RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W APD1P38281 316 aa3.79□□□□□ -1.8
LOC1YFR001W LNP1P38878 278 aa3.79□□□□□ -1.8
LOC1YFR001W MAM1P40065 302 aa3.79□□□□□ -1.8
LOC1YFR001W RAD26P40352 1085 aa3.79□□□□□ -1.8
LOC1YFR001W BST1P43571 1029 aa3.79□□□□□ -1.8
LOC1YFR001W UBP16Q02863 499 aa3.79□□□□□ -1.8
LOC1YFR001W EIS1Q05050 843 aaKnown RBP3.79□□□□□ -1.8
LOC1YFR001W HIM1Q06674 414 aa3.79□□□□□ -1.8
LOC1YFR001W ICL2Q12031 575 aa3.79□□□□□ -1.8
LOC1YFR001W LCB4Q12246 624 aa3.79□□□□□ -1.8
LOC1YFR001W YER175W-AQ8TGU4 54 aa3.79□□□□□ -1.8
LOC1YFR001W YEF3P16521 1044 aaKnown RBP3.78□□□□□ -1.8
LOC1YFR001W KGD2P19262 463 aaPredicted RBP3.78□□□□□ -1.8
LOC1YFR001W RRP43P25359 394 aaPredicted RBP3.78□□□□□ -1.8
LOC1YFR001W MSH1P25846 959 aa3.78□□□□□ -1.8
LOC1YFR001W YHL041WP38730 149 aa3.78□□□□□ -1.8
LOC1YFR001W NOP2P40991 618 aaKnown RBP3.78□□□□□ -1.8
LOC1YFR001W COG2P53271 262 aa3.78□□□□□ -1.8
LOC1YFR001W ESF2P53743 316 aaKnown RBP3.78□□□□□ -1.8
LOC1YFR001W IOC4Q04213 475 aa3.78□□□□□ -1.8
LOC1YFR001W YDL242WQ07746 117 aa3.78□□□□□ -1.8
LOC1YFR001W RDL1Q12305 139 aaKnown RBP3.78□□□□□ -1.8
LOC1YFR001W FRE7Q12333 620 aa3.78□□□□□ -1.8
LOC1YFR001W PIF1P07271 859 aa3.77□□□□□ -1.81
LOC1YFR001W POL3P15436 1097 aa3.77□□□□□ -1.81
LOC1YFR001W MCM3P24279 971 aaKnown RBP3.77□□□□□ -1.81
LOC1YFR001W SPC72P39723 622 aa3.77□□□□□ -1.81
LOC1YFR001W CAB2P40506 365 aa3.77□□□□□ -1.81
LOC1YFR001W ATP23P53722 227 aa3.77□□□□□ -1.81
LOC1YFR001W YML053CQ04978 212 aa3.77□□□□□ -1.81
LOC1YFR001W SPN1Q06505 410 aaPredicted RBP3.77□□□□□ -1.81
LOC1YFR001W BSP1Q06604 576 aa3.77□□□□□ -1.81
LOC1YFR001W IRC3Q06683 689 aa3.77□□□□□ -1.81
LOC1YFR001W IWR1Q07532 353 aaPredicted RBP3.77□□□□□ -1.81
LOC1YFR001W CYK3Q07533 885 aa3.77□□□□□ -1.81
LOC1YFR001W SWI4P25302 1093 aaKnown RBP3.76□□□□□ -1.81
LOC1YFR001W BEM3P32873 1128 aa3.76□□□□□ -1.81
LOC1YFR001W SAP1P39955 897 aaKnown RBP3.76□□□□□ -1.81
LOC1YFR001W BNA3P47039 444 aaKnown RBP3.76□□□□□ -1.81
LOC1YFR001W CPR6P53691 371 aaKnown RBP3.76□□□□□ -1.81
LOC1YFR001W PLM2Q04383 521 aa3.76□□□□□ -1.81
LOC1YFR001W ORM2Q06144 216 aa3.76□□□□□ -1.81
LOC1YFR001W ADE3P07245 946 aaKnown RBP3.75□□□□□ -1.81
LOC1YFR001W SEC18P18759 758 aaKnown RBP3.75□□□□□ -1.81
LOC1YFR001W RIT1P23796 513 aa3.75□□□□□ -1.81
LOC1YFR001W VPS27P40343 622 aaKnown RBP3.75□□□□□ -1.81
LOC1YFR001W LTP1P40347 161 aa3.75□□□□□ -1.81
LOC1YFR001W XBP1P40489 647 aa3.75□□□□□ -1.81
LOC1YFR001W CIR1P42940 261 aa3.75□□□□□ -1.81
LOC1YFR001W NMD5P46970 1048 aa3.75□□□□□ -1.81
LOC1YFR001W YJR008WP47085 338 aa3.75□□□□□ -1.81
LOC1YFR001W BPL1P48445 690 aaPredicted RBP3.75□□□□□ -1.81
LOC1YFR001W YPL108WQ02872 168 aaPredicted RBP3.75□□□□□ -1.81
LOC1YFR001W ATG21Q02887 496 aa3.75□□□□□ -1.81
LOC1YFR001W YLR111WQ12528 110 aa3.75□□□□□ -1.81
LOC1YFR001W YBR255C-AQ3E776 120 aa3.75□□□□□ -1.81
LOC1YFR001W PNO1Q99216 274 aaKnown RBP3.75□□□□□ -1.81
LOC1YFR001W RTC1Q08281 1341 aa3.74□□□□□ -1.81
LOC1YFR001W BI2P03873 423 aa3.74□□□□□ -1.81
LOC1YFR001W MIS1P09440 975 aaKnown RBP3.74□□□□□ -1.81
LOC1YFR001W PDE1P22434 369 aa3.74□□□□□ -1.81
LOC1YFR001W MAK32P23060 363 aa3.74□□□□□ -1.81
LOC1YFR001W KES1P35844 434 aaKnown RBP3.74□□□□□ -1.81
LOC1YFR001W IMA1P53051 589 aa3.74□□□□□ -1.81
LOC1YFR001W PAP2P53632 584 aaKnown RBP3.74□□□□□ -1.81
LOC1YFR001W YNL058CP53947 316 aa3.74□□□□□ -1.81
LOC1YFR001W ARA2Q04212 335 aa3.74□□□□□ -1.81
LOC1YFR001W RAD34Q06665 692 aa3.74□□□□□ -1.81
LOC1YFR001W SUL2Q12325 893 aa3.74□□□□□ -1.81
LOC1YFR001W SES1P07284 462 aaKnown RBP3.73□□□□□ -1.81
LOC1YFR001W BIK1P11709 440 aa3.73□□□□□ -1.81
LOC1YFR001W PTP1P25044 335 aa3.73□□□□□ -1.81
LOC1YFR001W ARP2P32381 391 aaKnown RBP3.73□□□□□ -1.81
LOC1YFR001W RPF2P36160 344 aaKnown RBP3.73□□□□□ -1.81
LOC1YFR001W VBA2P38358 474 aaKnown RBP3.73□□□□□ -1.81
LOC1YFR001W ERC1P38767 581 aa3.73□□□□□ -1.81
LOC1YFR001W ACA1P39970 489 aa3.73□□□□□ -1.81
LOC1YFR001W RPT2P40327 437 aaKnown RBP3.73□□□□□ -1.81
LOC1YFR001W ULP2P40537 1034 aaPredicted RBP3.73□□□□□ -1.81
LOC1YFR001W UBX4P54730 416 aa3.73□□□□□ -1.81
LOC1YFR001W YPL071CQ02864 156 aa3.73□□□□□ -1.81
LOC1YFR001W YPL191CQ08930 360 aa3.73□□□□□ -1.81
LOC1YFR001W CET1O13297 549 aaPredicted RBP3.72□□□□□ -1.81
LOC1YFR001W PHO81P17442 1178 aa3.72□□□□□ -1.81
LOC1YFR001W URE2P23202 354 aaKnown RBP3.72□□□□□ -1.81
LOC1YFR001W SIP1P32578 815 aa3.72□□□□□ -1.81
LOC1YFR001W YBR138CP38277 524 aa3.72□□□□□ -1.81
LOC1YFR001W IMD2P38697 523 aaKnown RBP3.72□□□□□ -1.81
LOC1YFR001W PUG1P40100 303 aa3.72□□□□□ -1.81
LOC1YFR001W IMD3P50095 523 aaKnown RBP3.72□□□□□ -1.81
LOC1YFR001W IDP3P53982 420 aaKnown RBP3.72□□□□□ -1.81
LOC1YFR001W YAT1P80235 687 aa3.72□□□□□ -1.81
LOC1YFR001W AAT1Q01802 451 aa3.72□□□□□ -1.81
LOC1YFR001W RSC9Q03124 581 aa3.72□□□□□ -1.81
LOC1YFR001W TPO3Q06451 622 aa3.72□□□□□ -1.81
LOC1YFR001W LYS21Q12122 440 aaKnown RBP3.72□□□□□ -1.81
LOC1YFR001W PRS5Q12265 496 aaKnown RBP3.72□□□□□ -1.81
LOC1YFR001W PET122P10355 254 aa3.71□□□□□ -1.82
LOC1YFR001W PGI1P12709 554 aaKnown RBP3.71□□□□□ -1.82
LOC1YFR001W APA1P16550 321 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms