RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C VPS45P38932 577 aa6.85□□□□□ -1.31
SHO1YER118C RGI2P40188 164 aa6.85□□□□□ -1.31
SHO1YER118C MKT1P40850 830 aaKnown RBP6.85□□□□□ -1.31
SHO1YER118C AIP1P46680 615 aaKnown RBP6.85□□□□□ -1.31
SHO1YER118C TCB2P48231 1178 aa6.85□□□□□ -1.31
SHO1YER118C CLA4P48562 842 aa6.85□□□□□ -1.31
SHO1YER118C TAF4P50105 388 aa6.85□□□□□ -1.31
SHO1YER118C HST3P53687 447 aa6.85□□□□□ -1.31
SHO1YER118C TY2A-DR2Q03483 438 aa6.85□□□□□ -1.31
SHO1YER118C SPH1Q06160 661 aa6.85□□□□□ -1.31
SHO1YER118C YLR456WQ06199 204 aa6.85□□□□□ -1.31
SHO1YER118C GPB1Q08886 897 aa6.85□□□□□ -1.31
SHO1YER118C TY2A-BQ12260 438 aa6.85□□□□□ -1.31
SHO1YER118C TY2A-OR2Q12293 438 aa6.85□□□□□ -1.31
SHO1YER118C TY2A-DR1Q12392 438 aa6.85□□□□□ -1.31
SHO1YER118C TY2A-OR1Q12439 438 aa6.85□□□□□ -1.31
SHO1YER118C TY2A-DR3Q99303 438 aa6.85□□□□□ -1.31
SHO1YER118C COQ4O13525 335 aa6.84□□□□□ -1.31
SHO1YER118C YML002WP0CF17 737 aa6.84□□□□□ -1.31
SHO1YER118C KAR3P17119 729 aa6.84□□□□□ -1.31
SHO1YER118C CPR2P23285 205 aa6.84□□□□□ -1.31
SHO1YER118C ASH1P34233 588 aa6.84□□□□□ -1.31
SHO1YER118C DAD2P36162 133 aa6.84□□□□□ -1.31
SHO1YER118C HSM3P38348 480 aa6.84□□□□□ -1.31
SHO1YER118C YHR097CP38809 366 aaKnown RBP6.84□□□□□ -1.31
SHO1YER118C SPT8P38915 602 aa6.84□□□□□ -1.31
SHO1YER118C PFK26P40433 827 aaKnown RBP6.84□□□□□ -1.31
SHO1YER118C MET28P40573 187 aa6.84□□□□□ -1.31
SHO1YER118C GSM1P42950 618 aa6.84□□□□□ -1.31
SHO1YER118C AGX1P43567 385 aa6.84□□□□□ -1.31
SHO1YER118C GLO1P50107 326 aa6.84□□□□□ -1.31
SHO1YER118C VPS4P52917 437 aa6.84□□□□□ -1.31
SHO1YER118C RAI1P53063 387 aaKnown RBP6.84□□□□□ -1.31
SHO1YER118C SQS1P53866 767 aaKnown RBP6.84□□□□□ -1.31
SHO1YER118C TY1A-DR2Q03964 440 aaKnown RBP6.84□□□□□ -1.31
SHO1YER118C DOT1Q04089 582 aaKnown RBP6.84□□□□□ -1.31
SHO1YER118C LUC7Q07508 261 aaPredicted RBP6.84□□□□□ -1.31
SHO1YER118C CET1O13297 549 aaPredicted RBP6.83□□□□□ -1.32
SHO1YER118C PHO84P25297 587 aaKnown RBP6.83□□□□□ -1.32
SHO1YER118C MTC7P32633 139 aa6.83□□□□□ -1.32
SHO1YER118C VPS17P32913 551 aa6.83□□□□□ -1.32
SHO1YER118C REG2P38232 338 aa6.83□□□□□ -1.32
SHO1YER118C LAM5P43560 674 aa6.83□□□□□ -1.32
SHO1YER118C AAD10P47182 288 aa6.83□□□□□ -1.32
SHO1YER118C RRN5Q02983 363 aa6.83□□□□□ -1.32
SHO1YER118C RCR2Q03446 210 aaKnown RBP6.83□□□□□ -1.32
SHO1YER118C RBA50Q04418 439 aa6.83□□□□□ -1.32
SHO1YER118C VBA4Q04602 768 aaKnown RBP6.83□□□□□ -1.32
SHO1YER118C DON1Q05610 365 aa6.83□□□□□ -1.32
SHO1YER118C MMR1Q06324 491 aa6.83□□□□□ -1.32
SHO1YER118C VAM6Q07468 1049 aa6.83□□□□□ -1.32
SHO1YER118C XYL2Q07993 356 aa6.83□□□□□ -1.32
SHO1YER118C RCL1Q08096 367 aaPredicted RBP6.83□□□□□ -1.32
SHO1YER118C YOR223WQ12015 292 aa6.83□□□□□ -1.32
SHO1YER118C ICL2Q12031 575 aa6.83□□□□□ -1.32
SHO1YER118C RTC5Q12108 567 aaKnown RBP6.83□□□□□ -1.32
SHO1YER118C UPC2Q12151 913 aa6.83□□□□□ -1.32
SHO1YER118C RPN5Q12250 445 aaKnown RBP6.83□□□□□ -1.32
SHO1YER118C ISN1Q99312 450 aa6.83□□□□□ -1.32
SHO1YER118C SAC7P17121 654 aa6.82□□□□□ -1.32
SHO1YER118C PET123P17558 318 aa6.82□□□□□ -1.32
SHO1YER118C HNM1P19807 563 aa6.82□□□□□ -1.32
SHO1YER118C PET127P32606 800 aa6.82□□□□□ -1.32
SHO1YER118C ADH5P38113 351 aaKnown RBP6.82□□□□□ -1.32
SHO1YER118C YHR054CP38780 354 aa6.82□□□□□ -1.32
SHO1YER118C MPT5P39016 859 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
SHO1YER118C TED1P40533 473 aa6.82□□□□□ -1.32
SHO1YER118C YIR007WP40566 764 aa6.82□□□□□ -1.32
SHO1YER118C SHE4P51534 789 aa6.82□□□□□ -1.32
SHO1YER118C SDH1Q00711 640 aa6.82□□□□□ -1.32
SHO1YER118C EFR3Q03653 782 aaKnown RBP6.82□□□□□ -1.32
SHO1YER118C ADY4Q05955 493 aa6.82□□□□□ -1.32
SHO1YER118C SUL2Q12325 893 aa6.82□□□□□ -1.32
SHO1YER118C DBP3P20447 523 aaKnown RBP6.81□□□□□ -1.32
SHO1YER118C GRR1P24814 1151 aa6.81□□□□□ -1.32
SHO1YER118C ERV1P27882 189 aa6.81□□□□□ -1.32
SHO1YER118C PAP1P29468 568 aaKnown RBP6.81□□□□□ -1.32
SHO1YER118C ALY1P36117 915 aa6.81□□□□□ -1.32
SHO1YER118C CDS1P38221 457 aa6.81□□□□□ -1.32
SHO1YER118C VID24P38263 362 aa6.81□□□□□ -1.32
SHO1YER118C MUP3P38734 546 aa6.81□□□□□ -1.32
SHO1YER118C MEF2P39677 819 aa6.81□□□□□ -1.32
SHO1YER118C ARB1P40024 610 aaKnown RBP6.81□□□□□ -1.32
SHO1YER118C MRX1P40050 688 aa6.81□□□□□ -1.32
SHO1YER118C GID8P40208 455 aa6.81□□□□□ -1.32
SHO1YER118C YIL108WP40483 696 aaKnown RBP6.81□□□□□ -1.32
SHO1YER118C TAH11P47112 604 aa6.81□□□□□ -1.32
SHO1YER118C NUP84P52891 726 aa6.81□□□□□ -1.32
SHO1YER118C MDR1P53258 950 aa6.81□□□□□ -1.32
SHO1YER118C TPP1Q03796 238 aa6.81□□□□□ -1.32
SHO1YER118C ROY1Q04847 553 aa6.81□□□□□ -1.32
SHO1YER118C RIX7Q07844 837 aaKnown RBP6.81□□□□□ -1.32
SHO1YER118C PML1Q07930 204 aaPredicted RBP6.81□□□□□ -1.32
SHO1YER118C HER1Q12276 1246 aa6.81□□□□□ -1.32
SHO1YER118C AFI1Q99222 893 aa6.81□□□□□ -1.32
SHO1YER118C HMG2P12684 1045 aa6.8□□□□□ -1.32
SHO1YER118C HOM2P13663 365 aaKnown RBP6.8□□□□□ -1.32
SHO1YER118C FRS1P15624 595 aaKnown RBP6.8□□□□□ -1.32
SHO1YER118C FPS1P23900 669 aa6.8□□□□□ -1.32
SHO1YER118C ERG8P24521 451 aa6.8□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms