RNA–Protein interactions for RNA: YPL011C

TAF3, Transcript of TFIID subunit (47 kDa), yeast

Gene TAF3, Length 1,062 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TAF3	YPL011C	BSP1	Q06604	576 aa		4.67	□□□□□ -1.66
TAF3	YPL011C	CYK3	Q07533	885 aa		4.67	□□□□□ -1.66
TAF3	YPL011C	AIM6	Q07716	390 aa		4.67	□□□□□ -1.66
TAF3	YPL011C	YLR111W	Q12528	110 aa		4.67	□□□□□ -1.66
TAF3	YPL011C	CTT1	P06115	562 aa		4.66	□□□□□ -1.66
TAF3	YPL011C	SIR1	P21691	654 aa		4.66	□□□□□ -1.66
TAF3	YPL011C	ATP23	P53722	227 aa		4.66	□□□□□ -1.66
TAF3	YPL011C	MOT3	P54785	490 aa	Known RBP	4.66	□□□□□ -1.66
TAF3	YPL011C	YDL242W	Q07746	117 aa		4.66	□□□□□ -1.66
TAF3	YPL011C	PTP2	P29461	750 aa		4.65	□□□□□ -1.67
TAF3	YPL011C	MTG2	P38860	518 aa		4.65	□□□□□ -1.67
TAF3	YPL011C	HIS6	P40545	261 aa		4.65	□□□□□ -1.67
TAF3	YPL011C	NMD5	P46970	1048 aa		4.65	□□□□□ -1.67
TAF3	YPL011C	ESF2	P53743	316 aa	Known RBP	4.65	□□□□□ -1.67
TAF3	YPL011C	CRF1	Q04930	467 aa		4.65	□□□□□ -1.67
TAF3	YPL011C	ICL2	Q12031	575 aa		4.65	□□□□□ -1.67
TAF3	YPL011C	MAK32	P23060	363 aa		4.64	□□□□□ -1.67
TAF3	YPL011C	BEM3	P32873	1128 aa		4.64	□□□□□ -1.67
TAF3	YPL011C	KES1	P35844	434 aa	Known RBP	4.64	□□□□□ -1.67
TAF3	YPL011C	SAP1	P39955	897 aa	Known RBP	4.64	□□□□□ -1.67
TAF3	YPL011C	XBP1	P40489	647 aa		4.64	□□□□□ -1.67
TAF3	YPL011C	BPL1	P48445	690 aa	Predicted RBP	4.64	□□□□□ -1.67
TAF3	YPL011C	COG2	P53271	262 aa		4.64	□□□□□ -1.67
TAF3	YPL011C	IRC3	Q06683	689 aa		4.64	□□□□□ -1.67
TAF3	YPL011C	YER175W-A	Q8TGU4	54 aa		4.64	□□□□□ -1.67
TAF3	YPL011C	APM3	P38153	483 aa		4.63	□□□□□ -1.67
TAF3	YPL011C	SPC72	P39723	622 aa		4.63	□□□□□ -1.67
TAF3	YPL011C	ULP2	P40537	1034 aa	Predicted RBP	4.63	□□□□□ -1.67
TAF3	YPL011C	PLM2	Q04383	521 aa		4.63	□□□□□ -1.67
TAF3	YPL011C	YML053C	Q04978	212 aa		4.63	□□□□□ -1.67
TAF3	YPL011C	ORM2	Q06144	216 aa		4.63	□□□□□ -1.67
TAF3	YPL011C	RAD34	Q06665	692 aa		4.63	□□□□□ -1.67
TAF3	YPL011C	RRP6	Q12149	733 aa	Known RBP	4.63	□□□□□ -1.67
TAF3	YPL011C	YBR255C-A	Q3E776	120 aa		4.63	□□□□□ -1.67
TAF3	YPL011C	PNO1	Q99216	274 aa	Known RBP	4.63	□□□□□ -1.67
TAF3	YPL011C	SES1	P07284	462 aa	Known RBP	4.62	□□□□□ -1.67
TAF3	YPL011C	MCM3	P24279	971 aa	Known RBP	4.62	□□□□□ -1.67
TAF3	YPL011C	IMD2	P38697	523 aa	Known RBP	4.62	□□□□□ -1.67
TAF3	YPL011C	LNP1	P38878	278 aa		4.62	□□□□□ -1.67
TAF3	YPL011C	IMD3	P50095	523 aa	Known RBP	4.62	□□□□□ -1.67
TAF3	YPL011C	RSC9	Q03124	581 aa		4.62	□□□□□ -1.67
TAF3	YPL011C	PIF1	P07271	859 aa		4.61	□□□□□ -1.67
TAF3	YPL011C	BIK1	P11709	440 aa		4.61	□□□□□ -1.67
TAF3	YPL011C	YHL041W	P38730	149 aa		4.61	□□□□□ -1.67
TAF3	YPL011C	CIR1	P42940	261 aa		4.61	□□□□□ -1.67
TAF3	YPL011C	CPR6	P53691	371 aa	Known RBP	4.61	□□□□□ -1.67
TAF3	YPL011C	HIM1	Q06674	414 aa		4.61	□□□□□ -1.67
TAF3	YPL011C	IWR1	Q07532	353 aa	Predicted RBP	4.61	□□□□□ -1.67
TAF3	YPL011C	YOL057W	Q08225	711 aa		4.61	□□□□□ -1.67
TAF3	YPL011C	PRS5	Q12265	496 aa	Known RBP	4.61	□□□□□ -1.67
TAF3	YPL011C	RTC1	Q08281	1341 aa		4.61	□□□□□ -1.67
TAF3	YPL011C	CET1	O13297	549 aa	Predicted RBP	4.6	□□□□□ -1.67
TAF3	YPL011C	POL3	P15436	1097 aa		4.6	□□□□□ -1.67
TAF3	YPL011C	PTP1	P25044	335 aa		4.6	□□□□□ -1.67
TAF3	YPL011C	SWI4	P25302	1093 aa	Known RBP	4.6	□□□□□ -1.67
TAF3	YPL011C	FTH1	P38310	465 aa		4.6	□□□□□ -1.67
TAF3	YPL011C	ERC1	P38767	581 aa		4.6	□□□□□ -1.67
TAF3	YPL011C	CAB2	P40506	365 aa		4.6	□□□□□ -1.67
TAF3	YPL011C	NET1	P47035	1189 aa		4.6	□□□□□ -1.67
TAF3	YPL011C	AFT2	Q08957	416 aa		4.6	□□□□□ -1.67
TAF3	YPL011C	BI2	P03873	423 aa		4.59	□□□□□ -1.67
TAF3	YPL011C	ADE3	P07245	946 aa	Known RBP	4.59	□□□□□ -1.67
TAF3	YPL011C	RIT1	P23796	513 aa		4.59	□□□□□ -1.67
TAF3	YPL011C	VBA2	P38358	474 aa	Known RBP	4.59	□□□□□ -1.67
TAF3	YPL011C	NOP2	P40991	618 aa	Known RBP	4.59	□□□□□ -1.67
TAF3	YPL011C	PSA1	P41940	361 aa	Known RBP	4.59	□□□□□ -1.67
TAF3	YPL011C	SNO3	P43544	222 aa		4.59	□□□□□ -1.67
TAF3	YPL011C	IMA1	P53051	589 aa		4.59	□□□□□ -1.67
TAF3	YPL011C	IDP3	P53982	420 aa	Known RBP	4.59	□□□□□ -1.67
TAF3	YPL011C	TPO3	Q06451	622 aa		4.59	□□□□□ -1.67
TAF3	YPL011C	YPL191C	Q08930	360 aa		4.59	□□□□□ -1.67
TAF3	YPL011C	LYS21	Q12122	440 aa	Known RBP	4.59	□□□□□ -1.67
TAF3	YPL011C	SUL2	Q12325	893 aa		4.59	□□□□□ -1.67
TAF3	YPL011C	PDE1	P22434	369 aa		4.58	□□□□□ -1.68
TAF3	YPL011C	URE2	P23202	354 aa	Known RBP	4.58	□□□□□ -1.68
TAF3	YPL011C	MSH1	P25846	959 aa		4.58	□□□□□ -1.68
TAF3	YPL011C	ECM32	P32644	1121 aa	Known RBP	4.58	□□□□□ -1.68
TAF3	YPL011C	BUD16	P39988	312 aa		4.58	□□□□□ -1.68
TAF3	YPL011C	CIN1	P40987	1014 aa		4.58	□□□□□ -1.68
TAF3	YPL011C	TAN1	P53072	289 aa	Predicted RBP	4.58	□□□□□ -1.68
TAF3	YPL011C	YNL058C	P53947	316 aa		4.58	□□□□□ -1.68
TAF3	YPL011C	YAT1	P80235	687 aa		4.58	□□□□□ -1.68
TAF3	YPL011C	YPL071C	Q02864	156 aa		4.58	□□□□□ -1.68
TAF3	YPL011C	NYV1	Q12255	253 aa		4.58	□□□□□ -1.68
TAF3	YPL011C	SEC18	P18759	758 aa	Known RBP	4.57	□□□□□ -1.68
TAF3	YPL011C	URK1	P27515	501 aa		4.57	□□□□□ -1.68
TAF3	YPL011C	ARP2	P32381	391 aa	Known RBP	4.57	□□□□□ -1.68
TAF3	YPL011C	RPF2	P36160	344 aa	Known RBP	4.57	□□□□□ -1.68
TAF3	YPL011C	YBR138C	P38277	524 aa		4.57	□□□□□ -1.68
TAF3	YPL011C	RPT2	P40327	437 aa	Known RBP	4.57	□□□□□ -1.68
TAF3	YPL011C	UBP7	P40453	1071 aa		4.57	□□□□□ -1.68
TAF3	YPL011C	NPA3	P47122	385 aa		4.57	□□□□□ -1.68
TAF3	YPL011C	ERG13	P54839	491 aa	Known RBP	4.57	□□□□□ -1.68
TAF3	YPL011C	YPL108W	Q02872	168 aa	Predicted RBP	4.57	□□□□□ -1.68
TAF3	YPL011C	YMR085W	P0CF18	432 aa		4.56	□□□□□ -1.68
TAF3	YPL011C	YEF3	P16521	1044 aa	Known RBP	4.56	□□□□□ -1.68
TAF3	YPL011C	ERV46	P39727	415 aa		4.56	□□□□□ -1.68
TAF3	YPL011C	IRC7	P43623	340 aa		4.56	□□□□□ -1.68
TAF3	YPL011C	TAM41	P53230	385 aa		4.56	□□□□□ -1.68
TAF3	YPL011C	ATG21	Q02887	496 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms