RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Dock9Q8BIK4 2055 aa10.9□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Trav9d-3A0A075B695 113 aa10.9□□□□□ -0.67
Col3a1-201ENSMUST00000087883 P01630 113 aa10.89□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Prh1P05142 261 aa10.89□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Nbl1Q61477 178 aa10.89□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Tm2d1Q99MB3 208 aa10.89□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Tax1bp3Q9DBG9 124 aa10.89□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Trav7-6A0A075B640 112 aa10.89□□□□□ -0.67
Col3a1-201ENSMUST00000087883 NpyP57774 97 aa10.89□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Ncor2Q9WU42 2472 aaKnown RBP10.89□□□□□ -0.67
Col3a1-201ENSMUST00000087883 AtrxQ61687 2476 aaKnown RBP10.89□□□□□ -0.67
Col3a1-201ENSMUST00000087883 GfyJ3KML8 504 aa10.89□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Trav9-2A0A075B647 113 aa10.88□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Trav9-4A0A0B4J1K2 113 aa10.88□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Trav9n-2A0A0G2JDP3 113 aa10.88□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Fancd2osQ9D4K4 178 aa10.88□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Pcdh15Q99PJ1 1943 aa10.88□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Smim20D3Z7Q2 69 aa10.88□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Gm17324Q8C6J8 137 aa10.88□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Gtf3c1Q8K284 2101 aa10.88□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Trav4d-3A0A075B625 110 aa10.87□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Gm10553J3QPF1 123 aa10.87□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Ndufa1O35683 70 aa10.87□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Rpl39P62892 51 aa10.87□□□□□ -0.67
Col3a1-201ENSMUST00000087883 7420426K07RikQ3UX66 186 aa10.87□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Gm10251J3QPM5 127 aa10.87□□□□□ -0.67
Col3a1-201ENSMUST00000087883 AngP21570 145 aa10.87□□□□□ -0.67
Col3a1-201ENSMUST00000087883 1500011B03RikQ3TTH7 73 aa10.87□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Gm10295Q8CCF3 114 aa10.87□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Gm2916Q9D9B9 127 aa10.87□□□□□ -0.67
Col3a1-201ENSMUST00000087883 CrebbpP45481 2441 aa10.87□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Erdr1J3QMM0 206 aa10.87□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Znf672Q99LH4 468 aa10.87□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Plxna4Q80UG2 1893 aa10.86□□□□□ -0.67
Col3a1-201ENSMUST00000087883 P04942 107 aa10.86□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Trav11A0A0B4J1J9 114 aa10.86□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Ighv1-52A0A0A6YXC3 117 aa10.86□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Gm37988J3QM41 62 aa10.86□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Mrpl35Q9CQL6 188 aa10.86□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Klk11Q9QYN3 276 aa10.86□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Cep295Q8BQ48 2412 aa10.85□□□□□ -0.67
Col3a1-201ENSMUST00000087883 P01753 117 aa10.85□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Atg2aQ6P4T0 1914 aa10.85□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Egr2P08152 470 aa10.85□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Timm17aQ9Z0V8 171 aa10.85□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Trav13n-1A0A0G2JEU8 110 aa10.85□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Spata25Q9DA57 226 aa10.85□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Dock7Q8R1A4 2130 aaKnown RBP10.85□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Tln2Q71LX4 2375 aa10.85□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Ube2bP63147 152 aa10.85□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Ccl24Q9JKC0 119 aa10.85□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Gm17472A0A075B683 117 aa10.84□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Gm21994F6T2D2 329 aa10.84□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Vsig4F6TUL9 280 aa10.84□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Fam19a4Q7TPG5 135 aa10.84□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Ang3P97802 145 aa10.84□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Bub3Q9WVA3 326 aa10.84□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Ighv1-12A0A0A6YXJ9 117 aa10.84□□□□□ -0.67
Col3a1-201ENSMUST00000087883 Lyrm9Q3UN90 78 aa10.83□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Odf1Q61999 247 aa10.83□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Abca1P41233 2261 aa10.83□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Sptbn1Q62261 2363 aaKnown RBP10.83□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Trav4-3A0A0B4J1K1 110 aa10.83□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Adamts9E9PUN6 1931 aa10.83□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Bdp1Q571C7 2467 aa10.83□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Asxl3Q8C4A5 2259 aa10.83□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Atp5eP56382 52 aa10.83□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Ndufb4Q9CQC7 129 aa10.83□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Trav13d-1A0A075B606 110 aa10.82□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Gm42674D3YUT9 64 aa10.82□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Atp6v0e2Q91XE7 81 aa10.82□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Rp1P56716 2095 aa10.82□□□□□ -0.68
Col3a1-201ENSMUST00000087883 SvipQ3UZP4 77 aa10.82□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Gm4861Q8C5A4 106 aa10.82□□□□□ -0.68
Col3a1-201ENSMUST00000087883 MylkQ6PDN3 1941 aaKnown RBP10.82□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Igkv8-26A0A075B5N5 123 aa10.82□□□□□ -0.68
Col3a1-201ENSMUST00000087883 P0C913 63 aa10.82□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Cryba4Q9JJV0 196 aa10.82□□□□□ -0.68
Col3a1-201ENSMUST00000087883 BikO70337 150 aa10.81□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Cfap126Q6P8X9 189 aa10.81□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Wfdc15bQ9JHY4 80 aa10.81□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Gm17359A0A0G2JEB7 487 aa10.81□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Defb12Q8K4N3 78 aa10.81□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Gm10518F6UQQ9 182 aa10.81□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Cox7a1P56392 80 aa10.81□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Trav13d-4A0A0G2JFX3 110 aa10.81□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Cacna1eQ61290 2272 aa10.8□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Gata3P23772 443 aa10.8□□□□□ -0.68
Col3a1-201ENSMUST00000087883 9230109A22RikQ8BHE6 111 aa10.8□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Greb1Q3UHK3 1954 aa10.8□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Cep250Q60952 2414 aa10.8□□□□□ -0.68
Col3a1-201ENSMUST00000087883 9930022D16RikQ8BG27 128 aa10.8□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Gm9949Q8C9F4 104 aa10.8□□□□□ -0.68
Col3a1-201ENSMUST00000087883 UrahQ9CRB3 118 aa10.79□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Igkv2-109A0A075B5K6 120 aa10.79□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Tm2d2Q8R0I4 213 aa10.79□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Igkv1-35A0A0G2JDE5 120 aa10.79□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Spink4O35679 86 aa10.79□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Pglyrp1O88593 182 aa10.79□□□□□ -0.68
Col3a1-201ENSMUST00000087883 CrygdP04342 174 aa10.79□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 126.8 ms