RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C PET130P47065 347 aa2.22□□□□□ -2.05
UFD4YKL010C RIM21P48565 533 aa2.22□□□□□ -2.05
UFD4YKL010C HOP2P53187 214 aa2.22□□□□□ -2.05
UFD4YKL010C IGO1P53897 168 aa2.22□□□□□ -2.05
UFD4YKL010C GTR1Q00582 310 aa2.22□□□□□ -2.05
UFD4YKL010C OXR1Q08952 273 aa2.22□□□□□ -2.05
UFD4YKL010C VPS54Q12071 889 aa2.22□□□□□ -2.05
UFD4YKL010C TY3A-GQ12173 290 aa2.22□□□□□ -2.05
UFD4YKL010C YLL056CQ12177 298 aa2.22□□□□□ -2.05
UFD4YKL010C TY3A-IQ99219 290 aa2.22□□□□□ -2.05
UFD4YKL010C MRPL25P23369 157 aa2.21□□□□□ -2.06
UFD4YKL010C PIN4P34217 668 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
UFD4YKL010C AHP1P38013 176 aaKnown RBP2.21□□□□□ -2.06
UFD4YKL010C FZO1P38297 855 aa2.21□□□□□ -2.06
UFD4YKL010C ARN1P38731 627 aa2.21□□□□□ -2.06
UFD4YKL010C SKN7P38889 622 aa2.21□□□□□ -2.06
UFD4YKL010C KTR7P40504 517 aa2.21□□□□□ -2.06
UFD4YKL010C DSN1P40568 576 aa2.21□□□□□ -2.06
UFD4YKL010C BIT61P47041 543 aa2.21□□□□□ -2.06
UFD4YKL010C AVT1P47082 602 aa2.21□□□□□ -2.06
UFD4YKL010C IMA1P53051 589 aa2.21□□□□□ -2.06
UFD4YKL010C IPI3P53877 555 aa2.21□□□□□ -2.06
UFD4YKL010C SRL4Q03085 281 aa2.21□□□□□ -2.06
UFD4YKL010C TFB3Q03290 321 aa2.21□□□□□ -2.06
UFD4YKL010C GAS3Q03655 524 aa2.21□□□□□ -2.06
UFD4YKL010C RNH1Q04740 348 aa2.21□□□□□ -2.06
UFD4YKL010C TMA46Q12000 345 aaKnown RBP2.21□□□□□ -2.06
UFD4YKL010C VPS5Q92331 675 aa2.21□□□□□ -2.06
UFD4YKL010C SLH1P53327 1967 aaKnown RBP2.21□□□□□ -2.06
UFD4YKL010C CHS1P08004 1131 aa2.21□□□□□ -2.06
UFD4YKL010C MCM1P11746 286 aa2.21□□□□□ -2.06
UFD4YKL010C TRX1P22217 103 aaKnown RBP2.21□□□□□ -2.06
UFD4YKL010C URA7P28274 579 aaKnown RBP2.21□□□□□ -2.06
UFD4YKL010C VPH2P32341 215 aa2.21□□□□□ -2.06
UFD4YKL010C DSS4P32601 143 aa2.21□□□□□ -2.06
UFD4YKL010C CSE1P33307 960 aa2.21□□□□□ -2.06
UFD4YKL010C LRG1P35688 1017 aa2.21□□□□□ -2.06
UFD4YKL010C POA1P38218 177 aa2.21□□□□□ -2.06
UFD4YKL010C GVP36P40531 326 aaKnown RBP2.21□□□□□ -2.06
UFD4YKL010C SNG1P46950 547 aa2.21□□□□□ -2.06
UFD4YKL010C FMP33P46998 180 aa2.21□□□□□ -2.06
UFD4YKL010C SVL3Q03088 825 aaKnown RBP2.21□□□□□ -2.06
UFD4YKL010C ADE13Q05911 482 aaKnown RBP2.21□□□□□ -2.06
UFD4YKL010C HDA3Q06623 655 aa2.21□□□□□ -2.06
UFD4YKL010C SDH5Q08230 162 aa2.21□□□□□ -2.06
UFD4YKL010C RRD2Q12461 358 aa2.21□□□□□ -2.06
UFD4YKL010C RRP36Q12481 300 aaPredicted RBP2.21□□□□□ -2.06
UFD4YKL010C GPM1P00950 247 aaKnown RBP2.21□□□□□ -2.06
UFD4YKL010C TEF1P02994 458 aaKnown RBP2.21□□□□□ -2.06
UFD4YKL010C ERR1P0CX10 437 aa2.21□□□□□ -2.06
UFD4YKL010C ERR2P0CX11 437 aa2.21□□□□□ -2.06
UFD4YKL010C GPA2P10823 449 aa2.21□□□□□ -2.06
UFD4YKL010C HPR1P17629 752 aaKnown RBP2.21□□□□□ -2.06
UFD4YKL010C RDS2P19541 446 aaKnown RBP2.21□□□□□ -2.06
UFD4YKL010C HSP60P19882 572 aaKnown RBP2.21□□□□□ -2.06
UFD4YKL010C BUD2P33314 1104 aa2.21□□□□□ -2.06
UFD4YKL010C STE13P33894 931 aa2.21□□□□□ -2.06
UFD4YKL010C SRL3P36167 246 aa2.21□□□□□ -2.06
UFD4YKL010C UTP9P38882 575 aaKnown RBP2.21□□□□□ -2.06
UFD4YKL010C OAF1P39720 1047 aaPredicted RBP2.21□□□□□ -2.06
UFD4YKL010C SAW1P39735 261 aa2.21□□□□□ -2.06
UFD4YKL010C ERR3P42222 437 aa2.21□□□□□ -2.06
UFD4YKL010C AGP3P43548 558 aa2.21□□□□□ -2.06
UFD4YKL010C NUP84P52891 726 aa2.21□□□□□ -2.06
UFD4YKL010C STR3P53101 465 aaKnown RBP2.21□□□□□ -2.06
UFD4YKL010C COG6P53959 839 aa2.21□□□□□ -2.06
UFD4YKL010C MZM1Q03429 123 aaPredicted RBP2.21□□□□□ -2.06
UFD4YKL010C GLO2Q05584 274 aa2.21□□□□□ -2.06
UFD4YKL010C FMP25Q08023 583 aa2.21□□□□□ -2.06
UFD4YKL010C SPE3Q12074 293 aaKnown RBP2.21□□□□□ -2.06
UFD4YKL010C PAB1P04147 577 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
UFD4YKL010C TPK2P06245 380 aa2.21□□□□□ -2.06
UFD4YKL010C MIS1P09440 975 aaKnown RBP2.21□□□□□ -2.06
UFD4YKL010C SSC1P0CS90 654 aaKnown RBP2.21□□□□□ -2.06
UFD4YKL010C POX1P13711 748 aa2.21□□□□□ -2.06
UFD4YKL010C CSM1P25651 190 aa2.21□□□□□ -2.06
UFD4YKL010C CUE2P36075 443 aaKnown RBP2.21□□□□□ -2.06
UFD4YKL010C CCL1P37366 393 aa2.21□□□□□ -2.06
UFD4YKL010C REG2P38232 338 aa2.21□□□□□ -2.06
UFD4YKL010C GDT1P38301 280 aaPredicted RBP2.21□□□□□ -2.06
UFD4YKL010C OTU2P38747 307 aaKnown RBP2.21□□□□□ -2.06
UFD4YKL010C SMF2P38778 549 aa2.21□□□□□ -2.06
UFD4YKL010C DSS1P39112 969 aa2.21□□□□□ -2.06
UFD4YKL010C FLC2P39719 783 aa2.21□□□□□ -2.06
UFD4YKL010C SSP120P39931 234 aaKnown RBP2.21□□□□□ -2.06
UFD4YKL010C YJR142WP47173 342 aa2.21□□□□□ -2.06
UFD4YKL010C TAN1P53072 289 aaPredicted RBP2.21□□□□□ -2.06
UFD4YKL010C NNF2P53253 936 aa2.21□□□□□ -2.06
UFD4YKL010C VPS9P54787 451 aa2.21□□□□□ -2.06
UFD4YKL010C SND1Q04007 877 aa2.21□□□□□ -2.06
UFD4YKL010C NBA1Q08229 501 aaKnown RBP2.21□□□□□ -2.06
UFD4YKL010C CFT2Q12102 859 aaPredicted RBP2.21□□□□□ -2.06
UFD4YKL010C CTF3Q12748 733 aa2.21□□□□□ -2.06
UFD4YKL010C GAL10P04397 699 aa2.2□□□□□ -2.06
UFD4YKL010C LEU1P07264 779 aaKnown RBP2.2□□□□□ -2.06
UFD4YKL010C MLS1P30952 554 aa2.2□□□□□ -2.06
UFD4YKL010C TYE7P33122 291 aaPredicted RBP2.2□□□□□ -2.06
UFD4YKL010C SHP1P34223 423 aa2.2□□□□□ -2.06
UFD4YKL010C CKB2P38930 258 aa2.2□□□□□ -2.06
UFD4YKL010C RSP5P39940 809 aaKnown RBP2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms