RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeastyeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD3YHR170W SST2P11972 698 aaKnown RBP4.81□□□□□ -1.64
NMD3YHR170W DAL2P25335 343 aa4.81□□□□□ -1.64
NMD3YHR170W PAP1P29468 568 aaKnown RBP4.81□□□□□ -1.64
NMD3YHR170W RME1P32338 300 aaKnown RBP4.81□□□□□ -1.64
NMD3YHR170W AAR2P32357 355 aaPredicted RBP4.81□□□□□ -1.64
NMD3YHR170W MRX3P38172 270 aa4.81□□□□□ -1.64
NMD3YHR170W SIT1P39980 628 aa4.81□□□□□ -1.64
NMD3YHR170W SDS3P40505 327 aa4.81□□□□□ -1.64
NMD3YHR170W SEC26P41810 973 aaKnown RBP4.81□□□□□ -1.64
NMD3YHR170W COS5P47187 383 aa4.81□□□□□ -1.64
NMD3YHR170W UBX4P54730 416 aa4.81□□□□□ -1.64
NMD3YHR170W SML1Q04964 104 aa4.81□□□□□ -1.64
NMD3YHR170W VAC14Q06708 880 aa4.81□□□□□ -1.64
NMD3YHR170W OPY2Q06810 360 aa4.81□□□□□ -1.64
NMD3YHR170W XYL2Q07993 356 aa4.81□□□□□ -1.64
NMD3YHR170W ICL2Q12031 575 aa4.81□□□□□ -1.64
NMD3YHR170W SFI1Q12369 946 aa4.81□□□□□ -1.64
NMD3YHR170W COX4P04037 155 aa4.8□□□□□ -1.64
NMD3YHR170W ADE4P04046 510 aaKnown RBP4.8□□□□□ -1.64
NMD3YHR170W WHI2P12611 486 aa4.8□□□□□ -1.64
NMD3YHR170W CDC42P19073 191 aa4.8□□□□□ -1.64
NMD3YHR170W MRS6P32864 603 aaKnown RBP4.8□□□□□ -1.64
NMD3YHR170W LIP5P32875 414 aa4.8□□□□□ -1.64
NMD3YHR170W YKL050CP35736 922 aa4.8□□□□□ -1.64
NMD3YHR170W YBR071WP38243 211 aa4.8□□□□□ -1.64
NMD3YHR170W TCD1P38756 429 aa4.8□□□□□ -1.64
NMD3YHR170W GIC1P38785 314 aa4.8□□□□□ -1.64
NMD3YHR170W SMF1P38925 575 aa4.8□□□□□ -1.64
NMD3YHR170W HOS4P40480 1083 aa4.8□□□□□ -1.64
NMD3YHR170W SCD6P45978 349 aaKnown RBP RIP-Chip data4.8□□□□□ -1.64 RIP-Chip
NMD3YHR170W CPR7P47103 393 aa4.8□□□□□ -1.64
NMD3YHR170W NCS6P53088 359 aa4.8□□□□□ -1.64
NMD3YHR170W GPG1P53130 126 aa4.8□□□□□ -1.64
NMD3YHR170W SPC105P53148 917 aa4.8□□□□□ -1.64
NMD3YHR170W YNL034WP53963 612 aa4.8□□□□□ -1.64
NMD3YHR170W YNL018CP53976 612 aa4.8□□□□□ -1.64
NMD3YHR170W NGL3Q03210 505 aa4.8□□□□□ -1.64
NMD3YHR170W RRB1Q04225 511 aaKnown RBP4.8□□□□□ -1.64
NMD3YHR170W YDR278CQ05612 105 aa4.8□□□□□ -1.64
NMD3YHR170W IWR1Q07532 353 aaPredicted RBP4.8□□□□□ -1.64
NMD3YHR170W YPR071WQ12346 211 aa4.8□□□□□ -1.64
NMD3YHR170W GFA1P14742 717 aaKnown RBP4.79□□□□□ -1.64
NMD3YHR170W GFD2P25370 566 aaKnown RBP4.79□□□□□ -1.64
NMD3YHR170W RRT12P25381 491 aa4.79□□□□□ -1.64
NMD3YHR170W DPH2P32461 534 aa4.79□□□□□ -1.64
NMD3YHR170W SWI3P32591 825 aa4.79□□□□□ -1.64
NMD3YHR170W RPS0AP32905 252 aaKnown RBP4.79□□□□□ -1.64
NMD3YHR170W NDC80P40460 691 aa4.79□□□□□ -1.64
NMD3YHR170W CEP3P40969 608 aa4.79□□□□□ -1.64
NMD3YHR170W SMC3P47037 1230 aa4.79□□□□□ -1.64
NMD3YHR170W ZAP1P47043 880 aa4.79□□□□□ -1.64
NMD3YHR170W PRP31P49704 494 aaPredicted RBP4.79□□□□□ -1.64
NMD3YHR170W ESBP6P53918 673 aa4.79□□□□□ -1.64
NMD3YHR170W SRP1Q02821 542 aaKnown RBP4.79□□□□□ -1.64
NMD3YHR170W PPM1Q04081 328 aa4.79□□□□□ -1.64
NMD3YHR170W YDL177CQ12257 170 aa4.79□□□□□ -1.64
NMD3YHR170W RTP1Q12751 981 aa4.79□□□□□ -1.64
NMD3YHR170W CDC33P07260 213 aaKnown RBP4.78□□□□□ -1.64
NMD3YHR170W MSD1P15179 658 aaKnown RBP4.78□□□□□ -1.64
NMD3YHR170W RNR1P21524 888 aaKnown RBP4.78□□□□□ -1.64
NMD3YHR170W PRR1P28708 518 aa4.78□□□□□ -1.64
NMD3YHR170W MSS51P32335 436 aa4.78□□□□□ -1.64
NMD3YHR170W SSH4P32343 579 aa4.78□□□□□ -1.64
NMD3YHR170W HXT1P32465 570 aa4.78□□□□□ -1.64
NMD3YHR170W SRB4P32569 687 aa4.78□□□□□ -1.64
NMD3YHR170W GYP6P32806 458 aa4.78□□□□□ -1.64
NMD3YHR170W LRG1P35688 1017 aa4.78□□□□□ -1.64
NMD3YHR170W YRO2P38079 344 aa4.78□□□□□ -1.64
NMD3YHR170W MMS4P38257 691 aa4.78□□□□□ -1.64
NMD3YHR170W TSL1P38427 1098 aaKnown RBP4.78□□□□□ -1.64
NMD3YHR170W SFB2P53953 876 aa4.78□□□□□ -1.64
NMD3YHR170W VPS60Q03390 229 aa4.78□□□□□ -1.64
NMD3YHR170W GYL1Q04322 720 aa4.78□□□□□ -1.64
NMD3YHR170W YMR114CQ04471 368 aaKnown RBP4.78□□□□□ -1.64
NMD3YHR170W ECM7Q06200 448 aa4.78□□□□□ -1.64
NMD3YHR170W ABP140Q08641 628 aaKnown RBP4.78□□□□□ -1.64
NMD3YHR170W HFI1Q12060 488 aa4.78□□□□□ -1.64
NMD3YHR170W DAS2Q12084 232 aa4.78□□□□□ -1.64
NMD3YHR170W ADE8P04161 214 aa4.78□□□□□ -1.64
NMD3YHR170W ASP3-2P0CX77 362 aa4.78□□□□□ -1.64
NMD3YHR170W ASP3-3P0CX78 362 aa4.78□□□□□ -1.64
NMD3YHR170W ASP3-4P0CX79 362 aa4.78□□□□□ -1.64
NMD3YHR170W ASP3-1P0CZ17 362 aa4.78□□□□□ -1.64
NMD3YHR170W CKI1P20485 582 aa4.78□□□□□ -1.64
NMD3YHR170W PLC1P32383 869 aa4.78□□□□□ -1.64
NMD3YHR170W TFC3P34111 1160 aa4.78□□□□□ -1.64
NMD3YHR170W CSG2P35206 410 aa4.78□□□□□ -1.64
NMD3YHR170W DRE2P36152 348 aa4.78□□□□□ -1.64
NMD3YHR170W CBR1P38626 284 aaKnown RBP4.78□□□□□ -1.64
NMD3YHR170W TVP23P38962 199 aa4.78□□□□□ -1.64
NMD3YHR170W DSS1P39112 969 aa4.78□□□□□ -1.64
NMD3YHR170W GDH3P39708 457 aa4.78□□□□□ -1.64
NMD3YHR170W FTR1P40088 404 aa4.78□□□□□ -1.64
NMD3YHR170W SHE10P53075 577 aa4.78□□□□□ -1.64
NMD3YHR170W DRN1P53255 507 aaKnown RBP4.78□□□□□ -1.64
NMD3YHR170W RPA49Q01080 415 aaPredicted RBP4.78□□□□□ -1.64
NMD3YHR170W MUK1Q02866 612 aa4.78□□□□□ -1.64
NMD3YHR170W SNU56Q03782 492 aaKnown RBP4.78□□□□□ -1.64
NMD3YHR170W CDD1Q06549 142 aa4.78□□□□□ -1.64
NMD3YHR170W TSR1Q07381 788 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms