RBP22.92■■□□□ 1.26
Pcdh1-203ENSMUST00000160721 Brd4Q9ESU6 1400 aaKnown RBP22.9■■□□□ 1.26
Pcdh1-203ENSMUST00000160721 NacadQ5SWP3 1504 aa22.9■■□□□ 1.26
Pcdh1-203ENSMUST00000160721 NclP09405 707 aaKnown RBP22.87■■□□□ 1.25
Pcdh1-203ENSMUST00000160721 Plppr3Q7TPB0 716 aa22.83■■□□□ 1.24
Pcdh1-203ENSMUST00000160721 NeflP08551 543 aa22.78■■□□□ 1.24
Pcdh1-203ENSMUST00000160721 Hnrnpul2Q00PI9 745 aaKnown RBP22.75■■□□□ 1.23
Pcdh1-203ENSMUST00000160721 Gm13697A2AK42 830 aa22.74■■□□□ 1.23
Pcdh1-203ENSMUST00000160721 Anp32bQ9EST5 272 aaKnown RBP22.74■■□□□ 1.23
Pcdh1-203ENSMUST00000160721 Plekhg3Q4VAC9 1341 aa22.73■■□□□ 1.23
Pcdh1-203ENSMUST00000160721 TonslQ6NZL6 1363 aa22.64■■□□□ 1.21
Pcdh1-203ENSMUST00000160721 Chic1Q8CBW7 227 aa22.61■■□□□ 1.21
Pcdh1-203ENSMUST00000160721 Mier1Q5UAK0 511 aa22.51■■□□□ 1.19
Pcdh1-203ENSMUST00000160721 Erich6D3Z6S9 713 aa22.46■■□□□ 1.19
Pcdh1-203ENSMUST00000160721 Ercc6F8VPZ5 1481 aa22.44■■□□□ 1.18
Pcdh1-203ENSMUST00000160721 Dcaf1Q80TR8 1506 aa22.42■■□□□ 1.18
Pcdh1-203ENSMUST00000160721 Rtl5Q5DTT4 599 aa22.42■■□□□ 1.18
Pcdh1-203ENSMUST00000160721 Kdm5dQ62240 1548 aa22.42■■□□□ 1.18
Pcdh1-203ENSMUST00000160721 Kif15Q6P9L6 1387 aa22.39■■□□□ 1.17
Pcdh1-203ENSMUST00000160721 Atp1b4Q99ME6 356 aa22.39■■□□□ 1.17
Pcdh1-203ENSMUST00000160721 Baz1aO88379 1555 aa22.33■■□□□ 1.17
Pcdh1-203ENSMUST00000160721 Zbtb4Q5F293 982 aa22.32■■□□□ 1.16
Pcdh1-203ENSMUST00000160721 Clip1Q922J3 1391 aa22.3■■□□□ 1.16
Pcdh1-203ENSMUST00000160721 Gm13695A2AK44 830 aa22.28■■□□□ 1.16
Pcdh1-203ENSMUST00000160721 DiexfQ8BTT6 772 aaKnown RBP22.28■■□□□ 1.16
Pcdh1-203ENSMUST00000160721 Rsf1E9PWW9 1441 aaKnown RBP22.28■■□□□ 1.16
Pcdh1-203ENSMUST00000160721 Gm38655A0A286YDK6 273 aa22.22■■□□□ 1.15
Pcdh1-203ENSMUST00000160721 Anp32aO35381 247 aa22.22■■□□□ 1.15
Pcdh1-203ENSMUST00000160721 ClspnQ80YR7 1315 aa22.22■■□□□ 1.15
Pcdh1-203ENSMUST00000160721 DaxxO35613 739 aa22.19■■□□□ 1.14
Pcdh1-203ENSMUST00000160721 Mapk8ip2Q9ERE9 830 aa22.13■■□□□ 1.13
Pcdh1-203ENSMUST00000160721 Safb2Q80YR5 991 aaKnown RBP22.09■■□□□ 1.13
Pcdh1-203ENSMUST00000160721 Prdm10Q3UTQ7 1184 aa22.09■■□□□ 1.13
Pcdh1-203ENSMUST00000160721 Cep164Q5DU05 1446 aa22.09■■□□□ 1.13
Pcdh1-203ENSMUST00000160721 Eid3Q3V124 375 aa22.08■■□□□ 1.12
Pcdh1-203ENSMUST00000160721 Chic2Q9D9G3 165 aa22.07■■□□□ 1.12
Pcdh1-203ENSMUST00000160721 Pds5bQ4VA53 1446 aaKnown RBP22.06■■□□□ 1.12
Pcdh1-203ENSMUST00000160721 Arhgap27A2AB59 869 aa22.04■■□□□ 1.12
Pcdh1-203ENSMUST00000160721 Ccdc18Q640L5 1455 aa22.03■■□□□ 1.12
Pcdh1-203ENSMUST00000160721 Csrnp3P59055 597 aa22.02■■□□□ 1.12
Pcdh1-203ENSMUST00000160721 Golga3P55937 1487 aa21.97■■□□□ 1.11
Pcdh1-203ENSMUST00000160721 Sall2Q9QX96 1004 aa21.95■■□□□ 1.1
Pcdh1-203ENSMUST00000160721 BlmO88700 1416 aa21.94■■□□□ 1.1
Pcdh1-203ENSMUST00000160721 Setd5Q5XJV7 1441 aa21.89■■□□□ 1.09
Pcdh1-203ENSMUST00000160721 ArxO35085 564 aa21.89■■□□□ 1.09
Pcdh1-203ENSMUST00000160721 Anks4bQ8K3X6 423 aa21.88■■□□□ 1.09
Pcdh1-203ENSMUST00000160721 Sycp2Q9CUU3 1500 aa21.85■■□□□ 1.09
Retrieved 100 of 22,080 RNA–protein pairs in 42.5 ms