RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Ighv3-3A0A0A6YWL2 116 aa11.81□□□□□ -0.52
Trim39-203ENSMUST00000113706 Psmb8P28063 276 aa11.81□□□□□ -0.52
Trim39-203ENSMUST00000113706 Q3UNZ8 350 aa11.81□□□□□ -0.52
Trim39-203ENSMUST00000113706 H2al2bA9Z055 111 aa11.81□□□□□ -0.52
Trim39-203ENSMUST00000113706 P01747 120 aa11.81□□□□□ -0.52
Trim39-203ENSMUST00000113706 Ighv8-8A0A0A6YXQ0 119 aa11.81□□□□□ -0.52
Trim39-203ENSMUST00000113706 Runx1Q03347 451 aa11.81□□□□□ -0.52
Trim39-203ENSMUST00000113706 Ndufb4Q9CQC7 129 aa11.81□□□□□ -0.52
Trim39-203ENSMUST00000113706 Fam216aQ9DB54 251 aa11.81□□□□□ -0.52
Trim39-203ENSMUST00000113706 Lamtor2Q9JHS3 125 aa11.81□□□□□ -0.52
Trim39-203ENSMUST00000113706 Igkv4-62A0A0G2JDW9 117 aa11.8□□□□□ -0.52
Trim39-203ENSMUST00000113706 Ca1P13634 261 aa11.8□□□□□ -0.52
Trim39-203ENSMUST00000113706 Tex26Q0VB26 296 aa11.8□□□□□ -0.52
Trim39-203ENSMUST00000113706 Gm6040Q4QY32 63 aa11.8□□□□□ -0.52
Trim39-203ENSMUST00000113706 MycbQ6P8Z1 170 aa11.8□□□□□ -0.52
Trim39-203ENSMUST00000113706 Avpi1Q9D7H4 142 aa11.8□□□□□ -0.52
Trim39-203ENSMUST00000113706 Gm17359A0A0G2JEB7 487 aa11.8□□□□□ -0.52
Trim39-203ENSMUST00000113706 P06330 118 aa11.8□□□□□ -0.52
Trim39-203ENSMUST00000113706 Tmem136Q3TYE7 245 aa11.8□□□□□ -0.52
Trim39-203ENSMUST00000113706 Pmis2Q497Q9 96 aa11.8□□□□□ -0.52
Trim39-203ENSMUST00000113706 Ighv5-9-1A0A0A6YVS4 126 aa11.79□□□□□ -0.52
Trim39-203ENSMUST00000113706 1810032O08RikE9PZV8 113 aa11.79□□□□□ -0.52
Trim39-203ENSMUST00000113706 Vsig4F6TUL9 280 aa11.79□□□□□ -0.52
Trim39-203ENSMUST00000113706 P0C913 63 aa11.79□□□□□ -0.52
Trim39-203ENSMUST00000113706 Cd99Q8VCN6 175 aa11.79□□□□□ -0.52
Trim39-203ENSMUST00000113706 Mrpl36Q99N90 102 aa11.79□□□□□ -0.52
Trim39-203ENSMUST00000113706 Psmg4P0C7N9 123 aa11.79□□□□□ -0.52
Trim39-203ENSMUST00000113706 Khdc1cQ4KL78 166 aa11.79□□□□□ -0.52
Trim39-203ENSMUST00000113706 Trappc1Q5NCF2 145 aa11.79□□□□□ -0.52
Trim39-203ENSMUST00000113706 Cd33Q63994 403 aa11.79□□□□□ -0.52
Trim39-203ENSMUST00000113706 Gkn1Q9CR36 201 aa11.79□□□□□ -0.52
Trim39-203ENSMUST00000113706 Snai3Q9QY31 287 aa11.78□□□□□ -0.52
Trim39-203ENSMUST00000113706 Tmem14cQ9CQN6 114 aa11.78□□□□□ -0.52
Trim39-203ENSMUST00000113706 S100a4P07091 101 aa11.77□□□□□ -0.52
Trim39-203ENSMUST00000113706 OtorQ9JIE3 128 aa11.77□□□□□ -0.52
Trim39-203ENSMUST00000113706 Reg3gO09049 174 aa11.77□□□□□ -0.53
Trim39-203ENSMUST00000113706 Thy1P01831 162 aa11.77□□□□□ -0.53
Trim39-203ENSMUST00000113706 Gm16223Q8CBM3 117 aa11.77□□□□□ -0.53
Trim39-203ENSMUST00000113706 TctaQ8VEA7 122 aa11.77□□□□□ -0.53
Trim39-203ENSMUST00000113706 Sertad4A7DTG3 377 aa11.76□□□□□ -0.53
Trim39-203ENSMUST00000113706 Nat8f4G5E8L3 226 aa11.76□□□□□ -0.53
Trim39-203ENSMUST00000113706 P06328 117 aa11.76□□□□□ -0.53
Trim39-203ENSMUST00000113706 MdfiP70331 251 aa11.76□□□□□ -0.53
Trim39-203ENSMUST00000113706 Olfr498Q8VEW2 330 aa11.76□□□□□ -0.53
Trim39-203ENSMUST00000113706 Vps25Q9CQ80 176 aa11.76□□□□□ -0.53
Trim39-203ENSMUST00000113706 4930564D02RikQ9D4S4 103 aa11.76□□□□□ -0.53
Trim39-203ENSMUST00000113706 Trdv2-1A0A0G2JGB9 116 aa11.75□□□□□ -0.53
Trim39-203ENSMUST00000113706 PlnP61014 52 aa11.75□□□□□ -0.53
Trim39-203ENSMUST00000113706 Il22ra1Q80XZ4 581 aa11.75□□□□□ -0.53
Trim39-203ENSMUST00000113706 Trbv14A0A140T8L9 115 aa11.75□□□□□ -0.53
Trim39-203ENSMUST00000113706 Gm3443F7CCV5 94 aa11.75□□□□□ -0.53
Trim39-203ENSMUST00000113706 CrxO54751 299 aa11.75□□□□□ -0.53
Trim39-203ENSMUST00000113706 Klk1b4P00757 256 aa11.75□□□□□ -0.53
Trim39-203ENSMUST00000113706 Tcl1b4P56844 120 aa11.75□□□□□ -0.53
Trim39-203ENSMUST00000113706 Fxyd7P59648 80 aa11.75□□□□□ -0.53
Trim39-203ENSMUST00000113706 Olfr322Q5NCC8 327 aa11.75□□□□□ -0.53
Trim39-203ENSMUST00000113706 Wnk1P83741 2377 aa11.75□□□□□ -0.53
Trim39-203ENSMUST00000113706 Igkv4-74A0A0B4J1I3 119 aa11.74□□□□□ -0.53
Trim39-203ENSMUST00000113706 Tspo2Q9CRZ8 162 aa11.74□□□□□ -0.53
Trim39-203ENSMUST00000113706 Ighv1-63A0A075B5X2 117 aa11.74□□□□□ -0.53
Trim39-203ENSMUST00000113706 Cdx4Q07424 282 aa11.74□□□□□ -0.53
Trim39-203ENSMUST00000113706 Olfr1367Q8VFG2 316 aa11.74□□□□□ -0.53
Trim39-203ENSMUST00000113706 Tctex1d2Q9CQ66 144 aa11.74□□□□□ -0.53
Trim39-203ENSMUST00000113706 Gm29666A0A087WQ99 126 aa11.73□□□□□ -0.53
Trim39-203ENSMUST00000113706 Defa35E9QLQ1 93 aa11.73□□□□□ -0.53
Trim39-203ENSMUST00000113706 Gng4P50153 75 aa11.73□□□□□ -0.53
Trim39-203ENSMUST00000113706 Smim15Q3UTD9 74 aa11.73□□□□□ -0.53
Trim39-203ENSMUST00000113706 Gm3250E9Q1M3 230 aa11.73□□□□□ -0.53
Trim39-203ENSMUST00000113706 Mrps12O35680 139 aa11.73□□□□□ -0.53
Trim39-203ENSMUST00000113706 Trbv30A0A0B4J1P1 111 aa11.72□□□□□ -0.53
Trim39-203ENSMUST00000113706 Gm2564F6Z9S8 108 aa11.72□□□□□ -0.53
Trim39-203ENSMUST00000113706 Ccl19O70460 108 aa11.72□□□□□ -0.53
Trim39-203ENSMUST00000113706 AI854703Q8BIN3 203 aa11.72□□□□□ -0.53
Trim39-203ENSMUST00000113706 Setd2E9Q5F9 2537 aa11.72□□□□□ -0.53
Trim39-203ENSMUST00000113706 Prr3Q811B5 190 aaKnown RBP11.72□□□□□ -0.53
Trim39-203ENSMUST00000113706 Ighv6-7A0A0A6YWU3 119 aa11.71□□□□□ -0.53
Trim39-203ENSMUST00000113706 Gm9767G3X930 207 aa11.71□□□□□ -0.53
Trim39-203ENSMUST00000113706 Gm10604Q3V0X7 143 aa11.71□□□□□ -0.53
Trim39-203ENSMUST00000113706 Helz2E9QAM5 2947 aaKnown RBP11.71□□□□□ -0.53
Trim39-203ENSMUST00000113706 AponG3X9D6 251 aa11.71□□□□□ -0.53
Trim39-203ENSMUST00000113706 Ndufa4Q62425 82 aaKnown RBP11.71□□□□□ -0.53
Trim39-203ENSMUST00000113706 Rnf152Q8BG47 203 aa11.71□□□□□ -0.53
Trim39-203ENSMUST00000113706 Hspb8Q9JK92 196 aa11.71□□□□□ -0.53
Trim39-203ENSMUST00000113706 Gphb5Q812B2 130 aa11.71□□□□□ -0.54
Trim39-203ENSMUST00000113706 EsdQ9R0P3 282 aa11.71□□□□□ -0.54
Trim39-203ENSMUST00000113706 Gm765B2RVL9 189 aa11.7□□□□□ -0.54
Trim39-203ENSMUST00000113706 P06334 169 aa11.7□□□□□ -0.54
Trim39-203ENSMUST00000113706 Sumo2P61957 95 aaKnown RBP11.7□□□□□ -0.54
Trim39-203ENSMUST00000113706 Clec5aQ9R007 190 aa11.7□□□□□ -0.54
Trim39-203ENSMUST00000113706 Ammecr1lQ8JZZ6 310 aa11.7□□□□□ -0.54
Trim39-203ENSMUST00000113706 AY761184Q9D848 116 aa11.7□□□□□ -0.54
Trim39-203ENSMUST00000113706 SbsponQ3UPR9 264 aa11.69□□□□□ -0.54
Trim39-203ENSMUST00000113706 Ndufc2Q9CQ54 120 aa11.69□□□□□ -0.54
Trim39-203ENSMUST00000113706 Synj2bpQ9D6K5 145 aa11.69□□□□□ -0.54
Trim39-203ENSMUST00000113706 Cphx2Q8BX39 182 aa11.69□□□□□ -0.54
Trim39-203ENSMUST00000113706 Defa22Q8C1N8 93 aa11.68□□□□□ -0.54
Trim39-203ENSMUST00000113706 Akap13E9Q394 2776 aa11.68□□□□□ -0.54
Trim39-203ENSMUST00000113706 Gm45521A0A1B0GRK0 198 aa11.68□□□□□ -0.54
Trim39-203ENSMUST00000113706 Foxi1Q922I5 372 aa11.68□□□□□ -0.54
Trim39-203ENSMUST00000113706 Ighv1-66A0A075B5X5 117 aa11.67□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 71.4 ms