RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Obox8V9GWY9 217 aa9.5□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Ighv5-9-1A0A0A6YVS4 126 aa9.49□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Gm10518F6UQQ9 182 aa9.49□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Q08AU9 97 aa9.49□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Prop1P97458 223 aa9.49□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 1500011B03RikQ3TTH7 73 aa9.49□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Ighv13-2A0A0A6YWN3 119 aa9.49□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 EnhoQ8K1D8 76 aa9.49□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Q9D131 166 aa9.49□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 1700010B08RikQ9DAI7 102 aa9.49□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Ighv1-74A0A0G2JGK2 117 aa9.49□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Ndufc1Q9CQY9 76 aa9.49□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Cfap126Q6P8X9 189 aa9.48□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Ighv8-5A0A0A6YY60 119 aa9.48□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Ube2bP63147 152 aa9.48□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Sslp1Q3UN54 99 aa9.48□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Serp2Q6TAW2 65 aa9.48□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Vpreb3D3Z6J4 130 aa9.48□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 A230072I06RikQ3UUJ8 172 aa9.48□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 SisF8VQM5 1818 aa9.48□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Timm17bQ9Z0V7 172 aa9.48□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Crip1P63254 77 aa9.47□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Crybg1A0A0G2JG52 2065 aa9.47□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Fam216bQ8CC14 138 aa9.47□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 4930546C10RikE9Q4Y3 121 aa9.47□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 P01750 117 aa9.47□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Igkv8-34A0A0G2JDU0 121 aa9.47□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Loxl1P97873 607 aa9.47□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Trav9n-2A0A0G2JDP3 113 aa9.46□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 1700084M14RikB1AT01 78 aa9.46□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Cela2aP05208 271 aa9.46□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 C1qcQ02105 246 aa9.46□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 P01753 117 aa9.46□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 B230359F08RikA0A0B4J1K3 109 aa9.46□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 IgipA0A1B0GR74 53 aa9.46□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Nop10Q9CQS2 64 aa9.46□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Mrps21P58059 87 aa9.45□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Trav13d-4A0A0G2JFX3 110 aa9.45□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Ighv3-6P18531 116 aa9.45□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Klk9Q32M27 251 aa9.45□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 9530003J23RikQ8BM26 151 aa9.45□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Igkv8-26A0A075B5N5 123 aa9.45□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 UrahQ9CRB3 118 aa9.45□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Mlst8Q9DCJ1 326 aa9.45□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 P01725 110 aa9.45□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Dand5Q76LW6 185 aa9.45□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Sh2d1aO88890 126 aa9.44□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 GrnP28798 589 aaKnown RBP9.44□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Prr15lQ8JZM2 100 aa9.44□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Rpl39lQ9CQD0 51 aa9.44□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 H2al1bA0A087WP11 105 aa9.44□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Snai3Q9QY31 287 aa9.44□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Igkv1-88A0A140T8N1 120 aa9.44□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Odf1Q61999 247 aa9.44□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Gm5468Q8C3D3 155 aa9.44□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Rpl18aP62717 176 aaKnown RBP9.43□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 4930535I16RikQ9CUI2 172 aa9.43□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Gm3618D3Z4P5 127 aa9.43□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Gm10542F6XDR3 90 aa9.43□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Mapk1ip1lQ8BH93 242 aa9.43□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 P04940 107 aa9.43□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 P04941 107 aa9.43□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Pde6gP09174 87 aa9.43□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Brwd1Q921C3 2304 aa9.43□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Defb26Q30KN7 186 aa9.42□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Gm8251F6VUT6 1994 aa9.42□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Casp8ap2Q9WUF3 1962 aa9.42□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Trav13-4-dv7A0A075B6C2 110 aa9.42□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Gm15217A2CG07 155 aa9.42□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 P18527 97 aa9.42□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 H2al1aQ5M8Q2 105 aa9.42□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 H2al1eQ810S6 105 aa9.42□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 1700074P13RikQ9D9G7 251 aa9.42□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Ighv1-4A0A075B5T4 117 aa9.41□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 P04942 107 aa9.41□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Cox7a1P56392 80 aa9.41□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Rnf152Q8BG47 203 aa9.4□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Fam110aQ8R184 296 aa9.4□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 P01728 117 aa9.4□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 H2al1kJ3QP08 105 aa9.4□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 LoxP28301 411 aa9.4□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Zmat4Q8BZ94 229 aa9.4□□□□□ -0.9
Pcdhac1-201ENSMUST00000007584 Klk5Q9D140 293 aa9.4□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 3110082J24RikF6Z6Z2 108 aa9.39□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Trav9-2A0A075B647 113 aa9.39□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Ighv1-12A0A0A6YXJ9 117 aa9.39□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Trav9-4A0A0B4J1K2 113 aa9.39□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 P01658 132 aa9.39□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Wipf1Q8K1I7 493 aa9.39□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Ighv1-52A0A0A6YXC3 117 aa9.39□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Spry2Q9QXV8 315 aa9.39□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Gm10553J3QPF1 123 aa9.39□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Ighv8-11A0A075B5X4 119 aa9.38□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Gm12253Q5NC48 229 aa9.38□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Gm21060J3KMU4 56 aa9.38□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Rnf138Q9CQE0 245 aaKnown RBP9.38□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Dock4P59764 1978 aa9.38□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Gm37389A0A0A6YW05 95 aa9.38□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Igkv4-92A0A0B4J1I2 117 aa9.38□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Ighv3-1A0A075B5S6 116 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 9.1 ms