RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	NUP2	P32499	720 aa		4.09	□□□□□ -1.76
VMA1	YDL185W	SPR1	P32603	445 aa		4.09	□□□□□ -1.76
VMA1	YDL185W	SRP101	P32916	621 aa		4.09	□□□□□ -1.76
VMA1	YDL185W	RRN3	P36070	627 aa		4.09	□□□□□ -1.76
VMA1	YDL185W	RDH54	P38086	958 aa		4.09	□□□□□ -1.76
VMA1	YDL185W	YJR061W	P40355	935 aa		4.09	□□□□□ -1.76
VMA1	YDL185W	MSS2	P40990	351 aa		4.09	□□□□□ -1.76
VMA1	YDL185W	YJL181W	P46987	611 aa		4.09	□□□□□ -1.76
VMA1	YDL185W	BPL1	P48445	690 aa	Predicted RBP	4.09	□□□□□ -1.76
VMA1	YDL185W	DIE2	P50076	525 aa		4.09	□□□□□ -1.76
VMA1	YDL185W	KTR5	P53966	522 aa	Predicted RBP	4.09	□□□□□ -1.76
VMA1	YDL185W	SEN54	Q02825	467 aa	Predicted RBP	4.09	□□□□□ -1.76
VMA1	YDL185W	FRK1	Q03002	865 aa	Predicted RBP	4.09	□□□□□ -1.76
VMA1	YDL185W	UFO1	Q04511	668 aa		4.09	□□□□□ -1.76
VMA1	YDL185W	YDR222W	Q04925	415 aa		4.09	□□□□□ -1.76
VMA1	YDL185W	YPR196W	Q06595	470 aa		4.09	□□□□□ -1.76
VMA1	YDL185W	REH1	Q06709	432 aa		4.09	□□□□□ -1.76
VMA1	YDL185W	FLC1	Q08967	793 aa		4.09	□□□□□ -1.76
VMA1	YDL185W	HER1	Q12276	1246 aa		4.09	□□□□□ -1.76
VMA1	YDL185W	MED1	Q12321	566 aa		4.09	□□□□□ -1.76
VMA1	YDL185W	HRT3	Q12347	344 aa		4.09	□□□□□ -1.76
VMA1	YDL185W	FKS1	P38631	1876 aa	Known RBP	4.09	□□□□□ -1.76
VMA1	YDL185W	RAP1	P11938	827 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	CMK2	P22517	447 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	PEX3	P28795	441 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	CYS4	P32582	507 aa	Known RBP	4.08	□□□□□ -1.76
VMA1	YDL185W	RIM2	P38127	377 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	SDH8	P38345	138 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	GPB2	P39717	880 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	VHR1	P40522	640 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	GCD10	P41814	478 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	FET5	P43561	622 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	ORC5	P50874	479 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	NOP19	P53317	196 aa	Predicted RBP	4.08	□□□□□ -1.76
VMA1	YDL185W	CWC25	P53854	179 aa	Known RBP	4.08	□□□□□ -1.76
VMA1	YDL185W	DPH6	Q12429	685 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	ARP6	Q12509	438 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	YBR298C-A	Q8TGK4	73 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	PUT2	P07275	575 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	RAD18	P10862	487 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	PHO81	P17442	1178 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	VMA6	P32366	345 aa	Known RBP	4.08	□□□□□ -1.76
VMA1	YDL185W	NGR1	P32831	672 aa	Known RBP	4.08	□□□□□ -1.76
VMA1	YDL185W	IMP3	P32899	183 aa	Predicted RBP	4.08	□□□□□ -1.76
VMA1	YDL185W	MDJ1	P35191	511 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	MSR1	P38714	643 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	ORC6	P38826	435 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	LSM12	P38828	187 aa	Known RBP	4.08	□□□□□ -1.76
VMA1	YDL185W	SER3	P40054	469 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	MNN11	P46985	422 aa	Known RBP	4.08	□□□□□ -1.76
VMA1	YDL185W	RAI1	P53063	387 aa	Known RBP	4.08	□□□□□ -1.76
VMA1	YDL185W	SDH1	Q00711	640 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	EMI2	Q04409	500 aa	Known RBP	4.08	□□□□□ -1.76
VMA1	YDL185W	YMR226C	Q05016	267 aa	Known RBP	4.08	□□□□□ -1.76
VMA1	YDL185W	PEX10	Q05568	337 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	YCS4	Q06156	1176 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	ARR2	Q06597	130 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	THI3	Q07471	609 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	GTT2	Q12390	233 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	LSO2	Q3E772	92 aa	Known RBP	4.08	□□□□□ -1.76
VMA1	YDL185W	HMG1	P12683	1054 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	TOP3	P13099	656 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	CBS2	P14905	389 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	PEX1	P24004	1043 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	ADP1	P25371	1049 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	CDC20	P26309	610 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	CRM1	P30822	1084 aa	Known RBP	4.08	□□□□□ -1.76
VMA1	YDL185W	KRE29	P40026	464 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	YRB2	P40517	327 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	YGR210C	P42942	411 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	YFH7	P43591	353 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	YGR111W	P53265	400 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	YNR063W	P53749	607 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	DLT1	Q04216	342 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	YDL073W	Q07454	984 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	LOT6	Q07923	191 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	YLR031W	Q07978	186 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	MED2	Q12124	431 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	HSP42	Q12329	375 aa		4.08	□□□□□ -1.76
VMA1	YDL185W	STE2	D6VTK4	431 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	URA3	P03962	267 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	CLN2	P20438	545 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	VPS3	P23643	1011 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	POL4	P25615	582 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	SAC1	P32368	623 aa	Known RBP	4.07	□□□□□ -1.76
VMA1	YDL185W	DOM34	P33309	386 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	DCW1	P36091	449 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	GLY1	P37303	387 aa	Known RBP	4.07	□□□□□ -1.76
VMA1	YDL185W	YBL086C	P38177	466 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	MTG2	P38860	518 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	MEF2	P39677	819 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	UBP9	P39967	754 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	ECM10	P39987	644 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	NUP82	P40368	713 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	AGP3	P43548	558 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	YJL045W	P47052	634 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	ZRG17	P53735	605 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	NOG2	P53742	486 aa	Known RBP	4.07	□□□□□ -1.76
VMA1	YDL185W	TVP15	Q03860	143 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	THP3	Q12049	470 aa	Known RBP	4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms