RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUP1-2	YHR055C	YML119W	Q03208	357 aa		4.59	□□□□□ -1.67
CUP1-2	YHR055C	SPN1	Q06505	410 aa	Predicted RBP	4.59	□□□□□ -1.67
CUP1-2	YHR055C	MLC2	Q06580	163 aa		4.59	□□□□□ -1.67
CUP1-2	YHR055C	CYK3	Q07533	885 aa		4.59	□□□□□ -1.67
CUP1-2	YHR055C	AMD2	P22580	549 aa		4.58	□□□□□ -1.68
CUP1-2	YHR055C	SWC3	P31376	625 aa		4.58	□□□□□ -1.68
CUP1-2	YHR055C	ARB1	P40024	610 aa	Known RBP	4.58	□□□□□ -1.68
CUP1-2	YHR055C	SAE2	P46946	345 aa		4.58	□□□□□ -1.68
CUP1-2	YHR055C	MAD3	P47074	515 aa		4.58	□□□□□ -1.68
CUP1-2	YHR055C	TEP1	P53916	434 aa		4.58	□□□□□ -1.68
CUP1-2	YHR055C	ERG13	P54839	491 aa	Known RBP	4.58	□□□□□ -1.68
CUP1-2	YHR055C	HRD3	Q05787	833 aa		4.58	□□□□□ -1.68
CUP1-2	YHR055C	NYV1	Q12255	253 aa		4.58	□□□□□ -1.68
CUP1-2	YHR055C	ARO9	P38840	513 aa	Predicted RBP	4.57	□□□□□ -1.68
CUP1-2	YHR055C	PSA1	P41940	361 aa	Known RBP	4.57	□□□□□ -1.68
CUP1-2	YHR055C	NMD5	P46970	1048 aa		4.57	□□□□□ -1.68
CUP1-2	YHR055C	PLM2	Q04383	521 aa		4.57	□□□□□ -1.68
CUP1-2	YHR055C	YML053C	Q04978	212 aa		4.57	□□□□□ -1.68
CUP1-2	YHR055C	TPO3	Q06451	622 aa		4.57	□□□□□ -1.68
CUP1-2	YHR055C	YDL242W	Q07746	117 aa		4.57	□□□□□ -1.68
CUP1-2	YHR055C	ATP4	P05626	244 aa		4.56	□□□□□ -1.68
CUP1-2	YHR055C	KGD2	P19262	463 aa	Predicted RBP	4.56	□□□□□ -1.68
CUP1-2	YHR055C	PDE1	P22434	369 aa		4.56	□□□□□ -1.68
CUP1-2	YHR055C	PTP2	P29461	750 aa		4.56	□□□□□ -1.68
CUP1-2	YHR055C	SIP1	P32578	815 aa		4.56	□□□□□ -1.68
CUP1-2	YHR055C	SAP1	P39955	897 aa	Known RBP	4.56	□□□□□ -1.68
CUP1-2	YHR055C	CAB2	P40506	365 aa		4.56	□□□□□ -1.68
CUP1-2	YHR055C	HIS6	P40545	261 aa		4.56	□□□□□ -1.68
CUP1-2	YHR055C	BST1	P43571	1029 aa		4.56	□□□□□ -1.68
CUP1-2	YHR055C	GLO1	P50107	326 aa		4.56	□□□□□ -1.68
CUP1-2	YHR055C	ESF2	P53743	316 aa	Known RBP	4.56	□□□□□ -1.68
CUP1-2	YHR055C	YPL108W	Q02872	168 aa	Predicted RBP	4.56	□□□□□ -1.68
CUP1-2	YHR055C	ARA2	Q04212	335 aa		4.56	□□□□□ -1.68
CUP1-2	YHR055C	AIM6	Q07716	390 aa		4.56	□□□□□ -1.68
CUP1-2	YHR055C	YOR389W	Q08912	624 aa		4.56	□□□□□ -1.68
CUP1-2	YHR055C	LCB4	Q12246	624 aa		4.56	□□□□□ -1.68
CUP1-2	YHR055C	FRE7	Q12333	620 aa		4.56	□□□□□ -1.68
CUP1-2	YHR055C	PNO1	Q99216	274 aa	Known RBP	4.56	□□□□□ -1.68
CUP1-2	YHR055C	GAL1	P04385	528 aa		4.55	□□□□□ -1.68
CUP1-2	YHR055C	YEF3	P16521	1044 aa	Known RBP	4.55	□□□□□ -1.68
CUP1-2	YHR055C	RRP43	P25359	394 aa	Predicted RBP	4.55	□□□□□ -1.68
CUP1-2	YHR055C	RPF2	P36160	344 aa	Known RBP	4.55	□□□□□ -1.68
CUP1-2	YHR055C	APM3	P38153	483 aa		4.55	□□□□□ -1.68
CUP1-2	YHR055C	STT3	P39007	718 aa	Known RBP	4.55	□□□□□ -1.68
CUP1-2	YHR055C	VPS27	P40343	622 aa	Known RBP	4.55	□□□□□ -1.68
CUP1-2	YHR055C	SNM1	P40993	198 aa		4.55	□□□□□ -1.68
CUP1-2	YHR055C	IDP3	P53982	420 aa	Known RBP	4.55	□□□□□ -1.68
CUP1-2	YHR055C	STP1	Q00947	519 aa		4.55	□□□□□ -1.68
CUP1-2	YHR055C	SIR1	P21691	654 aa		4.54	□□□□□ -1.68
CUP1-2	YHR055C	MSH1	P25846	959 aa		4.54	□□□□□ -1.68
CUP1-2	YHR055C	QRI7	P43122	407 aa		4.54	□□□□□ -1.68
CUP1-2	YHR055C	SEC5	P89102	971 aa		4.54	□□□□□ -1.68
CUP1-2	YHR055C	HIM1	Q06674	414 aa		4.54	□□□□□ -1.68
CUP1-2	YHR055C	PRS5	Q12265	496 aa	Known RBP	4.54	□□□□□ -1.68
CUP1-2	YHR055C	YLR111W	Q12528	110 aa		4.54	□□□□□ -1.68
CUP1-2	YHR055C	POL3	P15436	1097 aa		4.53	□□□□□ -1.68
CUP1-2	YHR055C	KES1	P35844	434 aa	Known RBP	4.53	□□□□□ -1.68
CUP1-2	YHR055C	FTH1	P38310	465 aa		4.53	□□□□□ -1.68
CUP1-2	YHR055C	VPS8	P39702	1274 aa		4.53	□□□□□ -1.68
CUP1-2	YHR055C	ATG21	Q02887	496 aa		4.53	□□□□□ -1.68
CUP1-2	YHR055C	RSC9	Q03124	581 aa		4.53	□□□□□ -1.68
CUP1-2	YHR055C	IWR1	Q07532	353 aa	Predicted RBP	4.53	□□□□□ -1.68
CUP1-2	YHR055C	YPL191C	Q08930	360 aa		4.53	□□□□□ -1.68
CUP1-2	YHR055C	YBR255C-A	Q3E776	120 aa		4.53	□□□□□ -1.68
CUP1-2	YHR055C	RTC1	Q08281	1341 aa		4.52	□□□□□ -1.69
CUP1-2	YHR055C	CET1	O13297	549 aa	Predicted RBP	4.52	□□□□□ -1.69
CUP1-2	YHR055C	PIF1	P07271	859 aa		4.52	□□□□□ -1.69
CUP1-2	YHR055C	ILV2	P07342	687 aa	Known RBP	4.52	□□□□□ -1.69
CUP1-2	YHR055C	ILS1	P09436	1072 aa	Known RBP	4.52	□□□□□ -1.69
CUP1-2	YHR055C	MIS1	P09440	975 aa	Known RBP	4.52	□□□□□ -1.69
CUP1-2	YHR055C	FRD1	P32614	470 aa	Known RBP	4.52	□□□□□ -1.69
CUP1-2	YHR055C	VBA2	P38358	474 aa	Known RBP	4.52	□□□□□ -1.69
CUP1-2	YHR055C	FAF1	P40546	346 aa	Predicted RBP	4.52	□□□□□ -1.69
CUP1-2	YHR055C	IRC7	P43623	340 aa		4.52	□□□□□ -1.69
CUP1-2	YHR055C	BRE1	Q07457	700 aa	Known RBP	4.52	□□□□□ -1.69
CUP1-2	YHR055C	ICL2	Q12031	575 aa		4.52	□□□□□ -1.69
CUP1-2	YHR055C	RRP6	Q12149	733 aa	Known RBP	4.52	□□□□□ -1.69
CUP1-2	YHR055C	ICT1	Q12385	394 aa		4.52	□□□□□ -1.69
CUP1-2	YHR055C	RIT1	P23796	513 aa		4.51	□□□□□ -1.69
CUP1-2	YHR055C	MCM3	P24279	971 aa	Known RBP	4.51	□□□□□ -1.69
CUP1-2	YHR055C	FUN12	P39730	1002 aa	Known RBP	4.51	□□□□□ -1.69
CUP1-2	YHR055C	NOP2	P40991	618 aa	Known RBP	4.51	□□□□□ -1.69
CUP1-2	YHR055C	SKP2	P42843	763 aa		4.51	□□□□□ -1.69
CUP1-2	YHR055C	PAP2	P53632	584 aa	Known RBP	4.51	□□□□□ -1.69
CUP1-2	YHR055C	SNU56	Q03782	492 aa	Known RBP	4.51	□□□□□ -1.69
CUP1-2	YHR055C	YAP7	Q08182	245 aa		4.51	□□□□□ -1.69
CUP1-2	YHR055C	Q0010	Q9ZZX9	128 aa		4.51	□□□□□ -1.69
CUP1-2	YHR055C	MSS18	P08593	268 aa		4.5	□□□□□ -1.69
CUP1-2	YHR055C	PHO81	P17442	1178 aa		4.5	□□□□□ -1.69
CUP1-2	YHR055C	GCD7	P32502	381 aa	Predicted RBP	4.5	□□□□□ -1.69
CUP1-2	YHR055C	TMT1	P32643	299 aa		4.5	□□□□□ -1.69
CUP1-2	YHR055C	GAT1	P43574	510 aa		4.5	□□□□□ -1.69
CUP1-2	YHR055C	MOT3	P54785	490 aa	Known RBP	4.5	□□□□□ -1.69
CUP1-2	YHR055C	YAT1	P80235	687 aa		4.5	□□□□□ -1.69
CUP1-2	YHR055C	YOL057W	Q08225	711 aa		4.5	□□□□□ -1.69
CUP1-2	YHR055C	ADE3	P07245	946 aa	Known RBP	4.49	□□□□□ -1.69
CUP1-2	YHR055C	SES1	P07284	462 aa	Known RBP	4.49	□□□□□ -1.69
CUP1-2	YHR055C	ERC1	P38767	581 aa		4.49	□□□□□ -1.69
CUP1-2	YHR055C	JHD1	P40034	492 aa		4.49	□□□□□ -1.69
CUP1-2	YHR055C	UBX6	P47049	396 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms