RNA–Protein interactions for RNA: YBR274W

CHK1, Transcript of Serine/threonine kinase and DNA damage checkpoint effector, yeast

Gene CHK1, Length 1,584 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHK1	YBR274W	PPZ2	P33329	710 aa		4.04	□□□□□ -1.76
CHK1	YBR274W	PES4	P39684	611 aa		4.04	□□□□□ -1.76
CHK1	YBR274W	BDH2	P39713	417 aa		4.04	□□□□□ -1.76
CHK1	YBR274W	RSC8	P43609	557 aa	Known RBP	4.04	□□□□□ -1.76
CHK1	YBR274W	YJR039W	P47107	1121 aa		4.04	□□□□□ -1.76
CHK1	YBR274W	BFA1	P47113	574 aa		4.04	□□□□□ -1.76
CHK1	YBR274W	BRE5	P53741	515 aa	Known RBP	4.04	□□□□□ -1.76
CHK1	YBR274W	LEE1	Q02799	301 aa	Known RBP	4.04	□□□□□ -1.76
CHK1	YBR274W	YML122C	Q03207	126 aa		4.04	□□□□□ -1.76
CHK1	YBR274W	MRD1	Q06106	887 aa	Known RBP	4.04	□□□□□ -1.76
CHK1	YBR274W	YLR001C	Q07895	862 aa		4.04	□□□□□ -1.76
CHK1	YBR274W	PSR2	Q07949	397 aa		4.04	□□□□□ -1.76
CHK1	YBR274W	YOR378W	Q08902	515 aa		4.04	□□□□□ -1.76
CHK1	YBR274W	SUT2	Q12286	268 aa		4.04	□□□□□ -1.76
CHK1	YBR274W	TAF3	Q12297	353 aa		4.04	□□□□□ -1.76
CHK1	YBR274W	RTP1	Q12751	981 aa		4.04	□□□□□ -1.76
CHK1	YBR274W	ECM3	Q99252	613 aa		4.04	□□□□□ -1.76
CHK1	YBR274W	TFC3	P34111	1160 aa		4.03	□□□□□ -1.76
CHK1	YBR274W	YHR202W	P38887	602 aa		4.03	□□□□□ -1.76
CHK1	YBR274W	RRP8	P38961	392 aa	Known RBP	4.03	□□□□□ -1.76
CHK1	YBR274W	VPS8	P39702	1274 aa		4.03	□□□□□ -1.76
CHK1	YBR274W	PIG2	P40187	538 aa		4.03	□□□□□ -1.76
CHK1	YBR274W	YFL040W	P43562	540 aa		4.03	□□□□□ -1.76
CHK1	YBR274W	RPS0B	P46654	252 aa	Known RBP	4.03	□□□□□ -1.76
CHK1	YBR274W	MET13	P53128	600 aa		4.03	□□□□□ -1.76
CHK1	YBR274W	SDA1	P53313	767 aa	Known RBP	4.03	□□□□□ -1.76
CHK1	YBR274W	ISA1	Q07821	250 aa	Predicted RBP	4.03	□□□□□ -1.76
CHK1	YBR274W	MDM20	Q12387	796 aa	Known RBP	4.03	□□□□□ -1.76
CHK1	YBR274W	CHO2	P05374	869 aa	Known RBP	4.02	□□□□□ -1.77
CHK1	YBR274W	ABF1	P14164	731 aa		4.02	□□□□□ -1.77
CHK1	YBR274W	HSC82	P15108	705 aa	Known RBP	4.02	□□□□□ -1.77
CHK1	YBR274W	RPL8A	P17076	256 aa	Known RBP	4.02	□□□□□ -1.77
CHK1	YBR274W	SAM2	P19358	384 aa	Known RBP	4.02	□□□□□ -1.77
CHK1	YBR274W	SEC15	P22224	910 aa		4.02	□□□□□ -1.77
CHK1	YBR274W	ILV6	P25605	309 aa	Known RBP	4.02	□□□□□ -1.77
CHK1	YBR274W	SSH4	P32343	579 aa		4.02	□□□□□ -1.77
CHK1	YBR274W	UTR4	P32626	227 aa		4.02	□□□□□ -1.77
CHK1	YBR274W	UIP5	P36137	443 aa		4.02	□□□□□ -1.77
CHK1	YBR274W	PHO88	P38264	188 aa	Predicted RBP	4.02	□□□□□ -1.77
CHK1	YBR274W	RFC1	P38630	861 aa	Known RBP	4.02	□□□□□ -1.77
CHK1	YBR274W	AFG3	P39925	761 aa		4.02	□□□□□ -1.77
CHK1	YBR274W	YNL195C	P40168	261 aa		4.02	□□□□□ -1.77
CHK1	YBR274W	CCT7	P42943	550 aa	Known RBP	4.02	□□□□□ -1.77
CHK1	YBR274W	SRB7	P47822	140 aa		4.02	□□□□□ -1.77
CHK1	YBR274W	FMP30	Q02883	468 aa		4.02	□□□□□ -1.77
CHK1	YBR274W	SPC19	Q03954	165 aa		4.02	□□□□□ -1.77
CHK1	YBR274W	MLH3	Q12083	715 aa		4.02	□□□□□ -1.77
CHK1	YBR274W	DCS2	Q12123	353 aa		4.02	□□□□□ -1.77
CHK1	YBR274W	USV1	Q12132	391 aa		4.02	□□□□□ -1.77
CHK1	YBR274W	RPN13	O13563	156 aa		4.02	□□□□□ -1.77
CHK1	YBR274W	INH1	P01097	85 aa		4.02	□□□□□ -1.77
CHK1	YBR274W	ERG20	P08524	352 aa	Known RBP	4.02	□□□□□ -1.77
CHK1	YBR274W	THR1	P17423	357 aa	Known RBP	4.02	□□□□□ -1.77
CHK1	YBR274W	PRP28	P23394	588 aa		4.02	□□□□□ -1.77
CHK1	YBR274W	PRO3	P32263	286 aa	Known RBP	4.02	□□□□□ -1.77
CHK1	YBR274W	MYO3	P36006	1272 aa		4.02	□□□□□ -1.77
CHK1	YBR274W	BIT2	P38346	545 aa		4.02	□□□□□ -1.77
CHK1	YBR274W	KSP1	P38691	1029 aa	Known RBP	4.02	□□□□□ -1.77
CHK1	YBR274W	TOM71	P38825	639 aa	Known RBP	4.02	□□□□□ -1.77
CHK1	YBR274W	MGS1	P40151	587 aa		4.02	□□□□□ -1.77
CHK1	YBR274W	UBX4	P54730	416 aa		4.02	□□□□□ -1.77
CHK1	YBR274W	RPS15	Q01855	142 aa	Known RBP	4.02	□□□□□ -1.77
CHK1	YBR274W	TMA17	Q12513	150 aa		4.02	□□□□□ -1.77
CHK1	YBR274W	SPO11	P23179	398 aa		4.01	□□□□□ -1.77
CHK1	YBR274W	BCS1	P32839	456 aa		4.01	□□□□□ -1.77
CHK1	YBR274W	TGL1	P34163	548 aa		4.01	□□□□□ -1.77
CHK1	YBR274W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
CHK1	YBR274W	RIM4	P38741	713 aa		4.01	□□□□□ -1.77
CHK1	YBR274W	TAN1	P53072	289 aa	Predicted RBP	4.01	□□□□□ -1.77
CHK1	YBR274W	APM1	Q00776	475 aa	Predicted RBP	4.01	□□□□□ -1.77
CHK1	YBR274W	MDM1	Q01846	1127 aa		4.01	□□□□□ -1.77
CHK1	YBR274W	YVH1	Q02256	364 aa	Known RBP	4.01	□□□□□ -1.77
CHK1	YBR274W	LGE1	Q02796	332 aa	Known RBP	4.01	□□□□□ -1.77
CHK1	YBR274W	RGC1	Q06108	1083 aa	Known RBP	4.01	□□□□□ -1.77
CHK1	YBR274W	NKP2	Q06162	153 aa		4.01	□□□□□ -1.77
CHK1	YBR274W	VHS3	Q08438	674 aa		4.01	□□□□□ -1.77
CHK1	YBR274W	NDJ1	Q12366	352 aa		4.01	□□□□□ -1.77
CHK1	YBR274W	TUB1	P09733	447 aa	Known RBP	4	□□□□□ -1.77
CHK1	YBR274W	SAM1	P10659	382 aa	Known RBP	4	□□□□□ -1.77
CHK1	YBR274W	RIT1	P23796	513 aa		4	□□□□□ -1.77
CHK1	YBR274W	ANP1	P32629	500 aa		4	□□□□□ -1.77
CHK1	YBR274W	SPH1	Q06160	661 aa		4	□□□□□ -1.77
CHK1	YBR274W	TSR2	Q06672	205 aa	Known RBP	4	□□□□□ -1.77
CHK1	YBR274W	TRE2	Q08693	809 aa		4	□□□□□ -1.77
CHK1	YBR274W	FAP7	Q12055	197 aa	Predicted RBP	4	□□□□□ -1.77
CHK1	YBR274W	RAD50	P12753	1312 aa		4	□□□□□ -1.77
CHK1	YBR274W	NUC1	P08466	329 aa		3.99	□□□□□ -1.77
CHK1	YBR274W	GFD2	P25370	566 aa	Known RBP	3.99	□□□□□ -1.77
CHK1	YBR274W	ADY2	P25613	283 aa		3.99	□□□□□ -1.77
CHK1	YBR274W	FUB1	P25659	250 aa		3.99	□□□□□ -1.77
CHK1	YBR274W	YUR1	P26725	428 aa		3.99	□□□□□ -1.77
CHK1	YBR274W	NTH1	P32356	751 aa		3.99	□□□□□ -1.77
CHK1	YBR274W	PET127	P32606	800 aa		3.99	□□□□□ -1.77
CHK1	YBR274W	GMH1	P36125	273 aa		3.99	□□□□□ -1.77
CHK1	YBR274W	UBS1	P38290	277 aa		3.99	□□□□□ -1.77
CHK1	YBR274W	ECM29	P38737	1868 aa		3.99	□□□□□ -1.77
CHK1	YBR274W	TDA3	P38758	523 aa		3.99	□□□□□ -1.77
CHK1	YBR274W	RIX1	P38883	763 aa	Predicted RBP	3.99	□□□□□ -1.77
CHK1	YBR274W	CRG1	P38892	291 aa	RIP-Chip data	3.99	□□□□□ -1.77	RIP-Chip
CHK1	YBR274W	VPS45	P38932	577 aa		3.99	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms