RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 SbsponQ3UPR9 264 aa9.35□□□□□ -0.91
Trim23-201ENSMUST00000022225 Zfp248Q640N4 576 aa9.35□□□□□ -0.91
Trim23-201ENSMUST00000022225 Ighv1-53A0A075B5W3 117 aa9.35□□□□□ -0.91
Trim23-201ENSMUST00000022225 Trav7n-5A0A075B604 112 aa9.35□□□□□ -0.91
Trim23-201ENSMUST00000022225 Ifitm10Q8BR26 201 aa9.35□□□□□ -0.91
Trim23-201ENSMUST00000022225 Bub3Q9WVA3 326 aa9.35□□□□□ -0.91
Trim23-201ENSMUST00000022225 P01726 129 aa9.35□□□□□ -0.91
Trim23-201ENSMUST00000022225 Tex26Q0VB26 296 aa9.35□□□□□ -0.91
Trim23-201ENSMUST00000022225 BC025920Q3US60 128 aa9.35□□□□□ -0.91
Trim23-201ENSMUST00000022225 Mrpl16Q99N93 251 aa9.35□□□□□ -0.91
Trim23-201ENSMUST00000022225 B1ARW8 110 aa9.34□□□□□ -0.91
Trim23-201ENSMUST00000022225 P01783 136 aa9.34□□□□□ -0.91
Trim23-201ENSMUST00000022225 Ros1Q78DX7 2340 aa9.34□□□□□ -0.91
Trim23-201ENSMUST00000022225 Gm2564F6Z9S8 108 aa9.34□□□□□ -0.91
Trim23-201ENSMUST00000022225 Lrcol1Q3URS3 161 aa9.34□□□□□ -0.91
Trim23-201ENSMUST00000022225 Rasl11bQ922H7 247 aa9.34□□□□□ -0.91
Trim23-201ENSMUST00000022225 Igkv4-90A0A075B5L3 117 aa9.34□□□□□ -0.91
Trim23-201ENSMUST00000022225 Ighv1-80A0A075B5Y3 117 aa9.34□□□□□ -0.91
Trim23-201ENSMUST00000022225 Hoxd3P09027 433 aa9.34□□□□□ -0.91
Trim23-201ENSMUST00000022225 Trav21-dv12A0A075B6C4 109 aa9.33□□□□□ -0.92
Trim23-201ENSMUST00000022225 Ighv3-4A0A0A6YXF1 117 aa9.33□□□□□ -0.92
Trim23-201ENSMUST00000022225 P18532 116 aa9.33□□□□□ -0.92
Trim23-201ENSMUST00000022225 ScxQ64124 207 aa9.33□□□□□ -0.92
Trim23-201ENSMUST00000022225 Mrpl36Q99N90 102 aa9.33□□□□□ -0.92
Trim23-201ENSMUST00000022225 TprF6ZDS4 2431 aaKnown RBP9.33□□□□□ -0.92
Trim23-201ENSMUST00000022225 Ighv4-1A0A075B5R5 116 aa9.33□□□□□ -0.92
Trim23-201ENSMUST00000022225 Trav4d-3A0A075B625 110 aa9.33□□□□□ -0.92
Trim23-201ENSMUST00000022225 S100a4P07091 101 aa9.33□□□□□ -0.92
Trim23-201ENSMUST00000022225 Rpl39P62892 51 aa9.33□□□□□ -0.92
Trim23-201ENSMUST00000022225 A130051J06RikQ8CAU1 227 aa9.33□□□□□ -0.92
Trim23-201ENSMUST00000022225 Mrps12O35680 139 aa9.32□□□□□ -0.92
Trim23-201ENSMUST00000022225 Defa2P28309 93 aa9.32□□□□□ -0.92
Trim23-201ENSMUST00000022225 Il19Q8CJ70 176 aa9.32□□□□□ -0.92
Trim23-201ENSMUST00000022225 GalmQ8K157 342 aa9.32□□□□□ -0.92
Trim23-201ENSMUST00000022225 Gm10271F6WY25 52 aa9.32□□□□□ -0.92
Trim23-201ENSMUST00000022225 Ly86O88188 162 aa9.32□□□□□ -0.92
Trim23-201ENSMUST00000022225 Fhl1P97447 280 aaKnown RBP9.32□□□□□ -0.92
Trim23-201ENSMUST00000022225 Zc2hc1bQ9D534 172 aa9.32□□□□□ -0.92
Trim23-201ENSMUST00000022225 Hcfc1Q61191 2045 aaKnown RBP9.32□□□□□ -0.92
Trim23-201ENSMUST00000022225 Ighv1-31A0A0A6YWK5 117 aa9.31□□□□□ -0.92
Trim23-201ENSMUST00000022225 Gm35549A0A0N4SUS7 141 aa9.31□□□□□ -0.92
Trim23-201ENSMUST00000022225 Gm6793B2RXM2 351 aa9.31□□□□□ -0.92
Trim23-201ENSMUST00000022225 Q5BN45 167 aa9.31□□□□□ -0.92
Trim23-201ENSMUST00000022225 BC106179Q8C9L1 186 aa9.31□□□□□ -0.92
Trim23-201ENSMUST00000022225 Ndufa3Q9CQ91 84 aa9.31□□□□□ -0.92
Trim23-201ENSMUST00000022225 TectaO08523 2155 aa9.31□□□□□ -0.92
Trim23-201ENSMUST00000022225 Trav7-6A0A075B640 112 aa9.31□□□□□ -0.92
Trim23-201ENSMUST00000022225 Smim10l1A0A087WNQ7 89 aa9.31□□□□□ -0.92
Trim23-201ENSMUST00000022225 Ighv1-52A0A0A6YXC3 117 aa9.31□□□□□ -0.92
Trim23-201ENSMUST00000022225 P01811 117 aa9.31□□□□□ -0.92
Trim23-201ENSMUST00000022225 Gm10767Q3TQP0 103 aa9.31□□□□□ -0.92
Trim23-201ENSMUST00000022225 Gm21748Q3UE70 102 aa9.31□□□□□ -0.92
Trim23-201ENSMUST00000022225 Pear1Q8VIK5 1034 aa9.31□□□□□ -0.92
Trim23-201ENSMUST00000022225 Tmem101Q91VP7 257 aa9.31□□□□□ -0.92
Trim23-201ENSMUST00000022225 Cxcl13O55038 109 aa9.3□□□□□ -0.92
Trim23-201ENSMUST00000022225 Tmem95P0DJF3 176 aa9.3□□□□□ -0.92
Trim23-201ENSMUST00000022225 Gm9922Q8C3P1 144 aa9.3□□□□□ -0.92
Trim23-201ENSMUST00000022225 Rnf183Q8QZS5 190 aa9.3□□□□□ -0.92
Trim23-201ENSMUST00000022225 Trbv13-1A0A0B4J1P8 112 aa9.3□□□□□ -0.92
Trim23-201ENSMUST00000022225 TtrP07309 147 aa9.3□□□□□ -0.92
Trim23-201ENSMUST00000022225 Prok1Q14A28 105 aa9.3□□□□□ -0.92
Trim23-201ENSMUST00000022225 P01643 108 aa9.3□□□□□ -0.92
Trim23-201ENSMUST00000022225 Cd52Q64389 74 aa9.3□□□□□ -0.92
Trim23-201ENSMUST00000022225 Lect2O88803 151 aa9.29□□□□□ -0.92
Trim23-201ENSMUST00000022225 P01724 129 aa9.29□□□□□ -0.92
Trim23-201ENSMUST00000022225 P01727 129 aa9.29□□□□□ -0.92
Trim23-201ENSMUST00000022225 Defa1P11477 93 aa9.29□□□□□ -0.92
Trim23-201ENSMUST00000022225 CenpwQ3URR0 86 aa9.29□□□□□ -0.92
Trim23-201ENSMUST00000022225 Zfand3Q497H0 227 aa9.29□□□□□ -0.92
Trim23-201ENSMUST00000022225 Gm9936Q8C864 160 aa9.29□□□□□ -0.92
Trim23-201ENSMUST00000022225 Polr2kQ63871 58 aa9.29□□□□□ -0.92
Trim23-201ENSMUST00000022225 Mrpl35Q9CQL6 188 aa9.29□□□□□ -0.92
Trim23-201ENSMUST00000022225 Ccl19O70460 108 aa9.28□□□□□ -0.92
Trim23-201ENSMUST00000022225 Defa26Q3L180 93 aa9.28□□□□□ -0.92
Trim23-201ENSMUST00000022225 Arid1bE9Q4N7 2244 aa9.28□□□□□ -0.92
Trim23-201ENSMUST00000022225 Ighv1-5A0A0A6YWG2 117 aa9.28□□□□□ -0.92
Trim23-201ENSMUST00000022225 Cd59aO55186 123 aa9.28□□□□□ -0.92
Trim23-201ENSMUST00000022225 Ly6gP35461 111 aa9.28□□□□□ -0.92
Trim23-201ENSMUST00000022225 Gm17334Q8C6U3 126 aa9.27□□□□□ -0.92
Trim23-201ENSMUST00000022225 Timm17aQ9Z0V8 171 aa9.27□□□□□ -0.92
Trim23-201ENSMUST00000022225 Gm29423A0A087WRM1 55 aa9.27□□□□□ -0.93
Trim23-201ENSMUST00000022225 F11rO88792 300 aa9.27□□□□□ -0.93
Trim23-201ENSMUST00000022225 LeprotO89013 131 aa9.27□□□□□ -0.93
Trim23-201ENSMUST00000022225 Ube2e1P52482 193 aa9.27□□□□□ -0.93
Trim23-201ENSMUST00000022225 Odf1Q61999 247 aa9.27□□□□□ -0.93
Trim23-201ENSMUST00000022225 Ighv1-62-3P01754 117 aa9.27□□□□□ -0.93
Trim23-201ENSMUST00000022225 CrygdP04342 174 aa9.27□□□□□ -0.93
Trim23-201ENSMUST00000022225 Defa16P50714 93 aa9.27□□□□□ -0.93
Trim23-201ENSMUST00000022225 Wfdc15bQ9JHY4 80 aa9.27□□□□□ -0.93
Trim23-201ENSMUST00000022225 Igkv4-70A0A0B4J1I5 116 aa9.26□□□□□ -0.93
Trim23-201ENSMUST00000022225 C1qcQ02105 246 aa9.26□□□□□ -0.93
Trim23-201ENSMUST00000022225 Tcf15Q60756 195 aa9.26□□□□□ -0.93
Trim23-201ENSMUST00000022225 Parm1Q923D3 296 aa9.26□□□□□ -0.93
Trim23-201ENSMUST00000022225 Prss58Q8BW11 241 aa9.26□□□□□ -0.93
Trim23-201ENSMUST00000022225 Tmem263Q9DAM7 115 aa9.26□□□□□ -0.93
Trim23-201ENSMUST00000022225 Cacna1aP97445 2368 aa9.26□□□□□ -0.93
Trim23-201ENSMUST00000022225 Ighv1-75A0A075B5Y2 117 aa9.25□□□□□ -0.93
Trim23-201ENSMUST00000022225 Ighv1-81A0A075B5Y4 117 aa9.25□□□□□ -0.93
Trim23-201ENSMUST00000022225 BokO35425 213 aa9.25□□□□□ -0.93
Trim23-201ENSMUST00000022225 CntfrO88507 372 aa9.25□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 64.8 ms