RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Gm12057A0A087WR21 115 aa11.38□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Med13Q5SWW4 2171 aa11.37□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Egr2P08152 470 aa11.37□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 BC048562Q80ZQ7 204 aa11.37□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 1700010B08RikQ9DAI7 102 aa11.37□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Gata1P17679 413 aa11.37□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Q9DAQ5 155 aa11.37□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Reg3dQ9QUS9 175 aa11.37□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Ighv1-52A0A0A6YXC3 117 aa11.36□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Gm7075D3Z497 112 aa11.36□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 3110021N24RikJ3QMN2 152 aa11.36□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 MifP34884 115 aaKnown RBP11.36□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Lyzl4Q9D925 145 aa11.36□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 E130218I03RikA0A0U1RNU5 63 aa11.36□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Gm2564F6Z9S8 108 aa11.36□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 P01738 130 aa11.36□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Heatr1G3X9B1 2143 aaKnown RBP11.36□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 P06330 118 aa11.36□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Vmo1Q5SXG7 201 aa11.36□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Crip1P63254 77 aa11.36□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Synj2bpQ9D6K5 145 aa11.36□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Gm44965A0A0N4SVR3 59 aa11.35□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 P04219 140 aa11.35□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Gata3P23772 443 aa11.35□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Gm815Q3UWS2 115 aa11.35□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Ndufa4l2Q4FZG9 87 aa11.35□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Igkv4-61A0A0G2JH00 117 aa11.35□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Ndufc1Q9CQY9 76 aa11.35□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Trbv16A0A0B4J1H3 115 aa11.34□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 P01786 117 aa11.34□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 MyofQ69ZN7 2048 aaKnown RBP11.34□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Gm20708H3BKF4 155 aa11.34□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Vwa8Q8CC88 1905 aa11.34□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Ighv1-4A0A075B5T4 117 aa11.34□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Cfap126Q6P8X9 189 aa11.34□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Gm12253Q5NC48 229 aa11.33□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Tmem263Q9DAM7 115 aa11.33□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 P01659 112 aa11.33□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Igkv4-59A0A0B4J1I8 117 aa11.33□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Vpreb1P13372 142 aa11.33□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Arhgap21Q6DFV3 1944 aa11.33□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Lypd6Q8BPP5 171 aa11.33□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Dazap2Q9DCP9 168 aa11.33□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Igkv4-54A0A0G2JES9 117 aa11.32□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Adamts9E9PUN6 1931 aa11.32□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Gm1968Q3T9I3 115 aa11.32□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Ube2e2Q91W82 201 aa11.32□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Triap1Q9D8Z2 76 aa11.32□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Col5a3Q9JLI2 1739 aa11.32□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Ighv12-3A0A075B5T1 117 aa11.32□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Gm20481G3UXK4 153 aa11.32□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 LoxP28301 411 aa11.32□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Rpl39P62892 51 aa11.32□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Gm9747Q810H1 104 aa11.32□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Bub3Q9WVA3 326 aa11.32□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Igkv3-9A0A140T8P4 119 aa11.32□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Gm15091B1AZM2 449 aa11.32□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Nbl1Q61477 178 aa11.32□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Q9D131 166 aa11.32□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 P01750 117 aa11.32□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Gata4Q08369 441 aa11.32□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Sox16Q62247 57 aa11.32□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Nckap5E9QAE1 1909 aa11.31□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Gm9513B3GLJ6 99 aa11.31□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 CenpwQ3URR0 86 aa11.31□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Igkv8-16A0A0G2JDG9 121 aa11.31□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Prr14lE9Q7C4 1971 aa11.31□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Gm15217A2CG07 155 aa11.3□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Wdr38Q9D994 303 aa11.3□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Smim10l1A0A087WNQ7 89 aa11.3□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Fam19a4Q7TPG5 135 aa11.3□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Ormdl1Q921I0 153 aa11.3□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Fam222aQ6PGH4 453 aa11.3□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Igkv4-72A0A0B4J1I4 117 aa11.29□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Hoxb4P10284 250 aa11.29□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Ang3P97802 145 aa11.29□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 BikO70337 150 aa11.29□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Cd27P41272 250 aa11.29□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Chchd5Q9CQP3 110 aa11.29□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 FancmQ8BGE5 2021 aa11.29□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 9430069I07RikQ9CX21 111 aa11.28□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Dock9Q8BIK4 2055 aa11.28□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Igkv3-1A0A075B5P1 119 aa11.27□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Igkv4-69A0A0B4J1I6 116 aa11.27□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 E030018B13RikJ3QMS9 113 aa11.27□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 P01748 117 aa11.27□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Smim1P0C8K7 78 aa11.27□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Lyrm9Q3UN90 78 aa11.27□□□□□ -0.6
Pcdha1-201ENSMUST00000070797 Igkv4-57A0A0A6YYE7 117 aa11.27□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Ighv3-4A0A0A6YXF1 117 aa11.27□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 9230109A22RikQ8BHE6 111 aa11.27□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Pde6gP09174 87 aa11.27□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Fxyd5P97808 178 aa11.26□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Smrp1Q2MH31 260 aa11.26□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Trbv13-1A0A0B4J1P8 112 aa11.26□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Gm10337F7DEP7 55 aa11.26□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Dand5Q76LW6 185 aa11.26□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Med12lQ8BQM9 2157 aa11.26□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Cox6b1P56391 86 aaKnown RBP11.25□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Gm17324Q8C6J8 137 aa11.25□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms