RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W HLJ1P48353 224 aa1.87□□□□□ -2.11
RTP1YMR185W ZIP2P53061 704 aa1.87□□□□□ -2.11
RTP1YMR185W HOP2P53187 214 aa1.87□□□□□ -2.11
RTP1YMR185W YGR054WP53235 642 aaKnown RBP1.87□□□□□ -2.11
RTP1YMR185W BET4Q00618 327 aa1.87□□□□□ -2.11
RTP1YMR185W LGE1Q02796 332 aaKnown RBP1.87□□□□□ -2.11
RTP1YMR185W ERO1Q03103 563 aa1.87□□□□□ -2.11
RTP1YMR185W ADI1Q03677 179 aa1.87□□□□□ -2.11
RTP1YMR185W FMP42Q04991 504 aa1.87□□□□□ -2.11
RTP1YMR185W YCS4Q06156 1176 aa1.87□□□□□ -2.11
RTP1YMR185W ACK1Q07622 623 aaPredicted RBP1.87□□□□□ -2.11
RTP1YMR185W MSH5Q12175 901 aa1.87□□□□□ -2.11
RTP1YMR185W IES3Q12345 250 aa1.87□□□□□ -2.11
RTP1YMR185W SPE4Q12455 300 aa1.87□□□□□ -2.11
RTP1YMR185W SRD1P09007 221 aa1.87□□□□□ -2.11
RTP1YMR185W ILS1P09436 1072 aaKnown RBP1.87□□□□□ -2.11
RTP1YMR185W YAK1P14680 807 aa1.87□□□□□ -2.11
RTP1YMR185W TFC1P32367 649 aa1.87□□□□□ -2.11
RTP1YMR185W SSE1P32589 693 aaKnown RBP1.87□□□□□ -2.11
RTP1YMR185W SEC6P32844 805 aa1.87□□□□□ -2.11
RTP1YMR185W EXO5P38289 585 aa1.87□□□□□ -2.11
RTP1YMR185W ARG2P40360 574 aa1.87□□□□□ -2.11
RTP1YMR185W PFK26P40433 827 aaKnown RBP1.87□□□□□ -2.11
RTP1YMR185W ARC1P46672 376 aaKnown RBP1.87□□□□□ -2.11
RTP1YMR185W VMA10P48836 114 aaKnown RBP1.87□□□□□ -2.11
RTP1YMR185W TEL2P53038 688 aa1.87□□□□□ -2.11
RTP1YMR185W COG6P53959 839 aa1.87□□□□□ -2.11
RTP1YMR185W ORC4P54791 529 aa1.87□□□□□ -2.11
RTP1YMR185W TIM8P57744 87 aa1.87□□□□□ -2.11
RTP1YMR185W RPM2Q02773 1202 aa1.87□□□□□ -2.11
RTP1YMR185W DAL4Q04895 635 aa1.87□□□□□ -2.11
RTP1YMR185W SMC5Q08204 1093 aa1.87□□□□□ -2.11
RTP1YMR185W YPL216WQ08964 1102 aa1.87□□□□□ -2.11
RTP1YMR185W FAP7Q12055 197 aaPredicted RBP1.87□□□□□ -2.11
RTP1YMR185W GIS3Q12418 502 aa1.87□□□□□ -2.11
RTP1YMR185W TRM11Q12463 433 aa1.87□□□□□ -2.11
RTP1YMR185W AVL9Q12500 764 aa1.87□□□□□ -2.11
RTP1YMR185W UBR2Q07963 1872 aa1.86□□□□□ -2.11
RTP1YMR185W LAA1P39526 2014 aa1.86□□□□□ -2.11
RTP1YMR185W ATP2P00830 511 aaKnown RBP1.86□□□□□ -2.11
RTP1YMR185W SCP160P06105 1222 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
RTP1YMR185W CDC33P07260 213 aaKnown RBP1.86□□□□□ -2.11
RTP1YMR185W CDC48P25694 835 aaKnown RBP1.86□□□□□ -2.11
RTP1YMR185W CHS3P29465 1165 aa1.86□□□□□ -2.11
RTP1YMR185W EFT1P32324 842 aaKnown RBP1.86□□□□□ -2.11
RTP1YMR185W PUP2P32379 260 aa1.86□□□□□ -2.11
RTP1YMR185W KAR9P32526 644 aa1.86□□□□□ -2.11
RTP1YMR185W SIP2P34164 415 aaKnown RBP1.86□□□□□ -2.11
RTP1YMR185W CUE2P36075 443 aaKnown RBP1.86□□□□□ -2.11
RTP1YMR185W RRP14P36080 434 aaKnown RBP1.86□□□□□ -2.11
RTP1YMR185W DBP7P36120 742 aaKnown RBP1.86□□□□□ -2.11
RTP1YMR185W ECM4P36156 370 aa1.86□□□□□ -2.11
RTP1YMR185W SHM2P37291 469 aaKnown RBP1.86□□□□□ -2.11
RTP1YMR185W DUG2P38149 878 aa1.86□□□□□ -2.11
RTP1YMR185W CTP1P38152 299 aa1.86□□□□□ -2.11
RTP1YMR185W UBP13P38187 747 aa1.86□□□□□ -2.11
RTP1YMR185W CCZ1P38273 704 aa1.86□□□□□ -2.11
RTP1YMR185W UTP9P38882 575 aaKnown RBP1.86□□□□□ -2.11
RTP1YMR185W NUP60P39705 539 aa1.86□□□□□ -2.11
RTP1YMR185W FRT2P39734 528 aa1.86□□□□□ -2.11
RTP1YMR185W NPR2P39923 615 aa1.86□□□□□ -2.11
RTP1YMR185W TMA108P40462 946 aa1.86□□□□□ -2.11
RTP1YMR185W MKT1P40850 830 aaKnown RBP1.86□□□□□ -2.11
RTP1YMR185W DAS1P47005 663 aa1.86□□□□□ -2.11
RTP1YMR185W MCM6P53091 1017 aaKnown RBP1.86□□□□□ -2.11
RTP1YMR185W YGL108CP53139 140 aa1.86□□□□□ -2.11
RTP1YMR185W USE1P53146 245 aa1.86□□□□□ -2.11
RTP1YMR185W ORM1P53224 222 aa1.86□□□□□ -2.11
RTP1YMR185W SOL4P53315 255 aa1.86□□□□□ -2.11
RTP1YMR185W PGA2P53903 129 aa1.86□□□□□ -2.11
RTP1YMR185W TMA20P89886 181 aaPredicted RBP1.86□□□□□ -2.11
RTP1YMR185W RPA49Q01080 415 aaPredicted RBP1.86□□□□□ -2.11
RTP1YMR185W YKR005CQ02203 525 aa1.86□□□□□ -2.11
RTP1YMR185W ATP25Q03153 612 aa1.86□□□□□ -2.11
RTP1YMR185W CLU1Q03690 1277 aaKnown RBP1.86□□□□□ -2.11
RTP1YMR185W YDR179W-AQ03983 463 aa1.86□□□□□ -2.11
RTP1YMR185W UFO1Q04511 668 aa1.86□□□□□ -2.11
RTP1YMR185W GSF2Q04697 403 aaKnown RBP1.86□□□□□ -2.11
RTP1YMR185W PRM6Q04705 352 aa1.86□□□□□ -2.11
RTP1YMR185W PHM6Q05637 104 aa1.86□□□□□ -2.11
RTP1YMR185W GUD1Q07729 489 aa1.86□□□□□ -2.11
RTP1YMR185W MCH5Q08777 521 aa1.86□□□□□ -2.11
RTP1YMR185W ACM1Q08981 209 aa1.86□□□□□ -2.11
RTP1YMR185W SGT2Q12118 346 aaKnown RBP1.86□□□□□ -2.11
RTP1YMR185W MPH2P0CD99 609 aa1.86□□□□□ -2.11
RTP1YMR185W IMA3P0CW40 589 aa1.86□□□□□ -2.11
RTP1YMR185W IMA4P0CW41 589 aa1.86□□□□□ -2.11
RTP1YMR185W MSD1P15179 658 aaKnown RBP1.86□□□□□ -2.11
RTP1YMR185W PWP2P25635 923 aaKnown RBP1.86□□□□□ -2.11
RTP1YMR185W MLS1P30952 554 aa1.86□□□□□ -2.11
RTP1YMR185W BEM3P32873 1128 aa1.86□□□□□ -2.11
RTP1YMR185W UTP11P34247 250 aaPredicted RBP1.86□□□□□ -2.11
RTP1YMR185W YKL023WP36103 277 aaKnown RBP1.86□□□□□ -2.11
RTP1YMR185W PBP2P38151 413 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
RTP1YMR185W SUL1P38359 859 aa1.86□□□□□ -2.11
RTP1YMR185W GOS1P38736 223 aa1.86□□□□□ -2.11
RTP1YMR185W GPB2P39717 880 aa1.86□□□□□ -2.11
RTP1YMR185W NPP2P39997 493 aa1.86□□□□□ -2.11
RTP1YMR185W AIM20P40451 204 aa1.86□□□□□ -2.11
RTP1YMR185W DPH1P40487 425 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms