RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Rhox8Q6VSS7 320 aa20.84■□□□□ 0.93
Pcdhac1-201ENSMUST00000007584 Rpgrip1Q9EPQ2 1331 aa20.37■□□□□ 0.85
Pcdhac1-201ENSMUST00000007584 Las1lA2BE28 776 aaKnown RBP20.06■□□□□ 0.8
Pcdhac1-201ENSMUST00000007584 Cngb1E1AZ71 1325 aa19.9■□□□□ 0.78
Pcdhac1-201ENSMUST00000007584 Ehmt2Q9Z148 1263 aaKnown RBP19.76■□□□□ 0.75
Pcdhac1-201ENSMUST00000007584 Pelp1Q9DBD5 1123 aaKnown RBP19.44■□□□□ 0.7
Pcdhac1-201ENSMUST00000007584 Wdr66E9Q743 1299 aa19.28■□□□□ 0.68
Pcdhac1-201ENSMUST00000007584 Amer1Q7TS75 1132 aa19.2■□□□□ 0.66
Pcdhac1-201ENSMUST00000007584 Zeb1Q64318 1117 aa19.15■□□□□ 0.66
Pcdhac1-201ENSMUST00000007584 CenpbP27790 599 aa19.1■□□□□ 0.65
Pcdhac1-201ENSMUST00000007584 Myt1Q8CFC2 1127 aa18.66■□□□□ 0.58
Pcdhac1-201ENSMUST00000007584 Acin1Q9JIX8 1338 aaKnown RBP18.62■□□□□ 0.57
Pcdhac1-201ENSMUST00000007584 Ttbk1Q6PCN3 1308 aa18.53■□□□□ 0.56
Pcdhac1-201ENSMUST00000007584 Pcgf6Q99NA9 353 aa18.41■□□□□ 0.54
Pcdhac1-201ENSMUST00000007584 Ube2uB1AUC4 352 aa18.4■□□□□ 0.54
Pcdhac1-201ENSMUST00000007584 Ccdc136Q3TVA9 1136 aa18.34■□□□□ 0.53
Pcdhac1-201ENSMUST00000007584 4930567H17RikQ3V0K5 233 aa18.34■□□□□ 0.53
Pcdhac1-201ENSMUST00000007584 Gab3Q8BSM5 595 aa18.33■□□□□ 0.53
Pcdhac1-201ENSMUST00000007584 DiexfQ8BTT6 772 aaKnown RBP18.3■□□□□ 0.52
Pcdhac1-201ENSMUST00000007584 NefmP08553 848 aa18.22■□□□□ 0.51
Pcdhac1-201ENSMUST00000007584 Cdk11bP24788 784 aaKnown RBP18.22■□□□□ 0.51
Pcdhac1-201ENSMUST00000007584 4933416C03RikQ3V063 378 aa18.22■□□□□ 0.51
Pcdhac1-201ENSMUST00000007584 Stra8P70278 393 aa18.18■□□□□ 0.5
Pcdhac1-201ENSMUST00000007584 Slc24a1Q91WD8 1130 aa18.17■□□□□ 0.5
Pcdhac1-201ENSMUST00000007584 Trim41Q5NCC3 630 aa18.05■□□□□ 0.48
Pcdhac1-201ENSMUST00000007584 Esf1Q3V1V3 845 aaKnown RBP17.97■□□□□ 0.47
Pcdhac1-201ENSMUST00000007584 Nop58Q6DFW4 536 aaKnown RBP17.96■□□□□ 0.46
Pcdhac1-201ENSMUST00000007584 Myt1lP97500 1187 aa17.91■□□□□ 0.46
Pcdhac1-201ENSMUST00000007584 UbtfP25976 765 aaKnown RBP17.91■□□□□ 0.46
Pcdhac1-201ENSMUST00000007584 Supt5hO55201 1082 aaKnown RBP17.91■□□□□ 0.46
Pcdhac1-201ENSMUST00000007584 Tnnt3Q9QZ47 272 aa17.9■□□□□ 0.46
Pcdhac1-201ENSMUST00000007584 Npm2Q80W85 207 aa17.86■□□□□ 0.45
Pcdhac1-201ENSMUST00000007584 Rtl5Q5DTT4 599 aa17.77■□□□□ 0.44
Pcdhac1-201ENSMUST00000007584 Ppargc1bQ8VHJ7 1014 aa17.77■□□□□ 0.43
Pcdhac1-201ENSMUST00000007584 HrcG5E8J6 738 aa17.76■□□□□ 0.43
Pcdhac1-201ENSMUST00000007584 Eif5bQ05D44 1216 aaKnown RBP17.67■□□□□ 0.42
Pcdhac1-201ENSMUST00000007584 NrdcQ8BHG1 1161 aa17.57■□□□□ 0.4
Pcdhac1-201ENSMUST00000007584 NeflP08551 543 aa17.54■□□□□ 0.4
Pcdhac1-201ENSMUST00000007584 Neurod1Q60867 357 aa17.51■□□□□ 0.39
Pcdhac1-201ENSMUST00000007584 DaxxO35613 739 aa17.49■□□□□ 0.39
Pcdhac1-201ENSMUST00000007584 Gm38655A0A286YDK6 273 aa17.47■□□□□ 0.39
Pcdhac1-201ENSMUST00000007584 Anp32aO35381 247 aa17.44■□□□□ 0.38
Pcdhac1-201ENSMUST00000007584 Csrnp3P59055 597 aa17.39■□□□□ 0.37
Pcdhac1-201ENSMUST00000007584 NclP09405 707 aaKnown RBP17.38■□□□□ 0.37
Pcdhac1-201ENSMUST00000007584 Anp32bQ9EST5 272 aaKnown RBP17.3■□□□□ 0.36
Pcdhac1-201ENSMUST00000007584 TonslQ6NZL6 1363 aa17.24■□□□□ 0.35
Pcdhac1-201ENSMUST00000007584 Aplp2Q06335 707 aa17.23■□□□□ 0.35
Pcdhac1-201ENSMUST00000007584 Anks4bQ8K3X6 423 aa17.23■□□□□ 0.35
Pcdhac1-201ENSMUST00000007584 Fam50aQ9WV03 339 aaKnown RBP17.14■□□□□ 0.33
Pcdhac1-201ENSMUST00000007584 Mier1Q5UAK0 511 aa17.13■□□□□ 0.33
Pcdhac1-201ENSMUST00000007584 ClspnQ80YR7 1315 aa17.12■□□□□ 0.33
Pcdhac1-201ENSMUST00000007584 Ccdc180J3QNE4 1664 aa17.08■□□□□ 0.33
Pcdhac1-201ENSMUST00000007584 Ythdc1E9Q5K9 736 aaKnown RBP17.03■□□□□ 0.32
Pcdhac1-201ENSMUST00000007584 Sall2Q9QX96 1004 aa17.02■□□□□ 0.32
Pcdhac1-201ENSMUST00000007584 1700123L14RikQ3V2K7 440 aa16.97■□□□□ 0.31
Pcdhac1-201ENSMUST00000007584 Bcl11aQ9QYE3 773 aa16.94■□□□□ 0.3
Pcdhac1-201ENSMUST00000007584 Ap3b1Q9Z1T1 1105 aa16.93■□□□□ 0.3
Pcdhac1-201ENSMUST00000007584 ArxO35085 564 aa16.92■□□□□ 0.3
Pcdhac1-201ENSMUST00000007584 Mapk8ip2Q9ERE9 830 aa16.91■□□□□ 0.3
Pcdhac1-201ENSMUST00000007584 Lmod3E9QA62 571 aa16.88■□□□□ 0.29
Pcdhac1-201ENSMUST00000007584 Ppp4r2Q0VGB7 417 aa16.87■□□□□ 0.29
Pcdhac1-201ENSMUST00000007584 Ccdc9Q8VC31 543 aaKnown RBP16.84■□□□□ 0.29
Pcdhac1-201ENSMUST00000007584 CatipB9EKE5 520 aa16.84■□□□□ 0.29
Pcdhac1-201ENSMUST00000007584 Hsp90aa1P07901 733 aaKnown RBP16.84■□□□□ 0.29
Pcdhac1-201ENSMUST00000007584 Calr4Q3TQS0 420 aa16.82■□□□□ 0.28
Pcdhac1-201ENSMUST00000007584 Os9Q8K2C7 672 aa16.81■□□□□ 0.28
Pcdhac1-201ENSMUST00000007584 Fam71e1A1L3C1 212 aa16.8■□□□□ 0.28
Pcdhac1-201ENSMUST00000007584 Il27Q8K3I6 234 aa16.74■□□□□ 0.27
Pcdhac1-201ENSMUST00000007584 Wdr43Q6ZQL4 677 aaKnown RBP16.69■□□□□ 0.26
Pcdhac1-201ENSMUST00000007584 Upf2A2AT37 1269 aaKnown RBP16.68■□□□□ 0.26
Pcdhac1-201ENSMUST00000007584 Eid3Q3V124 375 aa16.57■□□□□ 0.24
Pcdhac1-201ENSMUST00000007584 NischQ80TM9 1593 aa16.57■□□□□ 0.24
Pcdhac1-201ENSMUST00000007584 Polr3glQ8R0C0 218 aa16.56■□□□□ 0.24
Pcdhac1-201ENSMUST00000007584 Trim44Q9QXA7 346 aa16.55■□□□□ 0.24
Pcdhac1-201ENSMUST00000007584 Ccdc27Q3V036 639 aa16.51■□□□□ 0.23
Pcdhac1-201ENSMUST00000007584 Vsig10D3YX43 558 aa16.51■□□□□ 0.23
Pcdhac1-201ENSMUST00000007584 Plekhg3Q4VAC9 1341 aa16.5■□□□□ 0.23
Pcdhac1-201ENSMUST00000007584 Zbtb4Q5F293 982 aa16.5■□□□□ 0.23
Pcdhac1-201ENSMUST00000007584 Rtl1Q7M732 1744 aa16.5■□□□□ 0.23
Pcdhac1-201ENSMUST00000007584 DekQ7TNV0 380 aaKnown RBP16.5■□□□□ 0.23
Pcdhac1-201ENSMUST00000007584 Irx3P81067 507 aa16.48■□□□□ 0.23
Pcdhac1-201ENSMUST00000007584 CanxP35564 591 aaKnown RBP16.47■□□□□ 0.23
Pcdhac1-201ENSMUST00000007584 Nlrp6Q91WS2 869 aa16.43■□□□□ 0.22
Pcdhac1-201ENSMUST00000007584 Zbtb7cQ8VCZ7 619 aa16.42■□□□□ 0.22
Pcdhac1-201ENSMUST00000007584 Lmod2Q3UHZ5 550 aa16.39■□□□□ 0.21
Pcdhac1-201ENSMUST00000007584 Prdm10Q3UTQ7 1184 aa16.36■□□□□ 0.21
Pcdhac1-201ENSMUST00000007584 Mrs2Q5NCE8 434 aa16.34■□□□□ 0.21
Pcdhac1-201ENSMUST00000007584 Rad21Q61550 635 aaKnown RBP16.33■□□□□ 0.2
Pcdhac1-201ENSMUST00000007584 Chic1Q8CBW7 227 aa16.33■□□□□ 0.2
Pcdhac1-201ENSMUST00000007584 Hsp90ab1P11499 724 aaKnown RBP16.28■□□□□ 0.2
Pcdhac1-201ENSMUST00000007584 Rangap1P46061 589 aaKnown RBP16.28■□□□□ 0.2
Pcdhac1-201ENSMUST00000007584 SafbD3YXK2 937 aaKnown RBP16.28■□□□□ 0.2
Pcdhac1-201ENSMUST00000007584 Dcaf1Q80TR8 1506 aa16.26■□□□□ 0.19
Pcdhac1-201ENSMUST00000007584 Trim30dE9PWL0 497 aa16.26■□□□□ 0.19
Pcdhac1-201ENSMUST00000007584 Tnnt2P50752 301 aa16.25■□□□□ 0.19
Pcdhac1-201ENSMUST00000007584 PtmaP26350 111 aa16.24■□□□□ 0.19
Pcdhac1-201ENSMUST00000007584 Aebp2Q9Z248 504 aaKnown RBP16.24■□□□□ 0.19
Pcdhac1-201ENSMUST00000007584 Hnrnpul2Q00PI9 745 aaKnown RBP16.23■□□□□ 0.19
Pcdhac1-201ENSMUST00000007584 Taok2Q6ZQ29 1240 aa16.23■□□□□ 0.19
Pcdhac1-201ENSMUST00000007584 P3h3Q8CG70 732 aa16.22■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms