RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C ELO3P40319 345 aa1.46□□□□□ -2.18
SWI4YER111C CTF18P49956 741 aa1.46□□□□□ -2.18
SWI4YER111C RRT6P53117 311 aaPredicted RBP1.46□□□□□ -2.18
SWI4YER111C BSC5P53755 489 aa1.46□□□□□ -2.18
SWI4YER111C REG1Q00816 1014 aa1.46□□□□□ -2.18
SWI4YER111C TRS31Q03337 283 aa1.46□□□□□ -2.18
SWI4YER111C FRE5Q08908 694 aa1.46□□□□□ -2.18
SWI4YER111C PNO1Q99216 274 aaKnown RBP1.46□□□□□ -2.18
SWI4YER111C YCR015CP25616 317 aa1.46□□□□□ -2.18
SWI4YER111C DCG1P32460 244 aa1.46□□□□□ -2.18
SWI4YER111C PAH1P32567 862 aa1.46□□□□□ -2.18
SWI4YER111C MTC7P32633 139 aa1.46□□□□□ -2.18
SWI4YER111C NPR3P38742 1146 aa1.46□□□□□ -2.18
SWI4YER111C YHR097CP38809 366 aaKnown RBP1.46□□□□□ -2.18
SWI4YER111C YIL161WP40449 235 aaKnown RBP1.46□□□□□ -2.18
SWI4YER111C ESL1P40456 1118 aa1.46□□□□□ -2.18
SWI4YER111C IST3P40565 148 aaPredicted RBP1.46□□□□□ -2.18
SWI4YER111C POL31P46957 487 aa1.46□□□□□ -2.18
SWI4YER111C BNA1P47096 177 aa1.46□□□□□ -2.18
SWI4YER111C PAN2P53010 1115 aaPredicted RBP1.46□□□□□ -2.18
SWI4YER111C RIM8P53179 542 aa1.46□□□□□ -2.18
SWI4YER111C NMA2P53204 395 aa1.46□□□□□ -2.18
SWI4YER111C YGR054WP53235 642 aaKnown RBP1.46□□□□□ -2.18
SWI4YER111C MDG1P53885 366 aa1.46□□□□□ -2.18
SWI4YER111C FDC1Q03034 503 aa1.46□□□□□ -2.18
SWI4YER111C FCP1Q03254 732 aa1.46□□□□□ -2.18
SWI4YER111C CLU1Q03690 1277 aaKnown RBP1.46□□□□□ -2.18
SWI4YER111C YMR206WQ03695 313 aa1.46□□□□□ -2.18
SWI4YER111C CRF1Q04930 467 aa1.46□□□□□ -2.18
SWI4YER111C VIP1Q06685 1146 aaKnown RBP1.46□□□□□ -2.18
SWI4YER111C YPL216WQ08964 1102 aa1.46□□□□□ -2.18
SWI4YER111C NUS1Q12063 375 aa1.46□□□□□ -2.18
SWI4YER111C RTP1Q12751 981 aa1.46□□□□□ -2.18
SWI4YER111C YBR126W-AQ8TGU7 68 aa1.46□□□□□ -2.18
SWI4YER111C MMS22Q06164 1454 aa1.46□□□□□ -2.18
SWI4YER111C SEC53P07283 254 aaKnown RBP1.46□□□□□ -2.18
SWI4YER111C CDC6P09119 513 aa1.46□□□□□ -2.18
SWI4YER111C VPS33P20795 691 aa1.46□□□□□ -2.18
SWI4YER111C PRP28P23394 588 aa1.46□□□□□ -2.18
SWI4YER111C ERG4P25340 473 aa1.46□□□□□ -2.18
SWI4YER111C SIP1P32578 815 aa1.46□□□□□ -2.18
SWI4YER111C DHR2P36009 735 aaPredicted RBP1.46□□□□□ -2.18
SWI4YER111C SUL1P38359 859 aa1.46□□□□□ -2.18
SWI4YER111C THI6P41835 540 aa1.46□□□□□ -2.18
SWI4YER111C SRB7P47822 140 aa1.46□□□□□ -2.18
SWI4YER111C PUS4P48567 403 aaKnown RBP1.46□□□□□ -2.18
SWI4YER111C MNN10P50108 393 aaKnown RBP1.46□□□□□ -2.18
SWI4YER111C PSP1P50896 841 aaKnown RBP1.46□□□□□ -2.18
SWI4YER111C TRS23Q03784 219 aa1.46□□□□□ -2.18
SWI4YER111C SYF1Q04048 859 aaPredicted RBP1.46□□□□□ -2.18
SWI4YER111C GSF2Q04697 403 aaKnown RBP1.46□□□□□ -2.18
SWI4YER111C YLR287CQ05881 355 aa1.46□□□□□ -2.18
SWI4YER111C TMA16Q08687 178 aa1.46□□□□□ -2.18
SWI4YER111C USV1Q12132 391 aa1.46□□□□□ -2.18
SWI4YER111C RVB2Q12464 471 aaKnown RBP1.46□□□□□ -2.18
SWI4YER111C YKL033W-AQ86ZR7 236 aa1.46□□□□□ -2.18
SWI4YER111C YPK1P12688 680 aaKnown RBP1.45□□□□□ -2.18
SWI4YER111C HSC82P15108 705 aaKnown RBP1.45□□□□□ -2.18
SWI4YER111C HRR25P29295 494 aaKnown RBP1.45□□□□□ -2.18
SWI4YER111C PXA2P34230 853 aa1.45□□□□□ -2.18
SWI4YER111C BLI1P35727 113 aa1.45□□□□□ -2.18
SWI4YER111C PHO11P35842 467 aa1.45□□□□□ -2.18
SWI4YER111C APL3P38065 1025 aa1.45□□□□□ -2.18
SWI4YER111C PHO12P38693 467 aa1.45□□□□□ -2.18
SWI4YER111C BCD1P38772 366 aa1.45□□□□□ -2.18
SWI4YER111C MPT5P39016 859 aaKnown RBP RIP-Chip data1.45□□□□□ -2.18not detected
SWI4YER111C NOP16P40007 231 aaKnown RBP1.45□□□□□ -2.18
SWI4YER111C ARB1P40024 610 aaKnown RBP1.45□□□□□ -2.18
SWI4YER111C UBP7P40453 1071 aa1.45□□□□□ -2.18
SWI4YER111C ARF3P40994 183 aaRIP-Chip data1.45□□□□□ -2.18not detected
SWI4YER111C SPC98P53540 846 aa1.45□□□□□ -2.18
SWI4YER111C AAT1Q01802 451 aa1.45□□□□□ -2.18
SWI4YER111C TDA9Q04545 1251 aa1.45□□□□□ -2.18
SWI4YER111C MFB1Q04922 465 aa1.45□□□□□ -2.18
SWI4YER111C RGC1Q06108 1083 aaKnown RBP1.45□□□□□ -2.18
SWI4YER111C GDB1Q06625 1536 aa1.45□□□□□ -2.18
SWI4YER111C YLR358CO13565 187 aa1.45□□□□□ -2.18
SWI4YER111C ALG7P07286 448 aa1.45□□□□□ -2.18
SWI4YER111C TY2A-LR1P0C2J4 438 aa1.45□□□□□ -2.18
SWI4YER111C TY2A-FP0CX61 438 aa1.45□□□□□ -2.18
SWI4YER111C TY2A-GR2P0CX62 438 aa1.45□□□□□ -2.18
SWI4YER111C CDC24P11433 854 aaPredicted RBP1.45□□□□□ -2.18
SWI4YER111C TY2A-CP25383 438 aa1.45□□□□□ -2.18
SWI4YER111C LST4P34239 828 aa1.45□□□□□ -2.18
SWI4YER111C RFC1P38630 861 aaKnown RBP1.45□□□□□ -2.18
SWI4YER111C HOS4P40480 1083 aa1.45□□□□□ -2.18
SWI4YER111C YDL183CP48569 320 aa1.45□□□□□ -2.18
SWI4YER111C UBC11P52492 156 aa1.45□□□□□ -2.18
SWI4YER111C COS12P53053 380 aa1.45□□□□□ -2.18
SWI4YER111C DUO1P53168 247 aaKnown RBP1.45□□□□□ -2.18
SWI4YER111C YGR151CP53287 111 aa1.45□□□□□ -2.18
SWI4YER111C DIP5P53388 608 aa1.45□□□□□ -2.18
SWI4YER111C TY2A-DR2Q03483 438 aa1.45□□□□□ -2.18
SWI4YER111C YDR132CQ03900 495 aa1.45□□□□□ -2.18
SWI4YER111C ADY4Q05955 493 aa1.45□□□□□ -2.18
SWI4YER111C TY2A-BQ12260 438 aa1.45□□□□□ -2.18
SWI4YER111C TY2A-OR2Q12293 438 aa1.45□□□□□ -2.18
SWI4YER111C SUL2Q12325 893 aa1.45□□□□□ -2.18
SWI4YER111C TY2A-DR1Q12392 438 aa1.45□□□□□ -2.18
SWI4YER111C TY2A-OR1Q12439 438 aa1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms