RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeastyeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPR28YDR218C YLR464WP0CX17 216 aa4.89□□□□□ -1.63
SPR28YDR218C CDC24P11433 854 aaPredicted RBP4.89□□□□□ -1.63
SPR28YDR218C GLN4P13188 809 aaKnown RBP4.89□□□□□ -1.63
SPR28YDR218C HOM2P13663 365 aaKnown RBP4.89□□□□□ -1.63
SPR28YDR218C CLB3P24870 427 aa4.89□□□□□ -1.63
SPR28YDR218C SPB1P25582 841 aaPredicted RBP4.89□□□□□ -1.63
SPR28YDR218C LOT5P34234 306 aa4.89□□□□□ -1.63
SPR28YDR218C YKR018CP36114 725 aa4.89□□□□□ -1.63
SPR28YDR218C UIP5P36137 443 aa4.89□□□□□ -1.63
SPR28YDR218C YEL076CP39971 216 aa4.89□□□□□ -1.63
SPR28YDR218C MDE1P47095 244 aa4.89□□□□□ -1.63
SPR28YDR218C KEL2P50090 882 aa4.89□□□□□ -1.63
SPR28YDR218C YGR250CP53316 781 aaKnown RBP4.89□□□□□ -1.63
SPR28YDR218C RNH1Q04740 348 aa4.89□□□□□ -1.63
SPR28YDR218C CDC45Q08032 650 aa4.89□□□□□ -1.63
SPR28YDR218C RCN2Q12044 265 aa4.89□□□□□ -1.63
SPR28YDR218C PCD1Q12524 340 aa4.89□□□□□ -1.63
SPR28YDR218C PRC1P00729 532 aa4.88□□□□□ -1.63
SPR28YDR218C SWI6P09959 803 aa4.88□□□□□ -1.63
SPR28YDR218C RNA1P11745 407 aaKnown RBP4.88□□□□□ -1.63
SPR28YDR218C SIR1P21691 654 aa4.88□□□□□ -1.63
SPR28YDR218C CAD1P24813 409 aaKnown RBP4.88□□□□□ -1.63
SPR28YDR218C DAL80P26343 269 aa4.88□□□□□ -1.63
SPR28YDR218C RPC82P32349 654 aa4.88□□□□□ -1.63
SPR28YDR218C HXT4P32467 576 aa4.88□□□□□ -1.63
SPR28YDR218C STE13P33894 931 aa4.88□□□□□ -1.63
SPR28YDR218C YHR131CP38835 850 aa4.88□□□□□ -1.63
SPR28YDR218C BFR1P38934 470 aaKnown RBP RIP-Chip data4.88□□□□□ -1.63not detected
SPR28YDR218C SPO22P40511 975 aa4.88□□□□□ -1.63
SPR28YDR218C BUD27P43573 796 aaKnown RBP RIP-Chip data4.88□□□□□ -1.63not detected
SPR28YDR218C IRC5P43610 853 aa4.88□□□□□ -1.63
SPR28YDR218C HXT16P47185 567 aa4.88□□□□□ -1.63
SPR28YDR218C YKE2P52553 114 aa4.88□□□□□ -1.63
SPR28YDR218C RAI1P53063 387 aaKnown RBP4.88□□□□□ -1.63
SPR28YDR218C RRT6P53117 311 aaPredicted RBP4.88□□□□□ -1.63
SPR28YDR218C SGF73P53165 657 aa4.88□□□□□ -1.63
SPR28YDR218C VPS75P53853 264 aa4.88□□□□□ -1.63
SPR28YDR218C NOP15P53927 220 aaPredicted RBP4.88□□□□□ -1.63
SPR28YDR218C OAZ1Q02803 292 aa4.88□□□□□ -1.63
SPR28YDR218C YMR210WQ03649 449 aa4.88□□□□□ -1.63
SPR28YDR218C YDR131CQ03899 556 aa4.88□□□□□ -1.63
SPR28YDR218C LRS4Q04087 347 aaKnown RBP4.88□□□□□ -1.63
SPR28YDR218C YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.88□□□□□ -1.63not detected
SPR28YDR218C CHD1P32657 1468 aa4.88□□□□□ -1.63
SPR28YDR218C PRP28P23394 588 aa4.87□□□□□ -1.63
SPR28YDR218C GRR1P24814 1151 aa4.87□□□□□ -1.63
SPR28YDR218C LAS1P36146 502 aaPredicted RBP4.87□□□□□ -1.63
SPR28YDR218C ESL2P36168 1195 aa4.87□□□□□ -1.63
SPR28YDR218C SUL1P38359 859 aa4.87□□□□□ -1.63
SPR28YDR218C MTG2P38860 518 aa4.87□□□□□ -1.63
SPR28YDR218C RTS1P38903 757 aa4.87□□□□□ -1.63
SPR28YDR218C VPS45P38932 577 aa4.87□□□□□ -1.63
SPR28YDR218C VPS41P38959 992 aa4.87□□□□□ -1.63
SPR28YDR218C ARC1P46672 376 aaKnown RBP4.87□□□□□ -1.63
SPR28YDR218C YJR039WP47107 1121 aa4.87□□□□□ -1.63
SPR28YDR218C MNP1P53163 194 aaPredicted RBP4.87□□□□□ -1.63
SPR28YDR218C PUS2P53167 370 aa4.87□□□□□ -1.63
SPR28YDR218C ERG5P54781 538 aa4.87□□□□□ -1.63
SPR28YDR218C YPL107WQ02873 248 aa4.87□□□□□ -1.63
SPR28YDR218C ERB1Q04660 807 aaKnown RBP4.87□□□□□ -1.63
SPR28YDR218C SSL1Q04673 461 aaPredicted RBP4.87□□□□□ -1.63
SPR28YDR218C YPR172WQ06608 200 aa4.87□□□□□ -1.63
SPR28YDR218C CTI6Q08923 506 aa4.87□□□□□ -1.63
SPR28YDR218C SEC39Q12745 709 aa4.87□□□□□ -1.63
SPR28YDR218C YBR182C-AQ8TGU6 64 aa4.87□□□□□ -1.63
SPR28YDR218C YML002WP0CF17 737 aa4.86□□□□□ -1.63
SPR28YDR218C THR1P17423 357 aaKnown RBP4.86□□□□□ -1.63
SPR28YDR218C MDH1P17505 334 aaKnown RBP RIP-Chip data4.86□□□□□ -1.63not detected
SPR28YDR218C CLB1P24868 471 aa4.86□□□□□ -1.63
SPR28YDR218C ADK2P26364 225 aa4.86□□□□□ -1.63
SPR28YDR218C TFB1P32776 642 aa4.86□□□□□ -1.63
SPR28YDR218C GCS1P35197 352 aa4.86□□□□□ -1.63
SPR28YDR218C PIL1P53252 339 aaKnown RBP4.86□□□□□ -1.63
SPR28YDR218C ORC4P54791 529 aa4.86□□□□□ -1.63
SPR28YDR218C SSL2Q00578 843 aa4.86□□□□□ -1.63
SPR28YDR218C TRI1Q05024 226 aa4.86□□□□□ -1.63
SPR28YDR218C RSF1Q05043 376 aa4.86□□□□□ -1.63
SPR28YDR218C LYS21Q12122 440 aaKnown RBP4.86□□□□□ -1.63
SPR28YDR218C HOS1Q12214 470 aa4.86□□□□□ -1.63
SPR28YDR218C RPS17AP02407 136 aaKnown RBP4.85□□□□□ -1.63
SPR28YDR218C NOT3P06102 836 aaKnown RBP4.85□□□□□ -1.63
SPR28YDR218C TRP4P07285 380 aaPredicted RBP4.85□□□□□ -1.63
SPR28YDR218C RPS17BP14127 136 aaKnown RBP4.85□□□□□ -1.63
SPR28YDR218C ACO1P19414 778 aaKnown RBP RIP-Chip data4.85□□□□□ -1.63not detected
SPR28YDR218C RIT1P23796 513 aa4.85□□□□□ -1.63
SPR28YDR218C ERG4P25340 473 aa4.85□□□□□ -1.63
SPR28YDR218C YCL002CP25565 263 aa4.85□□□□□ -1.63
SPR28YDR218C IMG2P25642 146 aaPredicted RBP4.85□□□□□ -1.63
SPR28YDR218C NIP1P32497 812 aaKnown RBP4.85□□□□□ -1.63
SPR28YDR218C NIP100P33420 868 aa4.85□□□□□ -1.63
SPR28YDR218C STB6P36085 766 aa4.85□□□□□ -1.63
SPR28YDR218C SET3P36124 751 aa4.85□□□□□ -1.63
SPR28YDR218C YBR138CP38277 524 aa4.85□□□□□ -1.63
SPR28YDR218C FSH1P38777 243 aaKnown RBP4.85□□□□□ -1.63
SPR28YDR218C LTP1P40347 161 aa4.85□□□□□ -1.63
SPR28YDR218C ATF1P40353 525 aa4.85□□□□□ -1.63
SPR28YDR218C CEP3P40969 608 aa4.85□□□□□ -1.63
SPR28YDR218C THI6P41835 540 aa4.85□□□□□ -1.63
SPR28YDR218C ZIM17P42844 174 aa4.85□□□□□ -1.63
SPR28YDR218C PSP1P50896 841 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms