RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W PET122P10355 254 aa2.52□□□□□ -2.01
VPS16YPL045W NAT1P12945 854 aaKnown RBP2.52□□□□□ -2.01
VPS16YPL045W PDX1P16451 410 aa2.52□□□□□ -2.01
VPS16YPL045W PRE2P30656 287 aaKnown RBP2.52□□□□□ -2.01
VPS16YPL045W MUM2P38236 366 aa2.52□□□□□ -2.01
VPS16YPL045W SRP72P38688 640 aaKnown RBP2.52□□□□□ -2.01
VPS16YPL045W ETP1P38748 585 aaKnown RBP2.52□□□□□ -2.01
VPS16YPL045W YEL025CP39991 1188 aa2.52□□□□□ -2.01
VPS16YPL045W MRX6P48564 524 aa2.52□□□□□ -2.01
VPS16YPL045W COS12P53053 380 aa2.52□□□□□ -2.01
VPS16YPL045W MTL1P53214 551 aa2.52□□□□□ -2.01
VPS16YPL045W RGC1Q06108 1083 aaKnown RBP2.52□□□□□ -2.01
VPS16YPL045W IRC3Q06683 689 aa2.52□□□□□ -2.01
VPS16YPL045W PSR1Q07800 427 aa2.52□□□□□ -2.01
VPS16YPL045W ENT4Q07872 247 aa2.52□□□□□ -2.01
VPS16YPL045W DIA2Q08496 732 aaPredicted RBP2.52□□□□□ -2.01
VPS16YPL045W CTT1P06115 562 aa2.51□□□□□ -2.01
VPS16YPL045W SEC53P07283 254 aaKnown RBP2.51□□□□□ -2.01
VPS16YPL045W SEC15P22224 910 aa2.51□□□□□ -2.01
VPS16YPL045W YCK1P23291 538 aa2.51□□□□□ -2.01
VPS16YPL045W PEX1P24004 1043 aa2.51□□□□□ -2.01
VPS16YPL045W COQ2P32378 372 aa2.51□□□□□ -2.01
VPS16YPL045W DCG1P32460 244 aa2.51□□□□□ -2.01
VPS16YPL045W TAT1P38085 619 aa2.51□□□□□ -2.01
VPS16YPL045W LYS9P38999 446 aa2.51□□□□□ -2.01
VPS16YPL045W SPO22P40511 975 aa2.51□□□□□ -2.01
VPS16YPL045W ZAP1P47043 880 aa2.51□□□□□ -2.01
VPS16YPL045W CTH1P47976 325 aa2.51□□□□□ -2.01
VPS16YPL045W DSD1P53095 428 aa2.51□□□□□ -2.01
VPS16YPL045W YGR130CP53278 816 aa2.51□□□□□ -2.01
VPS16YPL045W FDC1Q03034 503 aa2.51□□□□□ -2.01
VPS16YPL045W NRG1Q03125 231 aa2.51□□□□□ -2.01
VPS16YPL045W NGL3Q03210 505 aa2.51□□□□□ -2.01
VPS16YPL045W CTK1Q03957 528 aaKnown RBP2.51□□□□□ -2.01
VPS16YPL045W RAD30Q04049 632 aa2.51□□□□□ -2.01
VPS16YPL045W RCO1Q04779 684 aa2.51□□□□□ -2.01
VPS16YPL045W THI22Q06490 572 aa2.51□□□□□ -2.01
VPS16YPL045W ARR3Q06598 404 aa2.51□□□□□ -2.01
VPS16YPL045W CTI6Q08923 506 aa2.51□□□□□ -2.01
VPS16YPL045W NMD4Q12129 218 aa2.51□□□□□ -2.01
VPS16YPL045W PUS1Q12211 544 aaKnown RBP2.51□□□□□ -2.01
VPS16YPL045W NPC2Q12408 173 aa2.51□□□□□ -2.01
VPS16YPL045W TRM11Q12463 433 aa2.51□□□□□ -2.01
VPS16YPL045W YBR126W-AQ8TGU7 68 aa2.51□□□□□ -2.01
VPS16YPL045W RPA190P10964 1664 aaKnown RBP2.51□□□□□ -2.01
VPS16YPL045W TOP2P06786 1428 aaKnown RBP2.51□□□□□ -2.01
VPS16YPL045W ATP2P00830 511 aaKnown RBP2.51□□□□□ -2.01
VPS16YPL045W ILS1P09436 1072 aaKnown RBP2.51□□□□□ -2.01
VPS16YPL045W VPS33P20795 691 aa2.51□□□□□ -2.01
VPS16YPL045W EMC1P25574 760 aa2.51□□□□□ -2.01
VPS16YPL045W DBF4P32325 704 aa2.51□□□□□ -2.01
VPS16YPL045W COS111P38308 924 aa2.51□□□□□ -2.01
VPS16YPL045W ARB1P40024 610 aaKnown RBP2.51□□□□□ -2.01
VPS16YPL045W YGR016WP53209 190 aa2.51□□□□□ -2.01
VPS16YPL045W TAM41P53230 385 aa2.51□□□□□ -2.01
VPS16YPL045W REG1Q00816 1014 aa2.51□□□□□ -2.01
VPS16YPL045W RPT6Q01939 405 aaKnown RBP2.51□□□□□ -2.01
VPS16YPL045W YMR187CQ03236 431 aa2.51□□□□□ -2.01
VPS16YPL045W ARP9Q05123 467 aa2.51□□□□□ -2.01
VPS16YPL045W YFT2Q06676 274 aa2.51□□□□□ -2.01
VPS16YPL045W PSK2Q08217 1101 aa2.51□□□□□ -2.01
VPS16YPL045W MCA1Q08601 432 aa2.51□□□□□ -2.01
VPS16YPL045W TMA16Q08687 178 aa2.51□□□□□ -2.01
VPS16YPL045W SFI1Q12369 946 aa2.51□□□□□ -2.01
VPS16YPL045W RTN2Q12443 393 aa2.51□□□□□ -2.01
VPS16YPL045W TY1B-JR2P47100 1755 aaKnown RBP2.51□□□□□ -2.01
VPS16YPL045W TY1B-ER2Q03619 1755 aa2.51□□□□□ -2.01
VPS16YPL045W TY1B-MR1Q04214 1755 aa2.51□□□□□ -2.01
VPS16YPL045W TY1B-MR2Q04670 1755 aaKnown RBP2.51□□□□□ -2.01
VPS16YPL045W TY1B-LR1Q12088 1755 aaKnown RBP2.51□□□□□ -2.01
VPS16YPL045W TY1B-NL1Q12112 1755 aa2.51□□□□□ -2.01
VPS16YPL045W TY1B-GR1Q12141 1755 aa2.51□□□□□ -2.01
VPS16YPL045W TY1B-BLQ12490 1755 aa2.51□□□□□ -2.01
VPS16YPL045W CYC7P00045 113 aa2.5□□□□□ -2.01
VPS16YPL045W SOD2P00447 233 aa2.5□□□□□ -2.01
VPS16YPL045W SEC12P11655 471 aa2.5□□□□□ -2.01
VPS16YPL045W ERG8P24521 451 aa2.5□□□□□ -2.01
VPS16YPL045W YCR015CP25616 317 aa2.5□□□□□ -2.01
VPS16YPL045W KAE1P36132 386 aa2.5□□□□□ -2.01
VPS16YPL045W UTP9P38882 575 aaKnown RBP2.5□□□□□ -2.01
VPS16YPL045W LRO1P40345 661 aa2.5□□□□□ -2.01
VPS16YPL045W YIL077CP40508 320 aa2.5□□□□□ -2.01
VPS16YPL045W VPS4P52917 437 aa2.5□□□□□ -2.01
VPS16YPL045W ZDS2P54786 942 aa2.5□□□□□ -2.01
VPS16YPL045W YDR131CQ03899 556 aa2.5□□□□□ -2.01
VPS16YPL045W STP3Q05937 343 aa2.5□□□□□ -2.01
VPS16YPL045W DUS4Q06063 367 aa2.5□□□□□ -2.01
VPS16YPL045W YOR1P53049 1477 aa2.5□□□□□ -2.01
VPS16YPL045W DAL5P15365 543 aa2.5□□□□□ -2.01
VPS16YPL045W KAR3P17119 729 aa2.5□□□□□ -2.01
VPS16YPL045W LCB1P25045 558 aaKnown RBP2.5□□□□□ -2.01
VPS16YPL045W FEN2P25621 512 aaKnown RBP2.5□□□□□ -2.01
VPS16YPL045W ANP1P32629 500 aa2.5□□□□□ -2.01
VPS16YPL045W ORC2P32833 620 aa2.5□□□□□ -2.01
VPS16YPL045W YBL029WP38201 376 aa2.5□□□□□ -2.01
VPS16YPL045W FLC2P39719 783 aa2.5□□□□□ -2.01
VPS16YPL045W LTP1P40347 161 aa2.5□□□□□ -2.01
VPS16YPL045W BAP3P41815 604 aa2.5□□□□□ -2.01
VPS16YPL045W VPS62P53285 467 aa2.5□□□□□ -2.01
VPS16YPL045W NSG2P53898 299 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms