RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W SPO21Q12411 609 aa6.56□□□□□ -1.36
PRE3YJL001W PRP8P33334 2413 aaKnown RBP6.56□□□□□ -1.36
PRE3YJL001W TY4B-PA0A0B7P3V8 1104 aa6.55□□□□□ -1.36
PRE3YJL001W MSF1P08425 469 aa6.55□□□□□ -1.36
PRE3YJL001W CBF2P32504 956 aa6.55□□□□□ -1.36
PRE3YJL001W YKL107WP34251 309 aa6.55□□□□□ -1.36
PRE3YJL001W ECM13P38195 257 aa6.55□□□□□ -1.36
PRE3YJL001W DUN1P39009 513 aa6.55□□□□□ -1.36
PRE3YJL001W RSP5P39940 809 aaKnown RBP6.55□□□□□ -1.36
PRE3YJL001W CDC1P40986 491 aa6.55□□□□□ -1.36
PRE3YJL001W VEL1P53058 206 aa6.55□□□□□ -1.36
PRE3YJL001W PEX14P53112 341 aa6.55□□□□□ -1.36
PRE3YJL001W COQ6P53318 479 aa6.55□□□□□ -1.36
PRE3YJL001W SMA1Q02651 245 aa6.55□□□□□ -1.36
PRE3YJL001W HRD3Q05787 833 aa6.55□□□□□ -1.36
PRE3YJL001W RCL1Q08096 367 aaPredicted RBP6.55□□□□□ -1.36
PRE3YJL001W TLG2Q08144 397 aa6.55□□□□□ -1.36
PRE3YJL001W AVO1Q08236 1176 aa6.55□□□□□ -1.36
PRE3YJL001W TY4A-HQ6Q5P6 413 aa6.55□□□□□ -1.36
PRE3YJL001W ECM3Q99252 613 aa6.55□□□□□ -1.36
PRE3YJL001W NHA1Q99271 985 aa6.55□□□□□ -1.36
PRE3YJL001W BI4P03879 638 aa6.54□□□□□ -1.36
PRE3YJL001W SBP1P10080 294 aaKnown RBP6.54□□□□□ -1.36
PRE3YJL001W HSP60P19882 572 aaKnown RBP6.54□□□□□ -1.36
PRE3YJL001W PUF4P25339 888 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
PRE3YJL001W LRE1P25579 583 aaKnown RBP6.54□□□□□ -1.36
PRE3YJL001W CDC11P32458 415 aa6.54□□□□□ -1.36
PRE3YJL001W XRS2P33301 854 aa6.54□□□□□ -1.36
PRE3YJL001W HSP78P33416 811 aa6.54□□□□□ -1.36
PRE3YJL001W SRX1P36077 127 aa6.54□□□□□ -1.36
PRE3YJL001W YKL023WP36103 277 aaKnown RBP6.54□□□□□ -1.36
PRE3YJL001W YAR028WP39548 234 aa6.54□□□□□ -1.36
PRE3YJL001W YGL176CP46945 554 aa6.54□□□□□ -1.36
PRE3YJL001W NUP84P52891 726 aa6.54□□□□□ -1.36
PRE3YJL001W PIR3Q03180 325 aa6.54□□□□□ -1.36
PRE3YJL001W ALG6Q12001 544 aaKnown RBP6.54□□□□□ -1.36
PRE3YJL001W ERS1P17261 260 aa6.53□□□□□ -1.36
PRE3YJL001W GAL11P19659 1081 aa6.53□□□□□ -1.36
PRE3YJL001W MAE1P36013 669 aaKnown RBP6.53□□□□□ -1.36
PRE3YJL001W ALG3P38179 458 aa6.53□□□□□ -1.36
PRE3YJL001W BAT1P38891 393 aaKnown RBP6.53□□□□□ -1.36
PRE3YJL001W UFE1P41834 346 aa6.53□□□□□ -1.36
PRE3YJL001W HNT2P49775 206 aa6.53□□□□□ -1.36
PRE3YJL001W ERP6P53198 216 aa6.53□□□□□ -1.36
PRE3YJL001W RTN1Q04947 295 aaKnown RBP6.53□□□□□ -1.36
PRE3YJL001W POL2P21951 2222 aaKnown RBP6.52□□□□□ -1.37
PRE3YJL001W ARE1P25628 610 aa6.52□□□□□ -1.37
PRE3YJL001W CCR4P31384 837 aaKnown RBP6.52□□□□□ -1.37
PRE3YJL001W RML2P32611 393 aa6.52□□□□□ -1.37
PRE3YJL001W SGE1P33335 543 aa6.52□□□□□ -1.37
PRE3YJL001W STE13P33894 931 aa6.52□□□□□ -1.37
PRE3YJL001W NOP4P37838 685 aaKnown RBP6.52□□□□□ -1.37
PRE3YJL001W HSE1P38753 452 aa6.52□□□□□ -1.37
PRE3YJL001W SBE2P42223 864 aaKnown RBP6.52□□□□□ -1.37
PRE3YJL001W PFD1P46988 109 aa6.52□□□□□ -1.37
PRE3YJL001W ASG7P46993 209 aa6.52□□□□□ -1.37
PRE3YJL001W FLC3P53121 802 aa6.52□□□□□ -1.37
PRE3YJL001W YGR045CP53229 120 aa6.52□□□□□ -1.37
PRE3YJL001W ECM38Q05902 660 aaPredicted RBP6.52□□□□□ -1.37
PRE3YJL001W YOL075CQ08234 1294 aa6.52□□□□□ -1.37
PRE3YJL001W TRE1Q08919 783 aa6.52□□□□□ -1.37
PRE3YJL001W YPL066WQ12194 479 aa6.52□□□□□ -1.37
PRE3YJL001W AI5_BETAQ9ZZX0 354 aa6.52□□□□□ -1.37
PRE3YJL001W OM45P16547 393 aa6.51□□□□□ -1.37
PRE3YJL001W PRP9P19736 530 aaKnown RBP6.51□□□□□ -1.37
PRE3YJL001W MBP1P39678 833 aa6.51□□□□□ -1.37
PRE3YJL001W MPH1P40562 993 aa6.51□□□□□ -1.37
PRE3YJL001W PYK2P52489 506 aaKnown RBP6.51□□□□□ -1.37
PRE3YJL001W NPY1P53164 384 aa6.51□□□□□ -1.37
PRE3YJL001W YGL036WP53185 909 aaPredicted RBP6.51□□□□□ -1.37
PRE3YJL001W YMR187CQ03236 431 aa6.51□□□□□ -1.37
PRE3YJL001W VPS54Q12071 889 aa6.51□□□□□ -1.37
PRE3YJL001W YLR125WQ12138 136 aa6.51□□□□□ -1.37
PRE3YJL001W BRR2P32639 2163 aaKnown RBP6.51□□□□□ -1.37
PRE3YJL001W RPL22AP05749 121 aaKnown RBP6.5□□□□□ -1.37
PRE3YJL001W MLS1P30952 554 aa6.5□□□□□ -1.37
PRE3YJL001W YMC2P38087 329 aa6.5□□□□□ -1.37
PRE3YJL001W YJR061WP40355 935 aa6.5□□□□□ -1.37
PRE3YJL001W RSM25P40496 264 aa6.5□□□□□ -1.37
PRE3YJL001W SDS3P40505 327 aa6.5□□□□□ -1.37
PRE3YJL001W MND1P53102 219 aa6.5□□□□□ -1.37
PRE3YJL001W ELA1P53861 379 aaPredicted RBP6.5□□□□□ -1.37
PRE3YJL001W BIK1P11709 440 aa6.49□□□□□ -1.37
PRE3YJL001W CAP1P28495 268 aaKnown RBP6.49□□□□□ -1.37
PRE3YJL001W ABZ1P37254 787 aaPredicted RBP6.49□□□□□ -1.37
PRE3YJL001W YBR053CP38235 358 aa6.49□□□□□ -1.37
PRE3YJL001W LEU5P38702 357 aa6.49□□□□□ -1.37
PRE3YJL001W ALR2P43553 858 aa6.49□□□□□ -1.37
PRE3YJL001W RSC1P53236 928 aa6.49□□□□□ -1.37
PRE3YJL001W CLU1Q03690 1277 aaKnown RBP6.49□□□□□ -1.37
PRE3YJL001W YMR206WQ03695 313 aa6.49□□□□□ -1.37
PRE3YJL001W GIR2Q03768 265 aaPredicted RBP6.49□□□□□ -1.37
PRE3YJL001W SPG3Q04398 127 aaPredicted RBP6.49□□□□□ -1.37
PRE3YJL001W POB3Q04636 552 aaKnown RBP6.49□□□□□ -1.37
PRE3YJL001W SPP382Q06411 708 aaPredicted RBP6.49□□□□□ -1.37
PRE3YJL001W DIS3Q08162 1001 aaKnown RBP6.49□□□□□ -1.37
PRE3YJL001W APC5Q08683 685 aa6.49□□□□□ -1.37
PRE3YJL001W NDD1Q08887 554 aa6.49□□□□□ -1.37
PRE3YJL001W YOR223WQ12015 292 aa6.49□□□□□ -1.37
PRE3YJL001W RAD3P06839 778 aa6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms